1z6a - Revision history

OCA at 13:39, 13 March 2024

OCA — Wed, 13 Mar 2024 13:39:07 GMT

←Older revision		Revision as of 13:39, 13 March 2024
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	<StructureSection load='1z6a' size='340' side='right'caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1z6a' size='340' side='right'caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Sulso Sulso~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>~~, ~~<scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[1z5z\|1z5z]]~~, ~~[[1z63\|1z63]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [https://pdbe.org/1z6a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [https://www.ebi.ac.uk/pdbsum/1z6a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6a ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [https://pdbe.org/1z6a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [https://www.ebi.ac.uk/pdbsum/1z6a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6a ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q97XQ7_SACS2 Q97XQ7_SACS2]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z6a ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z6a ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	SWI2/SNF2 ATPases remodel chromatin or other DNA:protein complexes by a poorly understood mechanism that involves ATP-dependent DNA translocation and generation of superhelical torsion. Crystal structures of a dsDNA-translocating SWI2/SNF2 ATPase core from Sulfolobus solfataricus reveal two helical SWI2/SNF2 specific subdomains, fused to a DExx box helicase-related ATPase core. Fully base paired duplex DNA binds along a central cleft via both minor groove strands, indicating that SWI2/SNF2 ATPases travel along the dsDNA minor groove without strand separation. A structural switch, linking DNA binding and the active site DExx motif, may account for the stimulation of ATPase activity by dsDNA. Our results suggest that torque in remodeling processes is generated by an ATP-driven screw motion of DNA along the active site cleft. The structures also redefine SWI2/SNF2 functional motifs and uncover unexpected structural correlation of mutations in Cockayne and X-linked mental retardation syndromes.
-
-	X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA.,Durr H, Korner C, Muller M, Hickmann V, Hopfner KP Cell. 2005 May 6;121(3):363-73. PMID:15882619<ref>PMID:15882619</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Helicase 3D structures\|Helicase 3D structures]]		*[[Helicase 3D structures\|Helicase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Sulso~~]]	+	[[Category: Saccharolobus solfataricus P2]]
-	[[Category: Duerr, H]]	+	[[Category: Duerr H]]
-	[[Category: Hickmann, V]]	+	[[Category: Hickmann V]]
-	[[Category: Hopfner~~, K P~~]]	+	[[Category: Hopfner KP]]
-	[[Category: Koerner, C]]	+	[[Category: Koerner C]]
-	[[Category: Mueller, M]]	+	[[Category: Mueller M]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Hydrolase-recombination complex]]~~	+
-	~~[[Category: Recombination~~]]	+

OCA at 09:58, 26 May 2021

OCA — Wed, 26 May 2021 09:58:25 GMT

←Older revision		Revision as of 09:58, 26 May 2021
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	<StructureSection load='1z6a' size='340' side='right'caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1z6a' size='340' side='right'caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1z5z\|1z5z]], [[1z63\|1z63]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [~~http~~://pdbe.org/1z6a PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1z6a PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6a ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [https://pdbe.org/1z6a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [https://www.ebi.ac.uk/pdbsum/1z6a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6a ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:46, 21 August 2019

OCA — Wed, 21 Aug 2019 07:46:10 GMT

←Older revision		Revision as of 07:46, 21 August 2019
Line 1:		Line 1:

	==Sulfolobus solfataricus SWI2/SNF2 ATPase core domain==		==Sulfolobus solfataricus SWI2/SNF2 ATPase core domain==
-	<StructureSection load='1z6a' size='340' side='right' caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>	+	<StructureSection load='1z6a' size='340' side='right'caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z6a_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z6a_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 27:		Line 27:
	</div>		</div>
	<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Helicase 3D structures\|Helicase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Sulso]]		[[Category: Sulso]]
	[[Category: Duerr, H]]		[[Category: Duerr, H]]

OCA at 21:30, 15 November 2017

OCA — Wed, 15 Nov 2017 21:30:28 GMT

←Older revision		Revision as of 21:30, 15 November 2017
Line 1:		Line 1:
		+
	==Sulfolobus solfataricus SWI2/SNF2 ATPase core domain==		==Sulfolobus solfataricus SWI2/SNF2 ATPase core domain==
	<StructureSection load='1z6a' size='340' side='right' caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1z6a' size='340' side='right' caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://pdbe.org/1z6a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://pdbe.org/1z6a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6a ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</div>		</div>
	<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Helicase\|Helicase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:48, 7 February 2016

OCA — Sun, 07 Feb 2016 11:48:40 GMT

←Older revision		Revision as of 11:48, 7 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z6a ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 01:12, 10 September 2015

OCA — Thu, 10 Sep 2015 01:12:30 GMT

←Older revision		Revision as of 01:12, 10 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://pdbe.org/1z6a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1z6a" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 09:43, 8 January 2015

OCA — Thu, 08 Jan 2015 09:43:30 GMT

←Older revision		Revision as of 09:43, 8 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>		<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Sulso]]		[[Category: Sulso]]
-	[[Category: Duerr, H.]]	+	[[Category: Duerr, H]]
-	[[Category: Hickmann, V.]]	+	[[Category: Hickmann, V]]
-	[[Category: Hopfner, K P.]]	+	[[Category: Hopfner, K P]]
-	[[Category: Koerner, C.]]	+	[[Category: Koerner, C]]
-	[[Category: Mueller, M.]]	+	[[Category: Mueller, M]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Hydrolase-recombination complex]]		[[Category: Hydrolase-recombination complex]]
	[[Category: Recombination]]		[[Category: Recombination]]

OCA at 10:32, 3 October 2014

OCA — Fri, 03 Oct 2014 10:32:01 GMT

←Older revision		Revision as of 10:32, 3 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1z6a~~\| ~~PDB~~=1z6a \| ~~SCENE~~= }}	+	==Sulfolobus solfataricus SWI2/SNF2 ATPase core domain==
-	===Sulfolobus solfataricus SWI2/SNF2 ATPase core ~~domain===~~	+	<StructureSection load='1z6a' size='340' side='right' caption='[[1z6a]], [[Resolution\|resolution]] 3.00Å' scene=''>
-	~~{{ABSTRACT_PUBMED_15882619}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Z6A FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1z5z\|1z5z]], [[1z63\|1z63]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6a OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1z6a RCSB], [http://www.ebi.ac.uk/pdbsum/1z6a PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z6a_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	SWI2/SNF2 ATPases remodel chromatin or other DNA:protein complexes by a poorly understood mechanism that involves ATP-dependent DNA translocation and generation of superhelical torsion. Crystal structures of a dsDNA-translocating SWI2/SNF2 ATPase core from Sulfolobus solfataricus reveal two helical SWI2/SNF2 specific subdomains, fused to a DExx box helicase-related ATPase core. Fully base paired duplex DNA binds along a central cleft via both minor groove strands, indicating that SWI2/SNF2 ATPases travel along the dsDNA minor groove without strand separation. A structural switch, linking DNA binding and the active site DExx motif, may account for the stimulation of ATPase activity by dsDNA. Our results suggest that torque in remodeling processes is generated by an ATP-driven screw motion of DNA along the active site cleft. The structures also redefine SWI2/SNF2 functional motifs and uncover unexpected structural correlation of mutations in Cockayne and X-linked mental retardation syndromes.

-	~~==About this Structure==~~	+	X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA.,Durr H, Korner C, Muller M, Hickmann V, Hopfner KP Cell. 2005 May 6;121(3):363-73. PMID:15882619<ref>PMID:15882619</ref>
-	~~[[1z6a]] is a 1 chain structure~~ with ~~sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Sulso Sulso]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=1Z6A OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Helicase\|Helicase]]		*[[Helicase\|Helicase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:015882619</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Sulso]]		[[Category: Sulso]]
	[[Category: Duerr, H.]]		[[Category: Duerr, H.]]

OCA at 08:15, 16 April 2014

OCA — Wed, 16 Apr 2014 08:15:24 GMT

←Older revision		Revision as of 08:15, 16 April 2014
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-	[[Image:1z6a.png\|left\|200px]]
-
	{{STRUCTURE_1z6a\| PDB=1z6a \| SCENE= }}		{{STRUCTURE_1z6a\| PDB=1z6a \| SCENE= }}
-
	===Sulfolobus solfataricus SWI2/SNF2 ATPase core domain===		===Sulfolobus solfataricus SWI2/SNF2 ATPase core domain===
-
	{{ABSTRACT_PUBMED_15882619}}		{{ABSTRACT_PUBMED_15882619}}

	==About this Structure==		==About this Structure==
-	[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sulfolobus_solfataricus Sulfolobus solfataricus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA].	+	[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulso Sulso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA].

	==See Also==		==See Also==
Line 14:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:015882619</ref><references group="xtra"/>	+	<ref group="xtra">PMID:015882619</ref><references group="xtra"/><references/>
-	[[Category: ~~Sulfolobus solfataricus~~]]	+	[[Category: Sulso]]
	[[Category: Duerr, H.]]		[[Category: Duerr, H.]]
	[[Category: Hickmann, V.]]		[[Category: Hickmann, V.]]

OCA at 06:32, 20 October 2012

OCA — Sat, 20 Oct 2012 06:32:36 GMT

←Older revision		Revision as of 06:32, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[1z6a]] is a 1 chain structure ~~of [[Helicase]]~~ with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA].	+	[[1z6a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6A OCA].

	==See Also==		==See Also==