2e0c - Revision history

OCA at 08:32, 25 October 2023

OCA — Wed, 25 Oct 2023 08:32:54 GMT

←Older revision		Revision as of 08:32, 25 October 2023
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	<StructureSection load='2e0c' size='340' side='right'caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2e0c' size='340' side='right'caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Sulto Sulto~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E0C FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[2dht\|2dht]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	~~<tr~~ id~~='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))]~~, ~~with EC number~~ [~~https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42~~] ~~</span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [https://pdbe.org/2e0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [https://www.ebi.ac.uk/pdbsum/2e0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e0c ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [https://pdbe.org/2e0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [https://www.ebi.ac.uk/pdbsum/2e0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e0c ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q96YK6_SULTO Q96YK6_SULTO]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Sulto~~]]	+	[[Category: Sulfurisphaera tokodaii str. 7]]
-	[[Category: Kouyama, T]]	+	[[Category: Kouyama T]]
-	~~[[Category: Homedimer]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 20:38, 20 October 2021

OCA — Wed, 20 Oct 2021 20:38:27 GMT

←Older revision		Revision as of 20:38, 20 October 2021
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	<StructureSection load='2e0c' size='340' side='right'caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2e0c' size='340' side='right'caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2E0C FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2dht\|2dht]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [~~http~~://pdbe.org/2e0c PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2e0c PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2e0c ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [https://pdbe.org/2e0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [https://www.ebi.ac.uk/pdbsum/2e0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e0c ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 08:32, 1 January 2020

OCA — Wed, 01 Jan 2020 08:32:44 GMT

←Older revision		Revision as of 08:32, 1 January 2020
Line 1:		Line 1:

	==crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution==		==crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution==
-	<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='2e0c' size='340' side='right'caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>		<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
Line 18:		Line 18:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e0c ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e0c ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Isocitrate dehydrogenase is a catabolic enzyme that acts during the third step of the tricarboxylic acid cycle. The hypothetical protein ST2166 from the archaeon Sulfolobus tokodaii was isolated and crystallized. It shares high primary structure homology with prokaryotic NADP(+)-dependent IDHs, suggesting that these enzymes share a common enzymatic mechanism. The crystal structure of ST2166 was determined at 2.0 A resolution in the apo form, and then the structure of the crystal soaked with NADP(+) was also determined at 2.4 A resolution, which contained NADP(+) bound at the putative active site. Comparisons between the structures of apo and NADP(+)-bound forms and NADP-IDHs from other prokaryotes suggest that prokaryotic NADP-IDHs recognize their cofactors using conserved Lys335, Tyr336, and Arg386 in ST2166 at the opening cleft before the domain closure.
		+
		+	Crystal Structures of the Putative Isocitrate Dehydrogenase from Sulfolobus tokodaii Strain 7 in the Apo and NADP(+)-Bound Forms.,Kondo H, Murakami M Archaea. 2018 Dec 19;2018:7571984. doi: 10.1155/2018/7571984. eCollection 2018. PMID:30662370<ref>PMID:30662370</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 2e0c" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
-	*[[Isocitrate dehydrogenase\|Isocitrate dehydrogenase]]	+	*[[Isocitrate dehydrogenase 3D structures\|Isocitrate dehydrogenase 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Sulto]]		[[Category: Sulto]]
	[[Category: Kouyama, T]]		[[Category: Kouyama, T]]
	[[Category: Homedimer]]		[[Category: Homedimer]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 06:41, 6 June 2018

OCA — Wed, 06 Jun 2018 06:41:08 GMT

←Older revision		Revision as of 06:41, 6 June 2018
Line 1:		Line 1:
		+
	==crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution==		==crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution==
	<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
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	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://pdbe.org/2e0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://pdbe.org/2e0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2e0c ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/2e0c_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/2e0c_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e0c ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 01:24, 12 September 2015

OCA — Sat, 12 Sep 2015 01:24:38 GMT

←Older revision		Revision as of 01:24, 12 September 2015
Line 2:		Line 2:
	<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulto Sulto]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://pdbe.org/2e0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Sulfolobus tokodaii str. 7~~]]	+	[[Category: Sulto]]
	[[Category: Kouyama, T]]		[[Category: Kouyama, T]]
	[[Category: Homedimer]]		[[Category: Homedimer]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 16:20, 15 January 2015

OCA — Thu, 15 Jan 2015 16:20:22 GMT

←Older revision		Revision as of 16:20, 15 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>		<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Sulfolobus tokodaii str. 7]]		[[Category: Sulfolobus tokodaii str. 7]]
-	[[Category: Kouyama, T.]]	+	[[Category: Kouyama, T]]
	[[Category: Homedimer]]		[[Category: Homedimer]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 05:19, 3 October 2014

OCA — Fri, 03 Oct 2014 05:19:32 GMT

←Older revision		Revision as of 05:19, 3 October 2014
Line 1:		Line 1:
-	~~[[Image:2e0c.png\|left\|200px]]~~	+	==crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution==
-		+	<StructureSection load='2e0c' size='340' side='right' caption='[[2e0c]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~{{STRUCTURE_2e0c\| PDB=2e0c \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E0C FirstGlance]. <br>
-	===crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution===	+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2dht\|2dht]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e0c OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2e0c RCSB], [http://www.ebi.ac.uk/pdbsum/2e0c PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/2e0c_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
-	*[[Ferguson sandbox 1\|Ferguson sandbox 1]]
	*[[Isocitrate dehydrogenase\|Isocitrate dehydrogenase]]		*[[Isocitrate dehydrogenase\|Isocitrate dehydrogenase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Sulfolobus tokodaii str. 7]]		[[Category: Sulfolobus tokodaii str. 7]]
	[[Category: Kouyama, T.]]		[[Category: Kouyama, T.]]
	[[Category: Homedimer]]		[[Category: Homedimer]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 22:08, 20 October 2012

OCA — Sat, 20 Oct 2012 22:08:20 GMT

←Older revision		Revision as of 22:08, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[2e0c]] is a 2 chain structure ~~of [[Ferguson sandbox 1]] and [[Isocitrate dehydrogenase]]~~ with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA].	+	[[2e0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA].

	==See Also==		==See Also==

OCA at 15:21, 27 July 2012

OCA — Fri, 27 Jul 2012 15:21:36 GMT

←Older revision		Revision as of 15:21, 27 July 2012
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	[[Image:2e0c.png\|left\|200px]]		[[Image:2e0c.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2e0c", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2e0c\| PDB=2e0c \| SCENE= }}		{{STRUCTURE_2e0c\| PDB=2e0c \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	[[2e0c]] is a 2 chain structure of [[Isocitrate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA].	+	[[2e0c]] is a 2 chain structure of [[Ferguson sandbox 1]] and [[Isocitrate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E0C OCA].

	==See Also==		==See Also==
-	*[[Isocitrate dehydrogenase]]	+	*[[Ferguson sandbox 1\|Ferguson sandbox 1]]
		+	*[[Isocitrate dehydrogenase\|Isocitrate dehydrogenase]]
	[[Category: Sulfolobus tokodaii str. 7]]		[[Category: Sulfolobus tokodaii str. 7]]
	[[Category: Kouyama, T.]]		[[Category: Kouyama, T.]]
	[[Category: Homedimer]]		[[Category: Homedimer]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA: Protected "2e0c" [edit=sysop:move=sysop]

OCA — Mon, 27 Dec 2010 02:27:27 GMT

Protected "2e0c" [edit=sysop:move=sysop]

←Older revision

Revision as of 02:27, 27 December 2010