2aq1 - Revision history

OCA at 11:17, 22 May 2024

OCA — Wed, 22 May 2024 11:17:15 GMT

←Older revision		Revision as of 11:17, 22 May 2024
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	<StructureSection load='2aq1' size='340' side='right'caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2aq1' size='340' side='right'caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885~~] and [https://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">entC3 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [https://pdbe.org/2aq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [https://www.ebi.ac.uk/pdbsum/2aq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [https://pdbe.org/2aq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [https://www.ebi.ac.uk/pdbsum/2aq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~ENTC3_STAAU ENTC3_STAAU~~]~~] Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death.~~	+	[https://www.uniprot.org/uniprot/TVB5_MOUSE TVB5_MOUSE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lk3 transgenic mice~~]]	+	[[Category: Mus musculus]]
-	[[Category: Cho, S]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: Guan, R]]	+	[[Category: Cho S]]
-	[[Category: Kerzic~~, M C~~]]	+	[[Category: Guan R]]
-	[[Category: Kieke~~, M C~~]]	+	[[Category: Kerzic MC]]
-	[[Category: Kranz~~, D M~~]]	+	[[Category: Kieke MC]]
-	[[Category: Mariuzza~~, R A~~]]	+	[[Category: Kranz DM]]
-	[[Category: Sundberg~~, E J~~]]	+	[[Category: Mariuzza RA]]
-	[[Category: Swaminathan~~, C P~~]]	+	[[Category: Sundberg EJ]]
-	[[Category: Yang, J]]	+	[[Category: Swaminathan CP]]
-	~~[[Category: Immune system]]~~	+	[[Category: Yang J]]
-	~~[[Category: Staphylococcal enterotoxin c3]]~~	+
-	~~[[Category: Superantigen]]~~	+
-	~~[[Category: T-cell receptor~~]]	+

OCA at 08:35, 27 January 2021

OCA — Wed, 27 Jan 2021 08:35:47 GMT

←Older revision		Revision as of 08:35, 27 January 2021
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	==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==		==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==
-	<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='2aq1' size='340' side='right'caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885] and [~~http~~://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885] and [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [~~http~~://pdbe.org/2aq1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2aq1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [https://pdbe.org/2aq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [https://www.ebi.ac.uk/pdbsum/2aq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/ENTC3_STAAU ENTC3_STAAU]] Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death.	+	[[https://www.uniprot.org/uniprot/ENTC3_STAAU ENTC3_STAAU]] Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aq1_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aq1_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq1 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[T-cell receptor 3D structures\|T-cell receptor 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]
	[[Category: Cho, S]]		[[Category: Cho, S]]

OCA at 13:40, 12 October 2017

OCA — Thu, 12 Oct 2017 13:40:45 GMT

←Older revision		Revision as of 13:40, 12 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==		==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==
	<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>
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	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://pdbe.org/2aq1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://pdbe.org/2aq1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq1 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[T-cell receptor\|T-cell receptor]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 17:02, 9 February 2016

OCA — Tue, 09 Feb 2016 17:02:37 GMT

←Older revision		Revision as of 17:02, 9 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 00:20, 11 September 2015

OCA — Fri, 11 Sep 2015 00:20:19 GMT

←Older revision		Revision as of 00:20, 11 September 2015
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	<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Mus_musculus Mus musculus~~] and [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus aureus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885] and [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 ~~Staphylococcus~~ aureus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://pdbe.org/2aq1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Mus musculus]]~~	+	[[Category: Lk3 transgenic mice]]
-	~~[[Category: Staphylococcus aureus~~]]	+
	[[Category: Cho, S]]		[[Category: Cho, S]]
	[[Category: Guan, R]]		[[Category: Guan, R]]

OCA at 08:15, 25 December 2014

OCA — Thu, 25 Dec 2014 08:15:26 GMT

←Older revision		Revision as of 08:15, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/ENTC3_STAAU ENTC3_STAAU]] Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 26:
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
-	[[Category: Cho, S.]]	+	[[Category: Cho, S]]
-	[[Category: Guan, R.]]	+	[[Category: Guan, R]]
-	[[Category: Kerzic, M C.]]	+	[[Category: Kerzic, M C]]
-	[[Category: Kieke, M C.]]	+	[[Category: Kieke, M C]]
-	[[Category: Kranz, D M.]]	+	[[Category: Kranz, D M]]
-	[[Category: Mariuzza, R A.]]	+	[[Category: Mariuzza, R A]]
-	[[Category: Sundberg, E J.]]	+	[[Category: Sundberg, E J]]
-	[[Category: Swaminathan, C P.]]	+	[[Category: Swaminathan, C P]]
-	[[Category: Yang, J.]]	+	[[Category: Yang, J]]
	[[Category: Immune system]]		[[Category: Immune system]]
	[[Category: Staphylococcal enterotoxin c3]]		[[Category: Staphylococcal enterotoxin c3]]
	[[Category: Superantigen]]		[[Category: Superantigen]]
	[[Category: T-cell receptor]]		[[Category: T-cell receptor]]

OCA at 01:53, 30 September 2014

OCA — Tue, 30 Sep 2014 01:53:58 GMT

←Older revision		Revision as of 01:53, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2aq1.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==
		+	<StructureSection load='2aq1' size='340' side='right' caption='[[2aq1]], [[Resolution\|resolution]] 2.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQ1 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jck\|1jck]], [[2apb\|2apb]], [[2apf\|2apf]], [[2apt\|2apt]], [[2apv\|2apv]], [[2apw\|2apw]], [[2apx\|2apx]], [[2aq2\|2aq2]], [[2aq3\|2aq3]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2aq1 RCSB], [http://www.ebi.ac.uk/pdbsum/2aq1 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aq1_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_2aq1\| PDB~~=~~2aq1 \| SCENE~~= }}	+	==See Also==
-		+	*[[T-cell receptor\|T-cell receptor]]
-	==~~=Crystal structure of~~ T-cell receptor ~~V beta domain variant complexed with superantigen SEC3 mutant===~~	+	__TOC__
-		+	</StructureSection>
-		+
-	~~==About this Structure==~~	+
-	~~[[2aq1~~]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA].	+
-		+
-	~~==Reference==~~	+
-	<~~ref group="xtra">PMID:016338399</ref><references group="xtra"~~/>	+
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]

OCA: Protected "2aq1" [edit=sysop:move=sysop]

OCA — Sun, 06 Jan 2013 11:07:39 GMT

Protected "2aq1" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:07, 6 January 2013

OCA at 11:07, 6 January 2013

OCA — Sun, 06 Jan 2013 11:07:35 GMT

←Older revision		Revision as of 11:07, 6 January 2013
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-	{{Seed}}
	[[Image:2aq1.png\|left\|200px]]		[[Image:2aq1.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2aq1", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2aq1\| PDB=2aq1 \| SCENE= }}		{{STRUCTURE_2aq1\| PDB=2aq1 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2AQ1~~ is a 8 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA].	+	[[2aq1]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16338399~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016338399</ref><references group="xtra"/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
Line 29:		Line 22:
	[[Category: Swaminathan, C P.]]		[[Category: Swaminathan, C P.]]
	[[Category: Yang, J.]]		[[Category: Yang, J.]]
		+	[[Category: Immune system]]
	[[Category: Staphylococcal enterotoxin c3]]		[[Category: Staphylococcal enterotoxin c3]]
	[[Category: Superantigen]]		[[Category: Superantigen]]
	[[Category: T-cell receptor]]		[[Category: T-cell receptor]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:23:07 2009''

OCA at 09:23, 17 February 2009

OCA — Tue, 17 Feb 2009 09:23:08 GMT

←Older revision		Revision as of 09:23, 17 February 2009
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	2AQ1 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA].	+	2AQ1 is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ1 OCA].

	==Reference==		==Reference==
-	~~The nitty-gritty of protein interactions., Schreiber G, Structure. 2005 Dec;13(12):1737-8.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/16338399 16338399]~~	+	<ref group="xtra">PMID:16338399</ref><references group="xtra"/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Single protein]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Cho, S.]]		[[Category: Cho, S.]]
Line 34:		Line 33:
	[[Category: T-cell receptor]]		[[Category: T-cell receptor]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Jul 28 15~~:27:~~58 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:23:07 2009''