1ztg - Revision history

OCA at 08:15, 25 October 2023

OCA — Wed, 25 Oct 2023 08:15:28 GMT

←Older revision		Revision as of 08:15, 25 October 2023
Line 3:		Line 3:
	<StructureSection load='1ztg' size='340' side='right'caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1ztg' size='340' side='right'caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~PCBP1 (~~[~~https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=9606 HUMAN])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [https://pdbe.org/1ztg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [https://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ztg ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [https://pdbe.org/1ztg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [https://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ztg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.	+	[https://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Barker, A]]	+	[[Category: Barker A]]
-	[[Category: Leedman~~, P J~~]]	+	[[Category: Leedman PJ]]
-	[[Category: Schmidgerger, J]]	+	[[Category: Schmidgerger J]]
-	[[Category: Sidiqi, M]]	+	[[Category: Sidiqi M]]
-	[[Category: Wilce~~, J A~~]]	+	[[Category: Wilce JA]]
-	[[Category: Wilce~~, M C.J]]~~	+	[[Category: Wilce MCJ]]
-	~~[[Category: Dna]]~~	+
-	~~[[Category: Kh-domain]]~~	+
-	~~[[Category: Kh-motif]]~~	+
-	~~[[Category: Protein-dna complex]]~~	+
-	~~[[Category: Rna binding protein-dna complex~~]]	+

OCA at 08:16, 27 January 2021

OCA — Wed, 27 Jan 2021 08:16:40 GMT

←Older revision		Revision as of 08:16, 27 January 2021
Line 1:		Line 1:

	==human alpha polyC binding protein KH1==		==human alpha polyC binding protein KH1==
-	<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>	+	<StructureSection load='1ztg' size='340' side='right'caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [~~http~~://pdbe.org/1ztg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1ztg ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [https://pdbe.org/1ztg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [https://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ztg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.	+	[[https://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Barker, A]]		[[Category: Barker, A]]
	[[Category: Leedman, P J]]		[[Category: Leedman, P J]]

OCA at 08:53, 2 May 2018

OCA — Wed, 02 May 2018 08:53:57 GMT

←Older revision		Revision as of 08:53, 2 May 2018
Line 1:		Line 1:
		+
	==human alpha polyC binding protein KH1==		==human alpha polyC binding protein KH1==
	<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://pdbe.org/1ztg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://pdbe.org/1ztg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ztg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zt/1ztg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zt/1ztg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ztg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 23:44, 11 September 2015

OCA — Fri, 11 Sep 2015 23:44:40 GMT

←Older revision		Revision as of 23:44, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>		<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://pdbe.org/1ztg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1ztg" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Homo sapiens~~]]	+	[[Category: Human]]
	[[Category: Barker, A]]		[[Category: Barker, A]]
	[[Category: Leedman, P J]]		[[Category: Leedman, P J]]

OCA at 20:59, 25 December 2014

OCA — Thu, 25 Dec 2014 20:59:15 GMT

←Older revision		Revision as of 20:59, 25 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}~~	+	==human alpha polyC binding protein KH1==
-	===human alpha polyC binding protein KH1===	+	<StructureSection load='1ztg' size='340' side='right' caption='[[1ztg]], [[Resolution\|resolution]] 3.00Å' scene=''>
-	~~{{ABSTRACT_PUBMED_22344691}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZTG FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.		[[http://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zt/1ztg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Poly-C-binding proteins are triple KH (hnRNP K homology) domain proteins with specificity for single stranded C-rich RNA and DNA. They play diverse roles in the regulation of protein expression at both transcriptional and translational levels. Here, we analyse the contributions of individual alphaCP1 KH domains to binding C-rich oligonucleotides using biophysical and structural methods. Using surface plasmon resonance (SPR), we demonstrate that KH1 makes the most stable interactions with both RNA and DNA, KH3 binds with intermediate affinity and KH2 only interacts detectibly with DNA. The crystal structure of KH1 bound to a 5'-CCCTCCCT-3' DNA sequence shows a 2:1 protein:DNA stoichiometry and demonstrates a molecular arrangement of KH domains bound to immediately adjacent oligonucleotide target sites. SPR experiments, with a series of poly-C-sequences reveals that cytosine is preferred at all four positions in the oligonucleotide binding cleft and that a C-tetrad binds KH1 with 10 times higher affinity than a C-triplet. The basis for this high affinity interaction is finally detailed with the structure determination of a KH1.W.C54S mutant bound to 5'-ACCCCA-3' DNA sequence. Together, these data establish the lead role of KH1 in oligonucleotide binding by alphaCP1 and reveal the molecular basis of its specificity for a C-rich tetrad.

-	~~==About this Structure==~~	+	Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides.,Yoga YM, Traore DA, Sidiqi M, Szeto C, Pendini NR, Barker A, Leedman PJ, Wilce JA, Wilce MC Nucleic Acids Res. 2012 Feb 16. PMID:22344691<ref>PMID:22344691</ref>
-	~~[[1ztg]] is a 6 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Homo_sapiens Homo sapiens]~~. ~~Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:022344691</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Barker, A.]]	+	[[Category: Barker, A]]
-	[[Category: Leedman, P J.]]	+	[[Category: Leedman, P J]]
-	[[Category: Schmidgerger, J.]]	+	[[Category: Schmidgerger, J]]
-	[[Category: Sidiqi, M.]]	+	[[Category: Sidiqi, M]]
-	[[Category: Wilce, J A.]]	+	[[Category: Wilce, J A]]
-	[[Category: Wilce, M C.J.]]	+	[[Category: Wilce, M C.J]]
	[[Category: Dna]]		[[Category: Dna]]
	[[Category: Kh-domain]]		[[Category: Kh-domain]]

OCA at 04:28, 18 July 2013

OCA — Thu, 18 Jul 2013 04:28:26 GMT

←Older revision		Revision as of 04:28, 18 July 2013
Line 1:		Line 1:
-	[[Image:1ztg.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_1ztg", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}		{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}
-
	===human alpha polyC binding protein KH1===		===human alpha polyC binding protein KH1===
		+	{{ABSTRACT_PUBMED_22344691}}

-		+	==Function==
-	~~<!--~~	+	[[http://www.uniprot.org/uniprot/PCBP1_HUMAN PCBP1_HUMAN]] Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_22344691}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at~~ http://www.~~pubmed~~.~~gov), where 22344691 is the PubMed ID number~~.	+
-	~~-->~~	+
-	~~{{ABSTRACT_PUBMED_22344691}}~~	+

	==About this Structure==		==About this Structure==
Line 22:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:022344691</ref><references group="xtra"/>	+	<ref group="xtra">PMID:022344691</ref><references group="xtra"/><references/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Barker, A.]]		[[Category: Barker, A.]]

OCA: Protected "1ztg" [edit=sysop:move=sysop]

OCA — Thu, 08 Mar 2012 05:09:40 GMT

Protected "1ztg" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:09, 8 March 2012

OCA at 05:09, 8 March 2012

OCA — Thu, 08 Mar 2012 05:09:37 GMT

←Older revision		Revision as of 05:09, 8 March 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1ztg.png\|left\|200px]]		[[Image:1ztg.png\|left\|200px]]

Line 12:		Line 11:
	===human alpha polyC binding protein KH1===		===human alpha polyC binding protein KH1===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22344691}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22344691 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22344691}}

	==About this Structure==		==About this Structure==
-	~~1ZTG~~ is a 6 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA].	+	[[1ztg]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022344691</ref><references group="xtra"/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Barker, A.]]		[[Category: Barker, A.]]
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	[[Category: Wilce, J A.]]		[[Category: Wilce, J A.]]
	[[Category: Wilce, M C.J.]]		[[Category: Wilce, M C.J.]]
		+	[[Category: Dna]]
	[[Category: Kh-domain]]		[[Category: Kh-domain]]
	[[Category: Kh-motif]]		[[Category: Kh-motif]]
	[[Category: Protein-dna complex]]		[[Category: Protein-dna complex]]
-		+	[[Category: Rna binding protein-dna complex]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Wed Feb 18 07:04:04 2009''~~	+

OCA at 05:04, 18 February 2009

OCA — Wed, 18 Feb 2009 05:04:07 GMT

←Older revision		Revision as of 05:04, 18 February 2009
Line 1:		Line 1:
-	[[Image:1ztg.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:1ztg.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}		{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}

-	~~'''~~human alpha polyC binding protein KH1~~'''~~	+	===human alpha polyC binding protein KH1===


	==About this Structure==		==About this Structure==
-	1ZTG is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA].	+	1ZTG is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZTG OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Single protein]]
	[[Category: Barker, A.]]		[[Category: Barker, A.]]
	[[Category: Leedman, P J.]]		[[Category: Leedman, P J.]]
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	[[Category: Kh-motif]]		[[Category: Kh-motif]]
	[[Category: Protein-dna complex]]		[[Category: Protein-dna complex]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3~~ 18:03:~~05 2008~~''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 07:04:04 2009''

OCA at 15:03, 3 May 2008

OCA — Sat, 03 May 2008 15:03:06 GMT

←Older revision		Revision as of 15:03, 3 May 2008
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	[[Image:1ztg.gif\|left\|200px]]		[[Image:1ztg.gif\|left\|200px]]

-	{{Structure	+	<!--
-	\|PDB~~= 1ztg \|SIZE=350\|CAPTION= <~~scene ~~name='initialview01'>1ztg</scene>~~, ~~resolution 3~~.~~00Å~~	+	The line below this paragraph, containing "STRUCTURE_1ztg", creates the "Structure Box" on the page.
-	~~\|SITE=~~	+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	~~\|LIGAND= <scene name='pdbligand=DC:2'-DEOXYCYTIDINE~~-~~5'~~-~~MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene~~>	+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	\|~~ACTIVITY~~=	+	or leave the SCENE parameter empty for the default display.
-	\|~~GENE~~= ~~PCBP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])~~	+	-->
-	~~\|DOMAIN=~~	+	{{STRUCTURE_1ztg\| PDB=1ztg \| SCENE= }}
-	~~\|RELATEDENTRY=~~	+
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ztg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ztg OCA], [http://www.ebi.ac.uk/pdbsum/1ztg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ztg RCSB]</span>	+
-	}}	+

	'''human alpha polyC binding protein KH1'''		'''human alpha polyC binding protein KH1'''
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	[[Category: Wilce, J A.]]		[[Category: Wilce, J A.]]
	[[Category: Wilce, M C.J.]]		[[Category: Wilce, M C.J.]]
-	[[Category: kh-domain]]	+	[[Category: Kh-domain]]
-	[[Category: kh-motif]]	+	[[Category: Kh-motif]]
-	[[Category: ~~protein~~-dna complex]]	+	[[Category: Protein-dna complex]]
-		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 18:03:05 2008''
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Mar 31 01~~:41:23 2008''	+