2d16 - Revision history

OCA at 08:22, 25 October 2023

OCA — Wed, 25 Oct 2023 08:22:03 GMT

←Older revision		Revision as of 08:22, 25 October 2023
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	<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pyrococcus_horikoshii~~ Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.65Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [https://pdbe.org/2d16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [https://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [https://pdbe.org/2d16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [https://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/O59581_PYRHO O59581_PYRHO]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Pyrococcus horikoshii]]	+	[[Category: Pyrococcus horikoshii OT3]]
-	[[Category: Kunishima, N]]	+	[[Category: Kunishima N]]
-	[[Category: Lokanath~~, N K]]~~	+	[[Category: Lokanath NK]]
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Hypothetical]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 07:32, 2 February 2022

OCA — Wed, 02 Feb 2022 07:32:13 GMT

←Older revision		Revision as of 07:32, 2 February 2022
Line 3:		Line 3:
	<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [~~http~~://pdbe.org/2d16 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [https://pdbe.org/2d16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [https://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:29, 29 April 2020

OCA — Wed, 29 Apr 2020 07:29:54 GMT

←Older revision		Revision as of 07:29, 29 April 2020
Line 1:		Line 1:

	==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==		==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==
-	<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>	+	<StructureSection load='2d16' size='340' side='right'caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2D16 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://pdbe.org/2d16 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://pdbe.org/2d16 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pyrococcus horikoshii]]		[[Category: Pyrococcus horikoshii]]
	[[Category: Kunishima, N]]		[[Category: Kunishima, N]]

OCA at 08:13, 25 July 2018

OCA — Wed, 25 Jul 2018 08:13:19 GMT

←Older revision		Revision as of 08:13, 25 July 2018
Line 11:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d16_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d16_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 06:57, 18 October 2016

OCA — Tue, 18 Oct 2016 06:57:57 GMT

←Older revision		Revision as of 06:57, 18 October 2016
Line 1:		Line 1:
		+
	==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==		==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==
	<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pyrho Pyrho~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://pdbe.org/2d16 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://pdbe.org/2d16 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2d16 ProSAT], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pyrho~~]]	+	[[Category: Pyrococcus horikoshii]]
	[[Category: Kunishima, N]]		[[Category: Kunishima, N]]
	[[Category: Lokanath, N K]]		[[Category: Lokanath, N K]]

OCA at 18:34, 8 February 2016

OCA — Mon, 08 Feb 2016 18:34:59 GMT

←Older revision		Revision as of 18:34, 8 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d16 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 14:17, 10 September 2015

OCA — Thu, 10 Sep 2015 14:17:39 GMT

←Older revision		Revision as of 14:17, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>		<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pyrococcus_horikoshii Pyrococcus horikoshii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrho Pyrho]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://pdbe.org/2d16 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pyrococcus horikoshii~~]]	+	[[Category: Pyrho]]
	[[Category: Kunishima, N]]		[[Category: Kunishima, N]]
	[[Category: Lokanath, N K]]		[[Category: Lokanath, N K]]

OCA at 01:20, 25 December 2014

OCA — Thu, 25 Dec 2014 01:20:46 GMT

←Older revision		Revision as of 01:20, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Pyrococcus horikoshii]]		[[Category: Pyrococcus horikoshii]]
-	[[Category: Kunishima, N.]]	+	[[Category: Kunishima, N]]
-	[[Category: Lokanath, N K.]]	+	[[Category: Lokanath, N K]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
	[[Category: Hypothetical]]		[[Category: Hypothetical]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 01:06, 30 September 2014

OCA — Tue, 30 Sep 2014 01:06:03 GMT

←Older revision		Revision as of 01:06, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2d16.png\|left\|200px]]~~	+	==Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3==
-		+	<StructureSection load='2d16' size='340' side='right' caption='[[2d16]], [[Resolution\|resolution]] 1.65Å' scene=''>
-	~~{{STRUCTURE_2d16\| PDB=2d16 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2D16 FirstGlance]. <br>
-	===Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d16 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d16 RCSB], [http://www.ebi.ac.uk/pdbsum/2d16 PDBsum], [http://www.topsan.org/Proteins/RSGI/2d16 TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2d16]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D16 OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/2d16_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Pyrococcus horikoshii]]		[[Category: Pyrococcus horikoshii]]
	[[Category: Kunishima, N.]]		[[Category: Kunishima, N.]]

OCA: Protected "2d16" [edit=sysop:move=sysop]

OCA — Sun, 06 Jan 2013 10:22:34 GMT

Protected "2d16" [edit=sysop:move=sysop]

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Revision as of 10:22, 6 January 2013