2cmz - Revision history

OCA: Redirecting to 5i2m

OCA — Fri, 26 Feb 2016 17:46:14 GMT

Redirecting to 5i2m

←Older revision		Revision as of 17:46, 26 February 2016
Line 1:		Line 1:
-	~~==CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION==~~	+	#REDIRECT [[5i2m]] This PDB entry is obsolete and replaced by 5i2m
-	~~<StructureSection load='2cmz' size='340' side='right' caption='~~[[~~2cmz]], [[Resolution\|resolution]] 2.40Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[2cmz~~]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>	+
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://pdbe.org/2cmz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>	+
-	~~</table>~~	+
-	~~== Function ==~~	+
-	[[http://www.uniprot.org/uniprot/GLYCO_VSIVG GLYCO_VSIVG]] Attaches the virus to host cellular receptor, inducing clathrin-dependent endocytosis of the virion. In the endosome, the acidic pH induces conformational changes in the glycoprotein trimer, which trigger fusion between virus and ~~endosomal membrane. In neurons, neo-synthesized glycoproteins are sorted to the dendrites, where the virus buds (By similarity).~~	+
-	~~== Evolutionary Conservation ==~~	+
-	~~[[Image:Consurf_key_small.gif\|200px\|right]]~~	+
-	~~Check<jmol>~~	+
-	~~<jmolCheckbox>~~	+
-	~~<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/2cmz_consurf.spt"</scriptWhenChecked>~~	+
-	~~<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>~~	+
-	~~<text>to colour the structure~~ by ~~Evolutionary Conservation</text>~~	+
-	~~</jmolCheckbox>~~	+
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].	+
-	~~<div style="clear:both"></div>~~	+
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	The vesicular stomatitis virus has an atypical membrane fusion glycoprotein (G) exhibiting a pH-dependent equilibrium between two forms at the virus surface. Membrane fusion is triggered during the transition from the high- to low-pH form. The structure of G in its low-pH form shows the classic hairpin conformation observed in all other fusion proteins in their postfusion conformation, in spite of a novel fold combining features of fusion proteins from classes I and II. The structure provides a framework for understanding the reversibility of the G conformational change. Unexpectedly, G is homologous to gB of herpesviruses, which raises important questions on viral evolution.	+
-		+
-	Crystal structure of the low-pH form of the vesicular stomatitis virus glycoprotein G.,Roche S, Bressanelli S, Rey FA, Gaudin Y Science. 2006 Jul 14;313(5784):187-91. PMID:16840692<ref>PMID:16840692</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 2cmz" style="background-color:#fffaf0;"></div>~~	+
-	~~== References ==~~	+
-	~~<references/>~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Vesicular stomatitis indiana virus]]~~	+
-	~~[[Category: Bressanelli, S]]~~	+
-	~~[[Category: Roche, S]]~~	+
-	~~[[Category: Envelope protein]]~~	+
-	~~[[Category: Glycoprotein]]~~	+
-	~~[[Category: Lipoprotein]]~~	+
-	~~[[Category: Membrane]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Transmembrane]]~~	+

OCA at 14:22, 11 September 2015

OCA — Fri, 11 Sep 2015 14:22:27 GMT

←Older revision		Revision as of 14:22, 11 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://pdbe.org/2cmz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GLYCO_VSIVG GLYCO_VSIVG]] Attaches the virus to host cellular receptor, inducing clathrin-dependent endocytosis of the virion. In the endosome, the acidic pH induces conformational changes in the glycoprotein trimer, which trigger fusion between virus and endosomal membrane. In neurons, neo-synthesized glycoproteins are sorted to the dendrites, where the virus buds (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2cmz" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 17:34, 15 January 2015

OCA — Thu, 15 Jan 2015 17:34:14 GMT

←Older revision		Revision as of 17:34, 15 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Vesicular stomatitis indiana virus]]		[[Category: Vesicular stomatitis indiana virus]]
-	[[Category: Bressanelli, S.]]	+	[[Category: Bressanelli, S]]
-	[[Category: Roche, S.]]	+	[[Category: Roche, S]]
	[[Category: Envelope protein]]		[[Category: Envelope protein]]
	[[Category: Glycoprotein]]		[[Category: Glycoprotein]]

OCA at 10:40, 3 October 2014

OCA — Fri, 03 Oct 2014 10:40:26 GMT

←Older revision		Revision as of 10:40, 3 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}~~	+	==CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION==
-	===CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION===	+	<StructureSection load='2cmz' size='340' side='right' caption='[[2cmz]], [[Resolution\|resolution]] 2.40Å' scene=''>
-	{{~~ABSTRACT_PUBMED_16840692~~}}	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CMZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/2cmz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The vesicular stomatitis virus has an atypical membrane fusion glycoprotein (G) exhibiting a pH-dependent equilibrium between two forms at the virus surface. Membrane fusion is triggered during the transition from the high- to low-pH form. The structure of G in its low-pH form shows the classic hairpin conformation observed in all other fusion proteins in their postfusion conformation, in spite of a novel fold combining features of fusion proteins from classes I and II. The structure provides a framework for understanding the reversibility of the G conformational change. Unexpectedly, G is homologous to gB of herpesviruses, which raises important questions on viral evolution.

-	~~==About this Structure==~~	+	Crystal structure of the low-pH form of the vesicular stomatitis virus glycoprotein G.,Roche S, Bressanelli S, Rey FA, Gaudin Y Science. 2006 Jul 14;313(5784):187-91. PMID:16840692<ref>PMID:16840692</ref>
-	~~[[2cmz]] is a 3 chain~~ structure ~~with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular~~ stomatitis ~~indiana~~ virus]. ~~Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann.ac.il~~/~~oca-bin/ocashort?id=2CMZ OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:016840692</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Vesicular stomatitis indiana virus]]		[[Category: Vesicular stomatitis indiana virus]]
	[[Category: Bressanelli, S.]]		[[Category: Bressanelli, S.]]

OCA at 08:26, 23 April 2014

OCA — Wed, 23 Apr 2014 08:26:46 GMT

←Older revision		Revision as of 08:26, 23 April 2014
Line 1:		Line 1:
-	[[Image:2cmz.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_2cmz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}		{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}
-
	===CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION===		===CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_16840692}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 16840692 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_16840692}}		{{ABSTRACT_PUBMED_16840692}}

Line 22:		Line 7:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:016840692</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016840692</ref><references group="xtra"/><references/>
	[[Category: Vesicular stomatitis indiana virus]]		[[Category: Vesicular stomatitis indiana virus]]
	[[Category: Bressanelli, S.]]		[[Category: Bressanelli, S.]]

OCA: Protected "2cmz" [edit=sysop:move=sysop]

OCA — Wed, 24 Aug 2011 05:11:54 GMT

Protected "2cmz" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:11, 24 August 2011

OCA at 05:11, 24 August 2011

OCA — Wed, 24 Aug 2011 05:11:53 GMT

←Older revision		Revision as of 05:11, 24 August 2011
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2cmz.png\|left\|200px]]		[[Image:2cmz.png\|left\|200px]]

Line 20:		Line 19:

	==About this Structure==		==About this Structure==
-	~~2CMZ~~ is a 3 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA].	+	[[2cmz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16840692~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016840692</ref><references group="xtra"/>
	[[Category: Vesicular stomatitis indiana virus]]		[[Category: Vesicular stomatitis indiana virus]]
	[[Category: Bressanelli, S.]]		[[Category: Bressanelli, S.]]
Line 33:		Line 32:
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
	[[Category: Transmembrane]]		[[Category: Transmembrane]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:27:38 2009''

OCA at 22:27, 17 February 2009

OCA — Tue, 17 Feb 2009 22:27:39 GMT

←Older revision		Revision as of 22:27, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2CMZ is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA].	+	2CMZ is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMZ OCA].

	==Reference==		==Reference==
-	~~Crystal structure of the low-pH form of the vesicular stomatitis virus glycoprotein G., Roche S, Bressanelli S, Rey FA, Gaudin Y, Science. 2006 Jul 14;313(5784):187-91.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/16840692 16840692]~~	+	<ref group="xtra">PMID:16840692</ref><references group="xtra"/>
-	~~[[Category: Single protein]]~~	+
	[[Category: Vesicular stomatitis indiana virus]]		[[Category: Vesicular stomatitis indiana virus]]
	[[Category: Bressanelli, S.]]		[[Category: Bressanelli, S.]]
Line 35:		Line 34:
	[[Category: Transmembrane]]		[[Category: Transmembrane]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 29 07~~:50:~~24 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:27:38 2009''

OCA at 04:50, 29 July 2008

OCA — Tue, 29 Jul 2008 04:50:26 GMT

←Older revision		Revision as of 04:50, 29 July 2008
Line 1:		Line 1:
-	[[Image:2cmz.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2cmz.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}		{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}

-	~~'''~~CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION~~'''~~	+	===CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION===


-	~~==Overview==~~	+	<!--
-	~~The vesicular stomatitis virus has an atypical membrane fusion glycoprotein (G) exhibiting a pH~~-~~dependent equilibrium between two forms at the virus surface. Membrane fusion is triggered during the transition from the high~~- ~~to low-pH form.~~ The ~~structure of G in its low-pH form shows the classic hairpin conformation observed in all other fusion proteins in their postfusion conformation~~, ~~in spite of a novel fold combining features of fusion proteins from classes I and II. The structure provides a framework for understanding~~ the ~~reversibility of~~ the ~~G conformational change~~. ~~Unexpectedly~~, G is ~~homologous to gB of herpesviruses, which raises important questions on viral evolution~~.	+	The line below this paragraph, {{ABSTRACT_PUBMED_16840692}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 16840692 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_16840692}}

	==About this Structure==		==About this Structure==
Line 30:		Line 34:
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
	[[Category: Transmembrane]]		[[Category: Transmembrane]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sat May 3 22~~:32:51 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 07:50:24 2008''

OCA at 19:32, 3 May 2008

OCA — Sat, 03 May 2008 19:32:52 GMT

←Older revision		Revision as of 19:32, 3 May 2008
Line 1:		Line 1:
	[[Image:2cmz.gif\|left\|200px]]		[[Image:2cmz.gif\|left\|200px]]

-	{{Structure	+	<!--
-	\|PDB~~= 2cmz \|SIZE=350\|CAPTION= <~~scene ~~name='initialview01'>2cmz</scene>~~, ~~resolution 2~~.~~40Å~~	+	The line below this paragraph, containing "STRUCTURE_2cmz", creates the "Structure Box" on the page.
-	~~\|SITE= <scene name='pdbsite=AC1:Ca+Binding+Site+For+Chain+C'>AC1</scene~~>	+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	~~\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PE4:2-~~{~~2-[2-(2-~~{~~2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene>~~	+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	\|~~ACTIVITY~~=	+	or leave the SCENE parameter empty for the default display.
-	\|~~GENE~~=	+	-->
-	~~\|DOMAIN=~~	+	{{STRUCTURE_2cmz\| PDB=2cmz \| SCENE= }}
-	~~\|RELATEDENTRY=~~	+
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmz OCA], [http://www.ebi.ac.uk/pdbsum/2cmz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cmz RCSB]</span>	+
-	}}	+

	'''CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION'''		'''CRYSTAL STRUCTURE OF VSV-INDIANA (MUDD-SUMMERS STRAIN) GLYCOPROTEIN UNDER ITS ACIDIC CONFORMATION'''
Line 27:		Line 24:
	[[Category: Bressanelli, S.]]		[[Category: Bressanelli, S.]]
	[[Category: Roche, S.]]		[[Category: Roche, S.]]
-	[[Category: ~~envelope~~ protein]]	+	[[Category: Envelope protein]]
-	[[Category: ~~glycoprotein~~]]	+	[[Category: Glycoprotein]]
-	[[Category: ~~lipoprotein~~]]	+	[[Category: Lipoprotein]]
-	[[Category: ~~membrane~~]]	+	[[Category: Membrane]]
-	[[Category: ~~membrane~~ protein]]	+	[[Category: Membrane protein]]
-	[[Category: ~~transmembrane~~]]	+	[[Category: Transmembrane]]
-		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 22:32:51 2008''
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Mar 31 02~~:23:47 2008''	+