1znf - Revision history

OCA at 07:53, 12 July 2023

OCA — Wed, 12 Jul 2023 07:53:37 GMT

←Older revision		Revision as of 07:53, 12 July 2023
Line 1:		Line 1:

	==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==		==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==
-	<StructureSection load='1znf' size='340' side='right'caption='[[1znf~~]], [[NMR_Ensembles_of_Models \| 37 NMR models~~]]' scene=''>	+	<StructureSection load='1znf' size='340' side='right'caption='[[1znf]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~African_clawed_frog African clawed frog~~]. The March 2007 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [https://pdbe.org/1znf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [https://www.ebi.ac.uk/pdbsum/1znf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1znf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [https://pdbe.org/1znf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [https://www.ebi.ac.uk/pdbsum/1znf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1znf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/XFIN_XENLA XFIN_XENLA]] Binds to poly-G sequences in RNA. May function in post-translational regulation processes.	+	[https://www.uniprot.org/uniprot/XFIN_XENLA XFIN_XENLA] Binds to poly-G sequences in RNA. May function in post-translational regulation processes.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: African clawed frog]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
		+	[[Category: Xenopus laevis]]
	[[Category: Zinc Fingers]]		[[Category: Zinc Fingers]]
-	[[Category: Case~~, D A~~]]	+	[[Category: Case DA]]
-	[[Category: Gippert~~, G P~~]]	+	[[Category: Gippert GP]]
-	[[Category: Lee~~, M S~~]]	+	[[Category: Lee MS]]
-	[[Category: Soman~~, K V~~]]	+	[[Category: Soman KV]]
-	[[Category: Wright~~, P E]]~~	+	[[Category: Wright PE]]
-	~~[[Category: Zinc finger dna binding domain~~]]	+

OCA at 06:35, 6 October 2021

OCA — Wed, 06 Oct 2021 06:35:16 GMT

←Older revision		Revision as of 06:35, 6 October 2021
Line 3:		Line 3:
	<StructureSection load='1znf' size='340' side='right'caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>		<StructureSection load='1znf' size='340' side='right'caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. The March 2007 RCSB PDB [~~http~~://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [~~http~~://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. The March 2007 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [~~http~~://pdbe.org/1znf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1znf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1znf ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [https://pdbe.org/1znf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [https://www.ebi.ac.uk/pdbsum/1znf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1znf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/XFIN_XENLA XFIN_XENLA]] Binds to poly-G sequences in RNA. May function in post-translational regulation processes.	+	[[https://www.uniprot.org/uniprot/XFIN_XENLA XFIN_XENLA]] Binds to poly-G sequences in RNA. May function in post-translational regulation processes.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 11:18, 4 December 2019

OCA — Wed, 04 Dec 2019 11:18:40 GMT

←Older revision		Revision as of 11:18, 4 December 2019
Line 1:		Line 1:

	==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==		==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==
-	<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>	+	<StructureSection load='1znf' size='340' side='right'caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>		<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: African clawed frog]]		[[Category: African clawed frog]]
		+	[[Category: Large Structures]]
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
	[[Category: Zinc Fingers]]		[[Category: Zinc Fingers]]

OCA at 07:03, 29 November 2017

OCA — Wed, 29 Nov 2017 07:03:00 GMT

←Older revision		Revision as of 07:03, 29 November 2017
Line 1:		Line 1:
		+
	==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==		==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==
	<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>		<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://pdbe.org/1znf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://pdbe.org/1znf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1znf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 14:25, 11 September 2015

OCA — Fri, 11 Sep 2015 14:25:56 GMT

←Older revision		Revision as of 14:25, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>		<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Xenopus_laevis Xenopus laevis~~]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/African_clawed_frog African clawed frog]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://pdbe.org/1znf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1znf" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: African clawed frog]]
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
-	[[Category: Xenopus laevis]]
	[[Category: Zinc Fingers]]		[[Category: Zinc Fingers]]
	[[Category: Case, D A]]		[[Category: Case, D A]]

OCA at 17:41, 25 December 2014

OCA — Thu, 25 Dec 2014 17:41:25 GMT

←Older revision		Revision as of 17:41, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/XFIN_XENLA XFIN_XENLA]] Binds to poly-G sequences in RNA. May function in post-translational regulation processes.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 24:
	[[Category: Xenopus laevis]]		[[Category: Xenopus laevis]]
	[[Category: Zinc Fingers]]		[[Category: Zinc Fingers]]
-	[[Category: Case, D A.]]	+	[[Category: Case, D A]]
-	[[Category: Gippert, G P.]]	+	[[Category: Gippert, G P]]
-	[[Category: Lee, M S.]]	+	[[Category: Lee, M S]]
-	[[Category: Soman, K V.]]	+	[[Category: Soman, K V]]
-	[[Category: Wright, P E.]]	+	[[Category: Wright, P E]]
	[[Category: Zinc finger dna binding domain]]		[[Category: Zinc finger dna binding domain]]

OCA at 08:26, 8 October 2014

OCA — Wed, 08 Oct 2014 08:26:17 GMT

←Older revision		Revision as of 08:26, 8 October 2014
Line 1:		Line 1:
-	[[~~Image:~~1znf.~~png~~\|~~left~~\|~~200px~~]]	+	==THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN==
		+	<StructureSection load='1znf' size='340' side='right' caption='[[1znf]], [[NMR_Ensembles_of_Models \| 37 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZNF FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1znf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1znf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1znf RCSB], [http://www.ebi.ac.uk/pdbsum/1znf PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The three-dimensional solution structure of a zinc finger nucleic acid binding motif has been determined by nuclear magnetic resonance (NMR) spectroscopy. Spectra of a synthetic peptide corresponding to a single zinc finger from the Xenopus protein Xfin yielded distance and dihedral angle constraints that were used to generate structures from distance geometry and restrained molecular dynamics calculations. The zinc finger is an independently folded domain with a compact globular structure in which the zinc atom is bound by two cysteine and two histidine ligands. The polypeptide backbone fold consists of a well-defined helix, starting as alpha and ending as 3(10) helix, packed against two beta strands that are arranged in a hairpin structure. A high density of basic and polar amino acid side chains on the exposed face of the helix are probably involved in DNA binding.

-	~~{{STRUCTURE_1znf\| PDB=1znf \| SCENE= }}~~	+	Three-dimensional solution structure of a single zinc finger DNA-binding domain.,Lee MS, Gippert GP, Soman KV, Case DA, Wright PE Science. 1989 Aug 11;245(4918):635-7. PMID:2503871<ref>PMID:2503871</ref>

-	~~===THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_2503871}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1znf]] is~~ a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the ~~Month] feature on ''Zinc Fingers'' by David~~ S. ~~Goodsell is [http://dx~~.~~doi.org~~/~~10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:002503871<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
	[[Category: Xenopus laevis]]		[[Category: Xenopus laevis]]

OCA: Protected "1znf" [edit=sysop:move=sysop]

OCA — Sat, 05 Jan 2013 17:10:39 GMT

Protected "1znf" [edit=sysop:move=sysop]

←Older revision

Revision as of 17:10, 5 January 2013

OCA at 17:10, 5 January 2013

OCA — Sat, 05 Jan 2013 17:10:37 GMT

←Older revision		Revision as of 17:10, 5 January 2013
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-	{{Seed}}
	[[Image:1znf.png\|left\|200px]]		[[Image:1znf.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_1znf\| PDB=1znf \| SCENE= }}		{{STRUCTURE_1znf\| PDB=1znf \| SCENE= }}

	===THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN===		===THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN===

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-	<!--
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	{{ABSTRACT_PUBMED_2503871}}		{{ABSTRACT_PUBMED_2503871}}

	==About this Structure==		==About this Structure==
-	~~1ZNF~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA].	+	[[1znf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~2503871~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:002503871</ref><references group="xtra"/>
	[[Category: RCSB PDB Molecule of the Month]]		[[Category: RCSB PDB Molecule of the Month]]
	[[Category: Xenopus laevis]]		[[Category: Xenopus laevis]]
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	[[Category: Wright, P E.]]		[[Category: Wright, P E.]]
	[[Category: Zinc finger dna binding domain]]		[[Category: Zinc finger dna binding domain]]
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OCA at 06:59, 21 January 2010

OCA — Thu, 21 Jan 2010 06:59:45 GMT

←Older revision		Revision as of 06:59, 21 January 2010
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	==About this Structure==		==About this Structure==
-	1ZNF is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. ~~Additional information on 1ZNF is available in a page on~~ [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/~~pdb87_1~~.html Zinc Fingers~~] at the RCSB PDB~~ [http://~~pdb~~.~~rcsb~~.org/~~pdb~~/~~static~~.~~do?p=education_discussion~~/~~molecule_of_the_month~~/~~index.html Molecule of the Month~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA].	+	1ZNF is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. The March 2007 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Zinc Fingers'' by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2007_3 10.2210/rcsb_pdb/mom_2007_3]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZNF OCA].

	==Reference==		==Reference==
-	~~Three-dimensional solution structure of a single zinc finger DNA-binding domain., Lee MS, Gippert GP, Soman KV, Case DA, Wright PE, Science. 1989 Aug 11;245(4918):635-7.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/2503871 2503871]~~	+	<ref group="xtra">PMID:2503871</ref><references group="xtra"/>
-	[[Category: ~~Single protein~~]]	+	[[Category: RCSB PDB Molecule of the Month]]
	[[Category: Xenopus laevis]]		[[Category: Xenopus laevis]]
	[[Category: Zinc Fingers]]		[[Category: Zinc Fingers]]
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	[[Category: Zinc finger dna binding domain]]		[[Category: Zinc finger dna binding domain]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jul 23 11~~:02:~~28 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jan 21 08:59:43 2010''