295d - Revision history

OCA at 09:10, 14 February 2024

OCA — Wed, 14 Feb 2024 09:10:26 GMT

←Older revision		Revision as of 09:10, 14 February 2024
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [https://pdbe.org/295d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [https://www.ebi.ac.uk/pdbsum/295d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [https://pdbe.org/295d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [https://www.ebi.ac.uk/pdbsum/295d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>
	</table>		</table>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	A combined crystal-structure determination and NMR analysis of the octanucleotide d(ATGCGCAT)2 is reported. The X-ray analysis shows that the structure is A-form duplex in crystal state. The NMR study shows that in solution this sequence is B-type. The conformational results from each technique are presented in detail. The implications of these findings in terms of conformational flexibility and ligand binding are discussed.
-
-	Crystal and solution structures of the oligonucleotide d(ATGCGCAT)2: a combined X-ray and NMR study.,Clark GR, Brown DG, Sanderson MR, Chwalinski T, Neidle S, Veal JM, Jones RL, Wilson WD, Zon G, Garman E, et al. Nucleic Acids Res. 1990 Sep 25;18(18):5521-8. PMID:2216724<ref>PMID:2216724</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 295d" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 07:58, 23 August 2023

OCA — Wed, 23 Aug 2023 07:58:44 GMT

←Older revision		Revision as of 07:58, 23 August 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=295D FirstGlance]. <br>		<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=295D FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [https://pdbe.org/295d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [https://www.ebi.ac.uk/pdbsum/295d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [https://pdbe.org/295d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [https://www.ebi.ac.uk/pdbsum/295d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 20:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Brown~~, D G~~]]	+	[[Category: Brown DG]]
-	[[Category: Chwalinski, T]]	+	[[Category: Chwalinski T]]
-	[[Category: Clark~~, G R~~]]	+	[[Category: Clark GR]]
-	[[Category: Garman, E]]	+	[[Category: Garman E]]
-	[[Category: Jones~~, R L~~]]	+	[[Category: Jones RL]]
-	[[Category: Neidle, S]]	+	[[Category: Neidle S]]
-	[[Category: Sanderson~~, M R~~]]	+	[[Category: Sanderson MR]]
-	[[Category: Stuart~~, D I~~]]	+	[[Category: Stuart DI]]
-	[[Category: Veal~~, J M~~]]	+	[[Category: Veal JM]]
-	[[Category: Wilson~~, W D~~]]	+	[[Category: Wilson WD]]
-	[[Category: Zon, G]]	+	[[Category: Zon G]]
-	~~[[Category: A-dna]]~~	+
-	~~[[Category: Dna]]~~	+
-	~~[[Category: Double helix~~]]	+

OCA at 14:34, 17 November 2021

OCA — Wed, 17 Nov 2021 14:34:38 GMT

←Older revision		Revision as of 14:34, 17 November 2021
Line 3:		Line 3:
	<StructureSection load='295d' size='340' side='right'caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='295d' size='340' side='right'caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=295D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=295D FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [~~http~~://pdbe.org/295d PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/295d PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [https://pdbe.org/295d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [https://www.ebi.ac.uk/pdbsum/295d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 05:23, 13 February 2020

OCA — Thu, 13 Feb 2020 05:23:16 GMT

←Older revision		Revision as of 05:23, 13 February 2020
Line 1:		Line 1:

	==CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY==		==CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY==
-	<StructureSection load='295d' size='340' side='right' caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='295d' size='340' side='right'caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>		<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Brown, D G]]		[[Category: Brown, D G]]
	[[Category: Chwalinski, T]]		[[Category: Chwalinski, T]]

OCA at 07:15, 9 May 2018

OCA — Wed, 09 May 2018 07:15:38 GMT

←Older revision		Revision as of 07:15, 9 May 2018
Line 1:		Line 1:
		+
	==CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY==		==CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY==
	<StructureSection load='295d' size='340' side='right' caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='295d' size='340' side='right' caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>		<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [http://pdbe.org/295d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [http://www.ebi.ac.uk/pdbsum/295d PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [http://pdbe.org/295d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [http://www.ebi.ac.uk/pdbsum/295d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=295d ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:06, 9 September 2015

OCA — Wed, 09 Sep 2015 21:06:59 GMT

←Older revision		Revision as of 21:06, 9 September 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>		<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [http://www.ebi.ac.uk/pdbsum/295d PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [http://pdbe.org/295d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [http://www.ebi.ac.uk/pdbsum/295d PDBsum]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 13:		Line 13:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 295d" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 05:49, 22 December 2014

OCA — Mon, 22 Dec 2014 05:49:38 GMT

←Older revision		Revision as of 05:49, 22 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_295d\| PDB=295d \| SCENE= }}~~	+	==CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY==
-	===CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY===	+	<StructureSection load='295d' size='340' side='right' caption='[[295d]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	~~{{ABSTRACT_PUBMED_2216724}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295D FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=295d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=295d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=295d RCSB], [http://www.ebi.ac.uk/pdbsum/295d PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	A combined crystal-structure determination and NMR analysis of the octanucleotide d(ATGCGCAT)2 is reported. The X-ray analysis shows that the structure is A-form duplex in crystal state. The NMR study shows that in solution this sequence is B-type. The conformational results from each technique are presented in detail. The implications of these findings in terms of conformational flexibility and ligand binding are discussed.

-	~~==About this Structure==~~	+	Crystal and solution structures of the oligonucleotide d(ATGCGCAT)2: a combined X-ray and NMR study.,Clark GR, Brown DG, Sanderson MR, Chwalinski T, Neidle S, Veal JM, Jones RL, Wilson WD, Zon G, Garman E, et al. Nucleic Acids Res. 1990 Sep 25;18(18):5521-8. PMID:2216724<ref>PMID:2216724</ref>
-	~~[[295d]] is~~ a ~~1 chain structure~~. ~~Full crystallographic information is available from [http://oca~~.~~weizmann~~.~~ac.il/oca~~-~~bin/ocashort?id=295D OCA]~~.	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:002216724</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
-	[[Category: Brown, D G.]]	+	== References ==
-	[[Category: Chwalinski, T.]]	+	<references/>
-	[[Category: Clark, G R.]]	+	__TOC__
-	[[Category: Garman, E.]]	+	</StructureSection>
-	[[Category: Jones, R L.]]	+	[[Category: Brown, D G]]
-	[[Category: Neidle, S.]]	+	[[Category: Chwalinski, T]]
-	[[Category: Sanderson, M R.]]	+	[[Category: Clark, G R]]
-	[[Category: Stuart, D I.]]	+	[[Category: Garman, E]]
-	[[Category: Veal, J M.]]	+	[[Category: Jones, R L]]
-	[[Category: Wilson, W D.]]	+	[[Category: Neidle, S]]
-	[[Category: Zon, G.]]	+	[[Category: Sanderson, M R]]
		+	[[Category: Stuart, D I]]
		+	[[Category: Veal, J M]]
		+	[[Category: Wilson, W D]]
		+	[[Category: Zon, G]]
	[[Category: A-dna]]		[[Category: A-dna]]
	[[Category: Dna]]		[[Category: Dna]]
	[[Category: Double helix]]		[[Category: Double helix]]

OCA at 08:29, 23 April 2014

OCA — Wed, 23 Apr 2014 08:29:27 GMT

←Older revision		Revision as of 08:29, 23 April 2014
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-	[[Image:295d.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_295d", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_295d\| PDB=295d \| SCENE= }}		{{STRUCTURE_295d\| PDB=295d \| SCENE= }}
-
	===CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY===		===CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_2216724}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 2216724 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_2216724}}		{{ABSTRACT_PUBMED_2216724}}

Line 22:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:002216724</ref><references group="xtra"/>	+	<ref group="xtra">PMID:002216724</ref><references group="xtra"/><references/>
	[[Category: Brown, D G.]]		[[Category: Brown, D G.]]
	[[Category: Chwalinski, T.]]		[[Category: Chwalinski, T.]]

OCA: Protected "295d" [edit=sysop:move=sysop]

OCA — Wed, 22 Feb 2012 06:47:54 GMT

Protected "295d" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:47, 22 February 2012

OCA at 06:47, 22 February 2012

OCA — Wed, 22 Feb 2012 06:47:52 GMT

←Older revision		Revision as of 06:47, 22 February 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:295d.png\|left\|200px]]		[[Image:295d.png\|left\|200px]]

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	==About this Structure==		==About this Structure==
-	Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA].	+	[[295d]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=295D OCA].

	==Reference==		==Reference==
-	Crystal and solution structures of the oligonucleotide d(ATGCGCAT)2: a combined X-ray and NMR study., Clark GR, Brown DG, Sanderson MR, Chwalinski T, Neidle S, Veal JM, Jones RL, Wilson WD, Zon G, Garman E, et al., Nucleic Acids Res. 1990 Sep 25;18(18):5521-8. PMID:~~[http://www.ncbi.nlm.nih.gov~~/~~pubmed~~/~~2216724 2216724]~~	+	<ref group="xtra">PMID:002216724</ref><references group="xtra"/>
	[[Category: Brown, D G.]]		[[Category: Brown, D G.]]
	[[Category: Chwalinski, T.]]		[[Category: Chwalinski, T.]]
Line 36:		Line 35:
	[[Category: Zon, G.]]		[[Category: Zon, G.]]
	[[Category: A-dna]]		[[Category: A-dna]]
		+	[[Category: Dna]]
	[[Category: Double helix]]		[[Category: Double helix]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 12:51:59 2008''