2fz6 - Revision history

OCA at 09:33, 30 August 2023

OCA — Wed, 30 Aug 2023 09:33:47 GMT

←Older revision		Revision as of 09:33, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2fz6' size='340' side='right'caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2fz6' size='340' side='right'caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_13631 Atcc 13631~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.1Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [https://pdbe.org/2fz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [https://www.ebi.ac.uk/pdbsum/2fz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [https://pdbe.org/2fz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [https://www.ebi.ac.uk/pdbsum/2fz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HYP1_HYPJE HYP1_HYPJE]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.	+	[https://www.uniprot.org/uniprot/HYP1_HYPJE HYP1_HYPJE] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 13631]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Hakanpaa, J M~~]]	+	[[Category: Trichoderma reesei]]
-	[[Category: ~~Rouvinen, J~~]]	+	[[Category: Hakanpaa JM]]
-	[[Category: ~~Amphiphile]]~~	+	[[Category: Rouvinen J]]
-	~~[[Category: Beta barrel]]~~	+
-	~~[[Category: Hydrophobin]]~~	+
-	~~[[Category: Pseudo-merohedral twinning]]~~	+
-	~~[[Category: Surface active protein~~]]	+

OCA at 09:56, 5 May 2021

OCA — Wed, 05 May 2021 09:56:51 GMT

←Older revision		Revision as of 09:56, 5 May 2021
Line 3:		Line 3:
	<StructureSection load='2fz6' size='340' side='right'caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2fz6' size='340' side='right'caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [~~http~~://pdbe.org/2fz6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2fz6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [https://pdbe.org/2fz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [https://www.ebi.ac.uk/pdbsum/2fz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HYP1_HYPJE HYP1_HYPJE]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.	+	[[https://www.uniprot.org/uniprot/HYP1_HYPJE HYP1_HYPJE]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:33, 24 July 2019

OCA — Wed, 24 Jul 2019 09:33:58 GMT

←Older revision		Revision as of 09:33, 24 July 2019
Line 1:		Line 1:

	==Crystal structure of hydrophobin HFBI==		==Crystal structure of hydrophobin HFBI==
-	<StructureSection load='2fz6' size='340' side='right' caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>	+	<StructureSection load='2fz6' size='340' side='right'caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fz6_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fz6_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 34:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 13631]]		[[Category: Atcc 13631]]
		+	[[Category: Large Structures]]
	[[Category: Hakanpaa, J M]]		[[Category: Hakanpaa, J M]]
	[[Category: Rouvinen, J]]		[[Category: Rouvinen, J]]

OCA at 07:46, 18 October 2017

OCA — Wed, 18 Oct 2017 07:46:03 GMT

←Older revision		Revision as of 07:46, 18 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of hydrophobin HFBI==		==Crystal structure of hydrophobin HFBI==
	<StructureSection load='2fz6' size='340' side='right' caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>		<StructureSection load='2fz6' size='340' side='right' caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Trichoderma_reesei Trichoderma reesei~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_13631 Atcc 13631]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://pdbe.org/2fz6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://pdbe.org/2fz6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fz6 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Trichoderma reesei~~]]	+	[[Category: Atcc 13631]]
	[[Category: Hakanpaa, J M]]		[[Category: Hakanpaa, J M]]
	[[Category: Rouvinen, J]]		[[Category: Rouvinen, J]]

OCA at 01:52, 12 September 2015

OCA — Sat, 12 Sep 2015 01:52:50 GMT

←Older revision		Revision as of 01:52, 12 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://pdbe.org/2fz6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~HYP1_TRIRE HYP1_TRIRE~~]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.	+	[[http://www.uniprot.org/uniprot/HYP1_HYPJE HYP1_HYPJE]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2fz6" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 22:17, 25 December 2014

OCA — Thu, 25 Dec 2014 22:17:21 GMT

←Older revision		Revision as of 22:17, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/HYP1_TRIRE HYP1_TRIRE]] Contributes to surface hydrophobicity, which is important for processes such as association of hyphae in reproductive structures, dispersal of aerial spores and adhesion of pathogens to host structures.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Trichoderma reesei]]		[[Category: Trichoderma reesei]]
-	[[Category: Hakanpaa, J M.]]	+	[[Category: Hakanpaa, J M]]
-	[[Category: Rouvinen, J.]]	+	[[Category: Rouvinen, J]]
	[[Category: Amphiphile]]		[[Category: Amphiphile]]
	[[Category: Beta barrel]]		[[Category: Beta barrel]]

OCA at 10:13, 30 September 2014

OCA — Tue, 30 Sep 2014 10:13:07 GMT

←Older revision		Revision as of 10:13, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2fz6.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of hydrophobin HFBI==
		+	<StructureSection load='2fz6' size='340' side='right' caption='[[2fz6]], [[Resolution\|resolution]] 2.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FZ6 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1r2m\|1r2m]], [[2b97\|2b97]], [[2fz7\|2fz7]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fz6 RCSB], [http://www.ebi.ac.uk/pdbsum/2fz6 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fz6_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Hydrophobins are small fungal proteins that are highly surface active and possess a unique ability to form amphiphilic membranes through spontaneous self-assembly. The first crystal structure of a hydrophobin, Trichoderma reesei HFBII, revealed the structural basis for the function of this amphiphilic protein--a patch consisting of hydrophobic side chains on the protein surface. Here, the crystal structures of a native and a variant T. reesei hydrophobin HFBI are presented, revealing the same overall structure and functional hydrophobic patch as in the HFBII structure. However, some structural flexibility was found in the native HFBI structure: The asymmetric unit contained four molecules, and, in two of these, an area of seven residues was displaced as compared to the two other HFBI molecules and the previously determined HFBII structure. This structural change is most probably induced by multimer formation. Both the native and the N-Cys-variant of HFBI were crystallized in the presence of detergents, but an association between the protein and a detergent was only detected in the variant structure. There, the molecules were arranged into an extraordinary detergent-associated octamer and the solvent content of the crystals was 75%. This study highlights the conservation of the fold of class II hydrophobins in spite of the low sequence identity and supports our previous suggestion that concealment of the hydrophobic surface areas of the protein is the driving force in the formation of multimers and monolayers in the self-assembly process.

-	~~{{STRUCTURE_2fz6\| PDB=2fz6 \| SCENE= }}~~	+	Two crystal structures of Trichoderma reesei hydrophobin HFBI--the structure of a protein amphiphile with and without detergent interaction.,Hakanpaa J, Szilvay GR, Kaljunen H, Maksimainen M, Linder M, Rouvinen J Protein Sci. 2006 Sep;15(9):2129-40. Epub 2006 Aug 1. PMID:16882996<ref>PMID:16882996</ref>

-	~~===Crystal structure~~ of ~~hydrophobin HFBI===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_16882996}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2fz6]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Trichoderma_reesei Trichoderma reesei]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:016882996<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Trichoderma reesei]]		[[Category: Trichoderma reesei]]
	[[Category: Hakanpaa, J M.]]		[[Category: Hakanpaa, J M.]]

OCA: Protected "2fz6" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 14:41:16 GMT

Protected "2fz6" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:41, 7 January 2013

OCA at 14:41, 7 January 2013

OCA — Mon, 07 Jan 2013 14:41:13 GMT

←Older revision		Revision as of 14:41, 7 January 2013
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-	{{Seed}}
	[[Image:2fz6.png\|left\|200px]]		[[Image:2fz6.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2fz6", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2fz6\| PDB=2fz6 \| SCENE= }}		{{STRUCTURE_2fz6\| PDB=2fz6 \| SCENE= }}

	===Crystal structure of hydrophobin HFBI===		===Crystal structure of hydrophobin HFBI===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_16882996}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 16882996 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_16882996}}		{{ABSTRACT_PUBMED_16882996}}

	==About this Structure==		==About this Structure==
-	~~2FZ6~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Hypocrea_jecorina Hypocrea jecorina~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA].	+	[[2fz6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichoderma_reesei Trichoderma reesei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16882996~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016882996</ref><references group="xtra"/>
-	[[Category: ~~Hypocrea jecorina~~]]	+	[[Category: Trichoderma reesei]]
	[[Category: Hakanpaa, J M.]]		[[Category: Hakanpaa, J M.]]
	[[Category: Rouvinen, J.]]		[[Category: Rouvinen, J.]]
Line 31:		Line 19:
	[[Category: Hydrophobin]]		[[Category: Hydrophobin]]
	[[Category: Pseudo-merohedral twinning]]		[[Category: Pseudo-merohedral twinning]]
-		+	[[Category: Surface active protein]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Wed Feb 18 09:32:40 2009''~~	+

OCA at 07:32, 18 February 2009

OCA — Wed, 18 Feb 2009 07:32:41 GMT

←Older revision		Revision as of 07:32, 18 February 2009
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	==About this Structure==		==About this Structure==
-	2FZ6 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Hypocrea_jecorina Hypocrea jecorina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA].	+	2FZ6 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Hypocrea_jecorina Hypocrea jecorina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ6 OCA].

	==Reference==		==Reference==
-	Two crystal structures of Trichoderma reesei hydrophobin HFBI--the structure of a protein amphiphile with and without detergent interaction., Hakanpaa J, Szilvay GR, Kaljunen H, Maksimainen M, Linder M, Rouvinen J, Protein Sci. 2006 Sep;15(9):2129-40. Epub 2006 Aug 1. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/16882996 16882996]~~	+	<ref group="xtra">PMID:16882996</ref><references group="xtra"/>
	[[Category: Hypocrea jecorina]]		[[Category: Hypocrea jecorina]]
-	[[Category: Single protein]]
	[[Category: Hakanpaa, J M.]]		[[Category: Hakanpaa, J M.]]
	[[Category: Rouvinen, J.]]		[[Category: Rouvinen, J.]]
Line 33:		Line 32:
	[[Category: Pseudo-merohedral twinning]]		[[Category: Pseudo-merohedral twinning]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 29 15~~:49:~~05 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:32:40 2009''