2ebq - Revision history

OCA at 18:48, 29 May 2024

OCA — Wed, 29 May 2024 18:48:55 GMT

←Older revision		Revision as of 18:48, 29 May 2024
Line 1:		Line 1:

	==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==		==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==
-	<StructureSection load='2ebq' size='340' side='right'caption='[[2ebq~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2ebq' size='340' side='right'caption='[[2ebq]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'~~>~~[[2ebr\|2ebr]]~~<~~/div></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">NUP153 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [https://pdbe.org/2ebq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [https://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebq ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [https://pdbe.org/2ebq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [https://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebq ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN]] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.	+	[https://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 26:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hayashi, F]]	+	[[Category: Hayashi F]]
-	[[Category: Kurosaki, C]]	+	[[Category: Kurosaki C]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+	[[Category: Yoshida M]]
-	[[Category: Yoshida, M]]	+	[[Category: Zhang HP]]
-	[[Category: Zhang~~, H P]]~~	+
-	~~[[Category: 153 kda nucleoporin]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Nuclear pore complex protein]]~~	+
-	~~[[Category: Nucleoporin nup153]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Transport protein]]~~	+
-	~~[[Category: Zf-ranbp domain~~]]	+

OCA at 11:57, 10 February 2021

OCA — Wed, 10 Feb 2021 11:57:09 GMT

←Older revision		Revision as of 11:57, 10 February 2021
Line 1:		Line 1:

	==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==		==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==
-	<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2ebq' size='340' side='right'caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2ebr\|2ebr]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [~~http~~://pdbe.org/2ebq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebq ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [https://pdbe.org/2ebq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [https://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebq ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN]] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.	+	[[https://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN]] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:

	==See Also==		==See Also==
-	*[[Nucleoporin\|Nucleoporin]]	+	*[[Nucleoporin 3D structures\|Nucleoporin 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]
	[[Category: Kurosaki, C]]		[[Category: Kurosaki, C]]

OCA at 06:28, 6 June 2018

OCA — Wed, 06 Jun 2018 06:28:22 GMT

←Older revision		Revision as of 06:28, 6 June 2018
Line 1:		Line 1:
		+
	==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==		==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==
	<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://pdbe.org/2ebq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://pdbe.org/2ebq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebq ProSAT], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebq_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebq_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 17:47, 8 February 2016

OCA — Mon, 08 Feb 2016 17:47:06 GMT

←Older revision		Revision as of 17:47, 8 February 2016
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ebq ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 13:57, 10 September 2015

OCA — Thu, 10 Sep 2015 13:57:28 GMT

←Older revision		Revision as of 13:57, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://pdbe.org/2ebq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 25:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Homo sapiens~~]]	+	[[Category: Human]]
	[[Category: Hayashi, F]]		[[Category: Hayashi, F]]
	[[Category: Kurosaki, C]]		[[Category: Kurosaki, C]]

OCA at 01:04, 25 December 2014

OCA — Thu, 25 Dec 2014 01:04:57 GMT

←Older revision		Revision as of 01:04, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NU153_HUMAN NU153_HUMAN]] Possible DNA-binding subunit of the nuclear pore complex (NPC). The repeat-containing domain may be involved in anchoring components of the pore complex to the pore membrane.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Hayashi, F.]]	+	[[Category: Hayashi, F]]
-	[[Category: Kurosaki, C.]]	+	[[Category: Kurosaki, C]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
-	[[Category: Yoshida, M.]]	+	[[Category: Yoshida, M]]
-	[[Category: Zhang, H P.]]	+	[[Category: Zhang, H P]]
	[[Category: 153 kda nucleoporin]]		[[Category: 153 kda nucleoporin]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
Line 35:		Line 37:
	[[Category: Nuclear pore complex protein]]		[[Category: Nuclear pore complex protein]]
	[[Category: Nucleoporin nup153]]		[[Category: Nucleoporin nup153]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Transport protein]]		[[Category: Transport protein]]
	[[Category: Zf-ranbp domain]]		[[Category: Zf-ranbp domain]]

OCA at 04:57, 29 September 2014

OCA — Mon, 29 Sep 2014 04:57:00 GMT

←Older revision		Revision as of 04:57, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:2ebq.png\|left\|200px]]~~	+	==Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153==
-		+	<StructureSection load='2ebq' size='340' side='right' caption='[[2ebq]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2ebq\| PDB=2ebq \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EBQ FirstGlance]. <br>
-	===Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ebr\|2ebr]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NUP153 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ebq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ebq RCSB], [http://www.ebi.ac.uk/pdbsum/2ebq PDBsum], [http://www.topsan.org/Proteins/RSGI/2ebq TOPSAN]</span></td></tr>
-	[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebq_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Nucleoporin\|Nucleoporin]]		*[[Nucleoporin\|Nucleoporin]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]

OCA at 10:56, 20 October 2012

OCA — Sat, 20 Oct 2012 10:56:54 GMT

←Older revision		Revision as of 10:56, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[2ebq]] is a 1 chain structure ~~of [[Nucleoporin]]~~ with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA].	+	[[2ebq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBQ OCA].

	==See Also==		==See Also==

OCA at 03:46, 26 July 2012

OCA — Thu, 26 Jul 2012 03:46:49 GMT

←Older revision		Revision as of 03:46, 26 July 2012
Line 1:		Line 1:
	[[Image:2ebq.png\|left\|200px]]		[[Image:2ebq.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2ebq", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2ebq\| PDB=2ebq \| SCENE= }}		{{STRUCTURE_2ebq\| PDB=2ebq \| SCENE= }}

Line 16:		Line 10:

	==See Also==		==See Also==
-	*[[Nucleoporin]]	+	*[[Nucleoporin\|Nucleoporin]]
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Hayashi, F.]]		[[Category: Hayashi, F.]]

OCA: Protected "2ebq" [edit=sysop:move=sysop]

OCA — Mon, 27 Dec 2010 00:52:35 GMT

Protected "2ebq" [edit=sysop:move=sysop]

←Older revision

Revision as of 00:52, 27 December 2010