2fgo - Revision history

OCA at 09:26, 30 August 2023

OCA — Wed, 30 Aug 2023 09:26:47 GMT

←Older revision		Revision as of 09:26, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2fgo' size='340' side='right'caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>		<StructureSection load='2fgo' size='340' side='right'caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.32Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [https://pdbe.org/2fgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [https://www.ebi.ac.uk/pdbsum/2fgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgo ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [https://pdbe.org/2fgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [https://www.ebi.ac.uk/pdbsum/2fgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgo ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9I6D2_PSEAE Q9I6D2_PSEAE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 37:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Giastas, P]]
-	[[Category: Mavridis, I M]]
-	[[Category: Pinotsis, N]]
-	[[Category: Allochromatium vinosum]]
-	[[Category: Electron transport]]
-	[[Category: Ferredoxin]]
-	[[Category: Iron binding protein]]
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: ~~Reduction potential~~]]	+	[[Category: Giastas P]]
		+	[[Category: Mavridis IM]]
		+	[[Category: Pinotsis N]]

OCA at 16:04, 22 December 2021

OCA — Wed, 22 Dec 2021 16:04:45 GMT

←Older revision		Revision as of 16:04, 22 December 2021
Line 3:		Line 3:
	<StructureSection load='2fgo' size='340' side='right'caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>		<StructureSection load='2fgo' size='340' side='right'caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2FGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [~~http~~://pdbe.org/2fgo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2fgo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [https://pdbe.org/2fgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [https://www.ebi.ac.uk/pdbsum/2fgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgo ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 10:49, 18 March 2020

OCA — Wed, 18 Mar 2020 10:49:54 GMT

←Older revision		Revision as of 10:49, 18 March 2020
Line 1:		Line 1:

	==Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa==		==Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa==
-	<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>	+	<StructureSection load='2fgo' size='340' side='right'caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
Line 28:		Line 28:

	==See Also==		==See Also==
-	*[[Ferredoxin\|Ferredoxin]]	+	*[[Ferredoxin 3D structures\|Ferredoxin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Giastas, P]]		[[Category: Giastas, P]]
	[[Category: Mavridis, I M]]		[[Category: Mavridis, I M]]

OCA at 09:27, 14 June 2018

OCA — Thu, 14 Jun 2018 09:27:15 GMT

←Older revision		Revision as of 09:27, 14 June 2018
Line 1:		Line 1:
		+
	==Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa==		==Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa==
	<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>		<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://pdbe.org/2fgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://pdbe.org/2fgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgo ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/2fgo_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/2fgo_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fgo ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 14:13, 11 September 2015

OCA — Fri, 11 Sep 2015 14:13:58 GMT

←Older revision		Revision as of 14:13, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>		<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_aeruginosa Pseudomonas aeruginosa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://pdbe.org/2fgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2fgo" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 31:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Pseudomonas aeruginosa]]
	[[Category: Giastas, P]]		[[Category: Giastas, P]]
	[[Category: Mavridis, I M]]		[[Category: Mavridis, I M]]
Line 39:		Line 39:
	[[Category: Ferredoxin]]		[[Category: Ferredoxin]]
	[[Category: Iron binding protein]]		[[Category: Iron binding protein]]
		+	[[Category: Pseudomonas aeruginosa]]
	[[Category: Reduction potential]]		[[Category: Reduction potential]]

OCA at 08:46, 16 January 2015

OCA — Fri, 16 Jan 2015 08:46:33 GMT

←Older revision		Revision as of 08:46, 16 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
-	[[Category: Giastas, P.]]	+	[[Category: Giastas, P]]
-	[[Category: Mavridis, I M.]]	+	[[Category: Mavridis, I M]]
-	[[Category: Pinotsis, N.]]	+	[[Category: Pinotsis, N]]
	[[Category: Allochromatium vinosum]]		[[Category: Allochromatium vinosum]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Ferredoxin]]		[[Category: Ferredoxin]]
	[[Category: Iron binding protein]]		[[Category: Iron binding protein]]
-	[[Category: Pseudomonas aeruginosa]]
	[[Category: Reduction potential]]		[[Category: Reduction potential]]

OCA at 04:56, 29 September 2014

OCA — Mon, 29 Sep 2014 04:56:06 GMT

←Older revision		Revision as of 04:56, 29 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2fgo.~~png\|left~~\|200px]]	+	==Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa==
		+	<StructureSection load='2fgo' size='340' side='right' caption='[[2fgo]], [[Resolution\|resolution]] 1.32Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FGO FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fgo RCSB], [http://www.ebi.ac.uk/pdbsum/2fgo PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/2fgo_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The structure of the 2[4Fe-4S] ferredoxin (PaFd) from Pseudomonas aeruginosa, which belongs to the Allochromatium vinosum (Alvin) subfamily, has been determined by X-ray crystallography at 1.32-A resolution, which is the highest up to now for a member of this subfamily of Fds. The main structural features of PaFd are similar to those of AlvinFd. However, the significantly higher resolution of the PaFd structure makes possible a reliable comparison with available high-resolution structures of [4Fe-4S]-containing Fds, in an effort to rationalize the unusual electrochemical properties of Alvin-like Fds. Three major factors contributing to the reduction potential values of [4Fe-4S]2+/+ clusters of Fds, namely, the surface accessibility of the clusters, the N-H...S hydrogen-bonding network, and the volume of the cavities hosting the clusters, are extensively discussed. The volume of the cavities is introduced in the present work for the first time, and can in part explain the very negative potential of cluster I of Alvin-like Fds.

-	~~{{STRUCTURE_2fgo\| PDB=2fgo \| SCENE= }}~~	+	The structure of the 2[4Fe-4S] ferredoxin from Pseudomonas aeruginosa at 1.32-A resolution: comparison with other high-resolution structures of ferredoxins and contributing structural features to reduction potential values.,Giastas P, Pinotsis N, Efthymiou G, Wilmanns M, Kyritsis P, Moulis JM, Mavridis IM J Biol Inorg Chem. 2006 Jun;11(4):445-58. Epub 2006 Apr 5. PMID:16596388<ref>PMID:16596388</ref>

-	~~===Structure~~ of the ~~2[4FE-4S] ferredoxin from Pseudomonas aeruginosa===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_16596388}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2fgo]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA].~~	+

	==See Also==		==See Also==
	*[[Ferredoxin\|Ferredoxin]]		*[[Ferredoxin\|Ferredoxin]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:016596388<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Giastas, P.]]		[[Category: Giastas, P.]]

OCA at 19:30, 20 October 2012

OCA — Sat, 20 Oct 2012 19:30:27 GMT

←Older revision		Revision as of 19:30, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2fgo]] is a 1 chain structure ~~of [[Ferredoxin]]~~ with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA].	+	[[2fgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGO OCA].

	==See Also==		==See Also==

OCA at 07:34, 27 July 2012

OCA — Fri, 27 Jul 2012 07:34:54 GMT

←Older revision		Revision as of 07:34, 27 July 2012
Line 1:		Line 1:
	[[Image:2fgo.png\|left\|200px]]		[[Image:2fgo.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2fgo", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2fgo\| PDB=2fgo \| SCENE= }}		{{STRUCTURE_2fgo\| PDB=2fgo \| SCENE= }}

	===Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa===		===Structure of the 2[4FE-4S] ferredoxin from Pseudomonas aeruginosa===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_16596388}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 16596388 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_16596388}}		{{ABSTRACT_PUBMED_16596388}}

Line 22:		Line 11:

	==See Also==		==See Also==
-	*[[Ferredoxin]]	+	*[[Ferredoxin\|Ferredoxin]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16596388~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016596388</ref><references group="xtra"/>
	[[Category: Pseudomonas aeruginosa]]		[[Category: Pseudomonas aeruginosa]]
	[[Category: Giastas, P.]]		[[Category: Giastas, P.]]

OCA: Protected "2fgo" [edit=sysop:move=sysop]

OCA — Mon, 27 Dec 2010 00:49:40 GMT

Protected "2fgo" [edit=sysop:move=sysop]

←Older revision

Revision as of 00:49, 27 December 2010