1z1n - Revision history

OCA at 08:08, 15 May 2024

OCA — Wed, 15 May 2024 08:08:09 GMT

←Older revision		Revision as of 08:08, 15 May 2024
Line 3:		Line 3:
	<StructureSection load='1z1n' size='340' side='right'caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1z1n' size='340' side='right'caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Desulfovibrio_gigas Desulfovibrio~~ gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Megalodesulfovibrio_gigas Megalodesulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:~~ZINC+ION~~'>ZN</scene>, <scene name='pdbligand=~~NAA~~:N-ACETYL-D-~~ALLOSAMINE~~'>~~NAA~~</scene>, <scene name='pdbligand=~~NAG~~:~~N-ACETYL-D-GLUCOSAMINE~~'>~~NAG~~</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [https://pdbe.org/1z1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [https://www.ebi.ac.uk/pdbsum/1z1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1n ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [https://pdbe.org/1z1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [https://www.ebi.ac.uk/pdbsum/1z1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1n ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/T2G9Q2_MEGG1 T2G9Q2_MEGG1]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Desulfovibrio gigas]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Dias, J M~~]]	+	[[Category: Megalodesulfovibrio gigas]]
-	[[Category: ~~Romao, M J~~]]	+	[[Category: Dias JM]]
-	[[Category: ~~Santos-Silva, T~~]]	+	[[Category: Romao MJ]]
-	[[Category: ~~Electron transport~~]]	+	[[Category: Santos-Silva T]]

OCA at 16:35, 3 November 2021

OCA — Wed, 03 Nov 2021 16:35:44 GMT

←Older revision		Revision as of 16:35, 3 November 2021
Line 3:		Line 3:
	<StructureSection load='1z1n' size='340' side='right'caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1z1n' size='340' side='right'caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=~~NAA~~:~~N-ACETYL-D-ALLOSAMINE~~'>~~NAA~~</scene>, <scene name='pdbligand=~~NAG~~:N-ACETYL-D-~~GLUCOSAMINE~~'>~~NAG~~</scene>, <scene name='pdbligand=ZN:~~ZINC+ION~~'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [~~http~~://pdbe.org/1z1n PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1z1n PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1n ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [https://pdbe.org/1z1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [https://www.ebi.ac.uk/pdbsum/1z1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1n ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 17:02, 29 January 2020

OCA — Wed, 29 Jan 2020 17:02:40 GMT

←Older revision		Revision as of 17:02, 29 January 2020
Line 1:		Line 1:

	==Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas==		==Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas==
-	<StructureSection load='1z1n' size='340' side='right' caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='1z1n' size='340' side='right'caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
Line 19:		Line 19:

	==See Also==		==See Also==
-	*[[Cytochrome c\|Cytochrome c]]	+	*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Desulfovibrio gigas]]		[[Category: Desulfovibrio gigas]]
		+	[[Category: Large Structures]]
	[[Category: Dias, J M]]		[[Category: Dias, J M]]
	[[Category: Romao, M J]]		[[Category: Romao, M J]]
	[[Category: Santos-Silva, T]]		[[Category: Santos-Silva, T]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 06:46, 25 April 2018

OCA — Wed, 25 Apr 2018 06:46:59 GMT

←Older revision		Revision as of 06:46, 25 April 2018
Line 1:		Line 1:
		+
	==Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas==		==Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas==
	<StructureSection load='1z1n' size='340' side='right' caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='1z1n' size='340' side='right' caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:~~ZINC+ION~~'>ZN</scene>, <scene name='pdbligand=~~NAA~~:N-ACETYL-D-~~ALLOSAMINE~~'>~~NAA~~</scene>, <scene name='pdbligand=~~NAG~~:~~N-ACETYL-D-GLUCOSAMINE~~'>~~NAG~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://pdbe.org/1z1n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://pdbe.org/1z1n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1n ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1n_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1n_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z1n ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 07:49, 11 September 2015

OCA — Fri, 11 Sep 2015 07:49:24 GMT

←Older revision		Revision as of 07:49, 11 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://pdbe.org/1z1n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 09:25, 8 January 2015

OCA — Thu, 08 Jan 2015 09:25:33 GMT

←Older revision		Revision as of 09:25, 8 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Desulfovibrio gigas]]		[[Category: Desulfovibrio gigas]]
-	[[Category: Dias, J M.]]	+	[[Category: Dias, J M]]
-	[[Category: Romao, M J.]]	+	[[Category: Romao, M J]]
-	[[Category: Santos-Silva, T.]]	+	[[Category: Santos-Silva, T]]
	[[Category: Electron transport]]		[[Category: Electron transport]]

OCA at 20:32, 29 September 2014

OCA — Mon, 29 Sep 2014 20:32:25 GMT

←Older revision		Revision as of 20:32, 29 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1z1n.~~png\|left~~\|200px]]	+	==Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas==
		+	<StructureSection load='1z1n' size='340' side='right' caption='[[1z1n]], [[Resolution\|resolution]] 2.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z1N FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=NAA:N-ACETYL-D-ALLOSAMINE'>NAA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z1n RCSB], [http://www.ebi.ac.uk/pdbsum/1z1n PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1n_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_1z1n\| PDB~~=~~1z1n \| SCENE= }}~~	+	==See Also==
-		+	*[[Cytochrome c\|Cytochrome c]]
-	~~===Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas~~===	+	__TOC__
-		+	</StructureSection>
-	~~{{ABSTRACT_PUBMED_017531266}}~~	+
-		+
-	~~==About this Structure==~~	+
-	[[~~1z1n~~]] ~~is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA].~~	+
	[[Category: Desulfovibrio gigas]]		[[Category: Desulfovibrio gigas]]
	[[Category: Dias, J M.]]		[[Category: Dias, J M.]]

OCA: Protected "1z1n" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 17:26:14 GMT

Protected "1z1n" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:26, 5 January 2013

OCA at 17:26, 5 January 2013

OCA — Sat, 05 Jan 2013 17:26:11 GMT

←Older revision		Revision as of 17:26, 5 January 2013
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-	{{Seed}}
	[[Image:1z1n.png\|left\|200px]]		[[Image:1z1n.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1z1n", creates the "Structure Box" on the page.
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	{{STRUCTURE_1z1n\| PDB=1z1n \| SCENE= }}		{{STRUCTURE_1z1n\| PDB=1z1n \| SCENE= }}

	===Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas===		===Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas===

		+	{{ABSTRACT_PUBMED_017531266}}

	==About this Structure==		==About this Structure==
-	~~1Z1N~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA].	+	[[1z1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA].
	[[Category: Desulfovibrio gigas]]		[[Category: Desulfovibrio gigas]]
	[[Category: Dias, J M.]]		[[Category: Dias, J M.]]
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	[[Category: Santos-Silva, T.]]		[[Category: Santos-Silva, T.]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:24:13 2009''

OCA at 15:24, 17 February 2009

OCA — Tue, 17 Feb 2009 15:24:14 GMT

←Older revision		Revision as of 15:24, 17 February 2009
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-	[[Image:1z1n.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1z1n.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_1z1n\| PDB=1z1n \| SCENE= }}		{{STRUCTURE_1z1n\| PDB=1z1n \| SCENE= }}

-	~~'''~~Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas~~'''~~	+	===Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas===


	==About this Structure==		==About this Structure==
-	1Z1N is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA].	+	1Z1N is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1N OCA].
	[[Category: Desulfovibrio gigas]]		[[Category: Desulfovibrio gigas]]
-	[[Category: Single protein]]
	[[Category: Dias, J M.]]		[[Category: Dias, J M.]]
	[[Category: Romao, M J.]]		[[Category: Romao, M J.]]
	[[Category: Santos-Silva, T.]]		[[Category: Santos-Silva, T.]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3~~ 17:04:~~46 2008~~''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:24:13 2009''