2bon - Revision history

OCA at 09:18, 9 May 2024

OCA — Thu, 09 May 2024 09:18:17 GMT

←Older revision		Revision as of 09:18, 9 May 2024
Line 3:		Line 3:
	<StructureSection load='2bon' size='340' side='right'caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2bon' size='340' side='right'caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecobd Ecobd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [https://pdbe.org/2bon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [https://www.ebi.ac.uk/pdbsum/2bon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bon ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [https://pdbe.org/2bon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [https://www.ebi.ac.uk/pdbsum/2bon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bon ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/YEGS_ECOLI YEGS_ECOLI]] In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown.[HAMAP-Rule:MF_01377]	+	[https://www.uniprot.org/uniprot/YEGS_ECOLI YEGS_ECOLI] In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown.[HAMAP-Rule:MF_01377]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Ecobd]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bakali~~, H M~~]]	+	[[Category: Bakali HM]]
-	[[Category: Hallberg~~, B M~~]]	+	[[Category: Hallberg BM]]
-	[[Category: Herman~~, M D~~]]	+	[[Category: Herman MD]]
-	[[Category: Johnson~~, K A~~]]	+	[[Category: Johnson KA]]
-	[[Category: Nordlund, P]]	+	[[Category: Nordlund P]]
-	~~[[Category: Dag kinase]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 13:14, 24 November 2021

OCA — Wed, 24 Nov 2021 13:14:52 GMT

←Older revision		Revision as of 13:14, 24 November 2021
Line 3:		Line 3:
	<StructureSection load='2bon' size='340' side='right'caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2bon' size='340' side='right'caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2BON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [~~http~~://pdbe.org/2bon PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2bon PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2bon ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [https://pdbe.org/2bon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [https://www.ebi.ac.uk/pdbsum/2bon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bon ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/YEGS_ECOLI YEGS_ECOLI]] In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown.[HAMAP-Rule:MF_01377]	+	[[https://www.uniprot.org/uniprot/YEGS_ECOLI YEGS_ECOLI]] In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown.[HAMAP-Rule:MF_01377]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 08:18, 19 February 2020

OCA — Wed, 19 Feb 2020 08:18:21 GMT

←Older revision		Revision as of 08:18, 19 February 2020
Line 1:		Line 1:

	==Structure of an Escherichia coli lipid kinase (YegS)==		==Structure of an Escherichia coli lipid kinase (YegS)==
-	<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='2bon' size='340' side='right'caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Ecobd]]		[[Category: Ecobd]]
		+	[[Category: Large Structures]]
	[[Category: Bakali, H M]]		[[Category: Bakali, H M]]
	[[Category: Hallberg, B M]]		[[Category: Hallberg, B M]]

OCA at 06:50, 16 May 2018

OCA — Wed, 16 May 2018 06:50:22 GMT

←Older revision		Revision as of 06:50, 16 May 2018
Line 1:		Line 1:
-	==~~STRUCTURE OF AN ESCHERICHIA COLI LIPID KINASE~~ (~~YEGS~~)==	+
		+	==Structure of an Escherichia coli lipid kinase (YegS)==
	<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://pdbe.org/2bon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://pdbe.org/2bon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bon ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/2bon_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/2bon_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 13:52, 8 February 2016

OCA — Mon, 08 Feb 2016 13:52:15 GMT

←Older revision		Revision as of 13:52, 8 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bon ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 12:11, 10 September 2015

OCA — Thu, 10 Sep 2015 12:11:59 GMT

←Older revision		Revision as of 12:11, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://pdbe.org/2bon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2bon" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecobd]]
	[[Category: Bakali, H M]]		[[Category: Bakali, H M]]
	[[Category: Hallberg, B M]]		[[Category: Hallberg, B M]]

OCA at 23:47, 24 December 2014

OCA — Wed, 24 Dec 2014 23:47:58 GMT

←Older revision		Revision as of 23:47, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/YEGS_ECOLI YEGS_ECOLI]] In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown.[HAMAP-Rule:MF_01377]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Bakali, H M.]]	+	[[Category: Bakali, H M]]
-	[[Category: Hallberg, B M.]]	+	[[Category: Hallberg, B M]]
-	[[Category: Herman, M D.]]	+	[[Category: Herman, M D]]
-	[[Category: Johnson, K A.]]	+	[[Category: Johnson, K A]]
-	[[Category: Nordlund, P.]]	+	[[Category: Nordlund, P]]
	[[Category: Dag kinase]]		[[Category: Dag kinase]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 02:10, 30 September 2014

OCA — Tue, 30 Sep 2014 02:10:49 GMT

←Older revision		Revision as of 02:10, 30 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2bon.~~png\|left~~\|200px]]	+	==STRUCTURE OF AN ESCHERICHIA COLI LIPID KINASE (YEGS)==
		+	<StructureSection load='2bon' size='340' side='right' caption='[[2bon]], [[Resolution\|resolution]] 1.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BON FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bon RCSB], [http://www.ebi.ac.uk/pdbsum/2bon PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/2bon_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The human lipid kinase family controls cell proliferation, differentiation, and tumorigenesis and includes diacylglycerol kinases, sphingosine kinases, and ceramide kinases. YegS is an Escherichia coli protein with significant sequence homology to the catalytic domain of the human lipid kinases. We have solved the crystal structure of YegS and shown that it is a lipid kinase with phosphatidylglycerol kinase activity. The crystal structure reveals a two-domain protein with significant structural similarity to a family of NAD kinases. The active site is located in the interdomain cleft formed by four conserved sequence motifs. Surprisingly, the structure reveals a novel metal binding site composed of residues conserved in most lipid kinases.

-	~~{{STRUCTURE_2bon\| PDB=2bon \| SCENE= }}~~	+	Crystal structure of YegS, a homologue to the mammalian diacylglycerol kinases, reveals a novel regulatory metal binding site.,Bakali HM, Herman MD, Johnson KA, Kelly AA, Wieslander A, Hallberg BM, Nordlund P J Biol Chem. 2007 Jul 6;282(27):19644-52. Epub 2007 Mar 11. PMID:17351295<ref>PMID:17351295</ref>

-	~~===STRUCTURE OF AN ESCHERICHIA COLI LIPID KINASE (YEGS)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17351295}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2bon]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:017351295<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Bakali, H M.]]		[[Category: Bakali, H M.]]

OCA: Protected "2bon" [edit=sysop:move=sysop]

OCA — Sun, 06 Jan 2013 11:23:24 GMT

Protected "2bon" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:23, 6 January 2013

OCA at 11:23, 6 January 2013

OCA — Sun, 06 Jan 2013 11:23:20 GMT

←Older revision		Revision as of 11:23, 6 January 2013
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-	{{Seed}}
	[[Image:2bon.png\|left\|200px]]		[[Image:2bon.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2bon", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2bon\| PDB=2bon \| SCENE= }}		{{STRUCTURE_2bon\| PDB=2bon \| SCENE= }}

	===STRUCTURE OF AN ESCHERICHIA COLI LIPID KINASE (YEGS)===		===STRUCTURE OF AN ESCHERICHIA COLI LIPID KINASE (YEGS)===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17351295}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17351295 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_17351295}}		{{ABSTRACT_PUBMED_17351295}}

	==About this Structure==		==About this Structure==
-	~~2BON~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA].	+	[[2bon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BON OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17351295~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017351295</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Bakali, H M.]]		[[Category: Bakali, H M.]]
Line 30:		Line 18:
	[[Category: Johnson, K A.]]		[[Category: Johnson, K A.]]
	[[Category: Nordlund, P.]]		[[Category: Nordlund, P.]]
-	[[Category: ~~Lipid~~ kinase~~,dag kinase,atp-binding~~]]	+	[[Category: Dag kinase]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 23:06:37 2009''