2a10 - Revision history

OCA at 09:10, 14 February 2024

OCA — Wed, 14 Feb 2024 09:10:41 GMT

←Older revision		Revision as of 09:10, 14 February 2024
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	<StructureSection load='2a10' size='340' side='right'caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2a10' size='340' side='right'caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Aphanocapsa_sp~~.~~_(strain_n-1) Aphanocapsa~~ sp. ~~(strain n-1)~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A10 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A10 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[2a18\|2a18]], [[2a1b\|2a1b]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.803Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">ccmK4 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [https://pdbe.org/2a10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [https://www.ebi.ac.uk/pdbsum/2a10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a10 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [https://pdbe.org/2a10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [https://www.ebi.ac.uk/pdbsum/2a10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a10 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/CCMK4_SYNY3 CCMK4_SYNY3]] May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (By similarity).	+	[https://www.uniprot.org/uniprot/CCMK4_SYNY3 CCMK4_SYNY3] May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a10 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a10 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. Genomic sequence databases reveal the widespread occurrence of microcompartments across diverse microbes. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. We report three-dimensional crystal structures of multiple carboxysome shell proteins, revealing a hexameric unit as the basic microcompartment building block and showing how these hexamers assemble to form flat facets of the polyhedral shell. The structures suggest how molecular transport across the shell may be controlled and how structural variations might govern the assembly and architecture of these subcellular compartments.
-
-	Protein structures forming the shell of primitive bacterial organelles.,Kerfeld CA, Sawaya MR, Tanaka S, Nguyen CV, Phillips M, Beeby M, Yeates TO Science. 2005 Aug 5;309(5736):936-8. PMID:16081736<ref>PMID:16081736</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Cytochrome P450 3D structures\|Cytochrome P450 3D structures]]		*[[Cytochrome P450 3D structures\|Cytochrome P450 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Beeby, M]]	+	[[Category: Synechocystis sp. PCC 6803]]
-	[[Category: Kerfeld~~, C A~~]]	+	[[Category: Beeby M]]
-	[[Category: Nguyen~~, C V~~]]	+	[[Category: Kerfeld CA]]
-	[[Category: Phillips, M]]	+	[[Category: Nguyen CV]]
-	[[Category: Sawaya~~, M R~~]]	+	[[Category: Phillips M]]
-	[[Category: Tanaka, S]]	+	[[Category: Sawaya MR]]
-	[[Category: Yeates~~, T O]]~~	+	[[Category: Tanaka S]]
-	~~[[Category: C6 point symmetry]]~~	+	[[Category: Yeates TO]]
-	~~[[Category: Carboxysome]]~~	+
-	~~[[Category: Cyclic hexamer~~]]	+

OCA at 08:23, 27 January 2021

OCA — Wed, 27 Jan 2021 08:23:38 GMT

←Older revision		Revision as of 08:23, 27 January 2021
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	==carboxysome shell protein ccmK4==		==carboxysome shell protein ccmK4==
-	<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='2a10' size='340' side='right'caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2A10 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A10 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2a18\|2a18]], [[2a1b\|2a1b]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [~~http~~://pdbe.org/2a10 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2a10 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2a10 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [https://pdbe.org/2a10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [https://www.ebi.ac.uk/pdbsum/2a10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a10 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/CCMK4_SYNY3 CCMK4_SYNY3]] May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (By similarity).	+	[[https://www.uniprot.org/uniprot/CCMK4_SYNY3 CCMK4_SYNY3]] May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/2a10_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/2a10_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 29:		Line 29:
	</div>		</div>
	<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Cytochrome P450 3D structures\|Cytochrome P450 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Beeby, M]]		[[Category: Beeby, M]]
	[[Category: Kerfeld, C A]]		[[Category: Kerfeld, C A]]

OCA at 11:56, 12 October 2017

OCA — Thu, 12 Oct 2017 11:56:03 GMT

←Older revision		Revision as of 11:56, 12 October 2017
Line 1:		Line 1:
		+
	==carboxysome shell protein ccmK4==		==carboxysome shell protein ccmK4==
	<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://pdbe.org/2a10 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://pdbe.org/2a10 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2a10 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</div>		</div>
	<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Cytochrome P450\|Cytochrome P450]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 15:50, 9 February 2016

OCA — Tue, 09 Feb 2016 15:50:38 GMT

←Older revision		Revision as of 15:50, 9 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a10 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 23:44, 10 September 2015

OCA — Thu, 10 Sep 2015 23:44:32 GMT

←Older revision		Revision as of 23:44, 10 September 2015
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	<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Synechocystis_sp~~. ~~Synechocystis~~ sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A10 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A10 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1143 Synechocystis~~ sp.])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1148 Aphanocapsa sp. (strain N-1)])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://pdbe.org/2a10 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2a10" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 34:		Line 35:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Synechocystis sp]]
	[[Category: Beeby, M]]		[[Category: Beeby, M]]
	[[Category: Kerfeld, C A]]		[[Category: Kerfeld, C A]]

OCA at 07:52, 25 December 2014

OCA — Thu, 25 Dec 2014 07:52:34 GMT

←Older revision		Revision as of 07:52, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A10 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A10 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1143 Synechocystis sp.])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1143 Synechocystis sp.])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CCMK4_SYNY3 CCMK4_SYNY3]] May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Synechocystis sp.]]	+	[[Category: Synechocystis sp]]
-	[[Category: Beeby, M.]]	+	[[Category: Beeby, M]]
-	[[Category: Kerfeld, C A.]]	+	[[Category: Kerfeld, C A]]
-	[[Category: Nguyen, C V.]]	+	[[Category: Nguyen, C V]]
-	[[Category: Phillips, M.]]	+	[[Category: Phillips, M]]
-	[[Category: Sawaya, M R.]]	+	[[Category: Sawaya, M R]]
-	[[Category: Tanaka, S.]]	+	[[Category: Tanaka, S]]
-	[[Category: Yeates, T O.]]	+	[[Category: Yeates, T O]]
	[[Category: C6 point symmetry]]		[[Category: C6 point symmetry]]
	[[Category: Carboxysome]]		[[Category: Carboxysome]]
	[[Category: Cyclic hexamer]]		[[Category: Cyclic hexamer]]

OCA at 03:12, 29 September 2014

OCA — Mon, 29 Sep 2014 03:12:46 GMT

←Older revision		Revision as of 03:12, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2a10.~~png~~\|~~left~~\|200px]]	+	==carboxysome shell protein ccmK4==
		+	<StructureSection load='2a10' size='340' side='right' caption='[[2a10]], [[Resolution\|resolution]] 1.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2A10 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2a18\|2a18]], [[2a1b\|2a1b]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1143 Synechocystis sp.])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2a10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a10 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2a10 RCSB], [http://www.ebi.ac.uk/pdbsum/2a10 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a1/2a10_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Bacterial microcompartments are primitive organelles composed entirely of protein subunits. Genomic sequence databases reveal the widespread occurrence of microcompartments across diverse microbes. The prototypical bacterial microcompartment is the carboxysome, a protein shell for sequestering carbon fixation reactions. We report three-dimensional crystal structures of multiple carboxysome shell proteins, revealing a hexameric unit as the basic microcompartment building block and showing how these hexamers assemble to form flat facets of the polyhedral shell. The structures suggest how molecular transport across the shell may be controlled and how structural variations might govern the assembly and architecture of these subcellular compartments.

-	~~{{STRUCTURE_2a10\| PDB=2a10 \| SCENE= }}~~	+	Protein structures forming the shell of primitive bacterial organelles.,Kerfeld CA, Sawaya MR, Tanaka S, Nguyen CV, Phillips M, Beeby M, Yeates TO Science. 2005 Aug 5;309(5736):936-8. PMID:16081736<ref>PMID:16081736</ref>

-	~~===carboxysome shell protein ccmK4===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_16081736}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2a10]] is~~ a ~~6 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Synechocystis_sp~~. ~~Synechocystis sp.]. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA].~~	+

	==See Also==		==See Also==
	*[[Cytochrome P450\|Cytochrome P450]]		*[[Cytochrome P450\|Cytochrome P450]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:016081736<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Synechocystis sp.]]		[[Category: Synechocystis sp.]]
	[[Category: Beeby, M.]]		[[Category: Beeby, M.]]

OCA at 14:21, 20 October 2012

OCA — Sat, 20 Oct 2012 14:21:19 GMT

←Older revision		Revision as of 14:21, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2a10]] is a 6 chain structure ~~of [[Cytochrome P450]]~~ with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA].	+	[[2a10]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA].

	==See Also==		==See Also==

OCA at 14:53, 26 July 2012

OCA — Thu, 26 Jul 2012 14:53:33 GMT

←Older revision		Revision as of 14:53, 26 July 2012
Line 1:		Line 1:
	[[Image:2a10.png\|left\|200px]]		[[Image:2a10.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2a10", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2a10\| PDB=2a10 \| SCENE= }}		{{STRUCTURE_2a10\| PDB=2a10 \| SCENE= }}

	===carboxysome shell protein ccmK4===		===carboxysome shell protein ccmK4===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_16081736}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 16081736 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_16081736}}		{{ABSTRACT_PUBMED_16081736}}

	==About this Structure==		==About this Structure==
-	[[2a10]] is a 6 chain structure of [[Cytochrome P450]] with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp.~~_pcc_6803~~ Synechocystis sp. ~~pcc 6803~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA].	+	[[2a10]] is a 6 chain structure of [[Cytochrome P450]] with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A10 OCA].

	==See Also==		==See Also==
-	*[[Cytochrome P450]]	+	*[[Cytochrome P450\|Cytochrome P450]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16081736~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016081736</ref><references group="xtra"/>
-	[[Category: Synechocystis sp. ~~pcc 6803~~]]	+	[[Category: Synechocystis sp.]]
	[[Category: Beeby, M.]]		[[Category: Beeby, M.]]
	[[Category: Kerfeld, C A.]]		[[Category: Kerfeld, C A.]]

OCA: Protected "2a10" [edit=sysop:move=sysop]

OCA — Sun, 26 Dec 2010 20:37:42 GMT

Protected "2a10" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:37, 26 December 2010