1zc5 - Revision history

OCA at 09:31, 6 December 2023

OCA — Wed, 06 Dec 2023 09:31:32 GMT

←Older revision		Revision as of 09:31, 6 December 2023
Line 1:		Line 1:

	==Structure of the RNA signal essential for translational frameshifting in HIV-1==		==Structure of the RNA signal essential for translational frameshifting in HIV-1==
-	<StructureSection load='1zc5' size='340' side='right'caption='[[1zc5~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='1zc5' size='340' side='right'caption='[[1zc5]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [https://pdbe.org/1zc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1zc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc5 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [https://pdbe.org/1zc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1zc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc5 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 20:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Fourmy, D]]	+	[[Category: Fourmy D]]
-	[[Category: Gaudin, C]]	+	[[Category: Gaudin C]]
-	[[Category: Guittet, E]]	+	[[Category: Guittet E]]
-	[[Category: Mazauric~~, M H~~]]	+	[[Category: Mazauric MH]]
-	[[Category: Traikia, M]]	+	[[Category: Traikia M]]
-	[[Category: Yoshizawa, S]]	+	[[Category: Yoshizawa S]]
-	~~[[Category: Rna]]~~	+
-	~~[[Category: Rna bulged helix~~]]	+

OCA at 08:19, 10 November 2021

OCA — Wed, 10 Nov 2021 08:19:17 GMT

←Older revision		Revision as of 08:19, 10 November 2021
Line 3:		Line 3:
	<StructureSection load='1zc5' size='340' side='right'caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1zc5' size='340' side='right'caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [~~http~~://pdbe.org/1zc5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1zc5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc5 ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [https://pdbe.org/1zc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [https://www.ebi.ac.uk/pdbsum/1zc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc5 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 09:37, 5 February 2020

OCA — Wed, 05 Feb 2020 09:37:53 GMT

←Older revision		Revision as of 09:37, 5 February 2020
Line 1:		Line 1:

	==Structure of the RNA signal essential for translational frameshifting in HIV-1==		==Structure of the RNA signal essential for translational frameshifting in HIV-1==
-	<StructureSection load='1zc5' size='340' side='right' caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='1zc5' size='340' side='right'caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Fourmy, D]]		[[Category: Fourmy, D]]
	[[Category: Gaudin, C]]		[[Category: Gaudin, C]]

OCA at 09:03, 2 May 2018

OCA — Wed, 02 May 2018 09:03:29 GMT

←Older revision		Revision as of 09:03, 2 May 2018
Line 1:		Line 1:
		+
	==Structure of the RNA signal essential for translational frameshifting in HIV-1==		==Structure of the RNA signal essential for translational frameshifting in HIV-1==
	<StructureSection load='1zc5' size='340' side='right' caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='1zc5' size='340' side='right' caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://pdbe.org/1zc5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://pdbe.org/1zc5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zc5 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 11:25, 11 September 2015

OCA — Fri, 11 Sep 2015 11:25:56 GMT

←Older revision		Revision as of 11:25, 11 September 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://pdbe.org/1zc5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 13:		Line 13:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1zc5" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:17, 22 December 2014

OCA — Mon, 22 Dec 2014 06:17:52 GMT

←Older revision		Revision as of 06:17, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 17:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Fourmy, D.]]	+	[[Category: Fourmy, D]]
-	[[Category: Gaudin, C.]]	+	[[Category: Gaudin, C]]
-	[[Category: Guittet, E.]]	+	[[Category: Guittet, E]]
-	[[Category: Mazauric, M H.]]	+	[[Category: Mazauric, M H]]
-	[[Category: Traikia, M.]]	+	[[Category: Traikia, M]]
-	[[Category: Yoshizawa, S.]]	+	[[Category: Yoshizawa, S]]
	[[Category: Rna]]		[[Category: Rna]]
	[[Category: Rna bulged helix]]		[[Category: Rna bulged helix]]

OCA at 06:58, 9 June 2014

OCA — Mon, 09 Jun 2014 06:58:41 GMT

←Older revision		Revision as of 06:58, 9 June 2014
Line 1:		Line 1:
-	[[~~Image~~:1zc5.~~png\|left\|200px~~]]	+	==Structure of the RNA signal essential for translational frameshifting in HIV-1==
		+	<StructureSection load='1zc5' size='340' side='right' caption='[[1zc5]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZC5 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zc5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1zc5 RCSB], [http://www.ebi.ac.uk/pdbsum/1zc5 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Many pathogenic viruses use a programmed -1 translational frameshifting mechanism to regulate synthesis of their structural and enzymatic proteins. Frameshifting is vital for viral replication. A slippery sequence bound at the ribosomal A and P sites as well as a downstream stimulatory RNA structure are essential for frameshifting. Conflicting data have been reported concerning the structure of the downstream RNA signal in human immunodeficiency virus type 1 (HIV-1). Here, the solution structure of the HIV-1 frameshifting RNA signal was solved by heteronuclear NMR spectroscopy. This structure reveals a long hairpin fold with an internal three-nucleotide bulge. The internal loop introduces a bend between the lower and upper helical regions, a structural feature often seen in frameshifting pseudoknots. The NMR structure correlates with chemical probing data. The upper stem rich in conserved G-C Watson-Crick base-pairs is highly stable, whereas the bulge region and the lower stem are more flexible.

-	~~{{STRUCTURE_1zc5\| PDB=1zc5 \| SCENE= }}~~	+	Structure of the RNA signal essential for translational frameshifting in HIV-1.,Gaudin C, Mazauric MH, Traikia M, Guittet E, Yoshizawa S, Fourmy D J Mol Biol. 2005 Jun 24;349(5):1024-35. PMID:15907937<ref>PMID:15907937</ref>

-	~~===Structure~~ of the ~~RNA signal essential for translational frameshifting in HIV-1===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_15907937}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1zc5]] is a 1 chain structure~~. ~~Full experimental information is available from [http://oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=1ZC5 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:015907937<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Fourmy, D.]]		[[Category: Fourmy, D.]]
	[[Category: Gaudin, C.]]		[[Category: Gaudin, C.]]

OCA: Protected "1zc5" [edit=sysop:move=sysop]

OCA — Tue, 14 Aug 2012 18:13:55 GMT

Protected "1zc5" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:13, 14 August 2012

OCA at 18:13, 14 August 2012

OCA — Tue, 14 Aug 2012 18:13:54 GMT

←Older revision		Revision as of 18:13, 14 August 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1zc5.png\|left\|200px]]		[[Image:1zc5.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1zc5", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1zc5\| PDB=1zc5 \| SCENE= }}		{{STRUCTURE_1zc5\| PDB=1zc5 \| SCENE= }}

	===Structure of the RNA signal essential for translational frameshifting in HIV-1===		===Structure of the RNA signal essential for translational frameshifting in HIV-1===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_15907937}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 15907937 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_15907937}}		{{ABSTRACT_PUBMED_15907937}}

	==About this Structure==		==About this Structure==
-	Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA].	+	[[1zc5]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA].

	==Reference==		==Reference==
-	~~Structure of the RNA signal essential for translational frameshifting in HIV-1., Gaudin C, Mazauric MH, Traikia M, Guittet E, Yoshizawa S, Fourmy D, J Mol Biol. 2005 Jun 24;349(5):1024-35.~~ PMID:~~[http://www.ncbi.nlm.nih.gov~~/~~pubmed~~/~~15907937 15907937]~~	+	<ref group="xtra">PMID:015907937</ref><references group="xtra"/>
	[[Category: Fourmy, D.]]		[[Category: Fourmy, D.]]
	[[Category: Gaudin, C.]]		[[Category: Gaudin, C.]]
Line 30:		Line 18:
	[[Category: Traikia, M.]]		[[Category: Traikia, M.]]
	[[Category: Yoshizawa, S.]]		[[Category: Yoshizawa, S.]]
		+	[[Category: Rna]]
	[[Category: Rna bulged helix]]		[[Category: Rna bulged helix]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 04:53:48 2008''

OCA at 01:53, 29 July 2008

OCA — Tue, 29 Jul 2008 01:53:54 GMT

←Older revision		Revision as of 01:53, 29 July 2008
Line 1:		Line 1:
-	[[Image:1zc5.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1zc5.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_1zc5\| PDB=1zc5 \| SCENE= }}		{{STRUCTURE_1zc5\| PDB=1zc5 \| SCENE= }}

-	~~'''~~Structure of the RNA signal essential for translational frameshifting in HIV-1~~'''~~	+	===Structure of the RNA signal essential for translational frameshifting in HIV-1===


-	~~==Overview==~~	+	<!--
-	~~Many pathogenic viruses use a programmed -1 translational frameshifting mechanism~~ to ~~regulate synthesis of their structural and enzymatic proteins. Frameshifting is vital for viral replication. A slippery sequence bound at~~ the ~~ribosomal A and P sites~~ as ~~well as a downstream stimulatory RNA structure are essential for frameshifting~~. ~~Conflicting data have been reported concerning the structure of the downstream RNA signal in human immunodeficiency virus type 1 (HIV-1~~)~~. Here~~, the ~~solution structure of the HIV-1 frameshifting RNA signal was solved by heteronuclear NMR spectroscopy~~. ~~This structure reveals a long hairpin fold with an internal three~~-nucleotide bulge. The internal loop introduces a bend between the lower and upper helical regions, a structural feature often seen in frameshifting pseudoknots. The NMR structure correlates with chemical probing data. The upper stem rich in conserved G-~~C Watson-Crick base-pairs is highly stable, whereas the bulge region and the lower stem are more flexible.~~	+	The line below this paragraph, {{ABSTRACT_PUBMED_15907937}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 15907937 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_15907937}}

	==About this Structure==		==About this Structure==
-	Full ~~crystallographic~~ information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA].	+	Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZC5 OCA].

	==Reference==		==Reference==
Line 27:		Line 31:
	[[Category: Yoshizawa, S.]]		[[Category: Yoshizawa, S.]]
	[[Category: Rna bulged helix]]		[[Category: Rna bulged helix]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 17~~:27:02 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 04:53:48 2008''