2g64 - Revision history

OCA at 09:36, 30 August 2023

OCA — Wed, 30 Aug 2023 09:36:02 GMT

←Older revision		Revision as of 09:36, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2g64' size='340' side='right'caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2g64' size='340' side='right'caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Caeel Caeel~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G64 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~, ~~<scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~B0041.6 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=6239 CAEEL])</td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [https://pdbe.org/2g64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [https://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [https://pdbe.org/2g64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [https://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/PTPS_CAEEL PTPS_CAEEL]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~6-pyruvoyltetrahydropterin synthase]]~~	+	[[Category: Caenorhabditis elegans]]
-	~~[[Category: Caeel~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Burley~~, S K~~]]	+	[[Category: Burley SK]]
-	[[Category: Milstein, S]]	+	[[Category: Milstein S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Patskovsky Y]]
-	[[Category: Patskovsky, Y]]	+	[[Category: Ramagopal U]]
-	[[Category: Ramagopal, U]]	+	[[Category: Vidal M]]
-	[[Category: Vidal, M]]	+	[[Category: Wengerter BC]]
-	[[Category: Wengerter~~, B C~~]]	+	[[Category: Zhan C]]
-	[[Category: Zhan, C]]	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~	+
-	~~[[Category: Phosphate elimination]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Pterine synthesis]]~~	+
-	~~[[Category: Tetrahydrobiopterin biosynthesis~~]]	+

OCA at 17:30, 20 October 2021

OCA — Wed, 20 Oct 2021 17:30:12 GMT

←Older revision		Revision as of 17:30, 20 October 2021
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	==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==		==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==
-	<StructureSection load='2g64' size='340' side='right'caption='[[2g64]]' scene=''>	+	<StructureSection load='2g64' size='340' side='right'caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G64 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [https://pdbe.org/2g64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [https://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [https://pdbe.org/2g64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [https://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: 6-pyruvoyltetrahydropterin synthase]]
		+	[[Category: Caeel]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Almo SC]]	+	[[Category: Almo, S C]]
-	[[Category: Burley SK]]	+	[[Category: Burley, S K]]
-	[[Category: Milstein S]]	+	[[Category: Milstein, S]]
-	[[Category: Patskovsky Y]]	+	[[Category: Structural genomic]]
-	[[Category: Ramagopal U]]	+	[[Category: Patskovsky, Y]]
-	[[Category: Vidal M]]	+	[[Category: Ramagopal, U]]
-	[[Category: Wengerter BC]]	+	[[Category: Vidal, M]]
-	[[Category: Zhan C]]	+	[[Category: Wengerter, B C]]
		+	[[Category: Zhan, C]]
		+	[[Category: Lyase]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: Phosphate elimination]]
		+	[[Category: PSI, Protein structure initiative]]
		+	[[Category: Pterine synthesis]]
		+	[[Category: Tetrahydrobiopterin biosynthesis]]

OCA at 18:48, 10 March 2021

OCA — Wed, 10 Mar 2021 18:48:09 GMT

←Older revision		Revision as of 18:48, 10 March 2021
Line 1:		Line 1:

	==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==		==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==
-	<StructureSection load='2g64' size='340' side='right' caption='[[2g64]]~~, [[Resolution\|resolution]] 1.80Å~~' scene=''>	+	<StructureSection load='2g64' size='340' side='right'caption='[[2g64]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>~~[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caeel Caeel].~~ Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2G64 FirstGlance]. <br>	+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [https://pdbe.org/2g64 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [https://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [~~http~~://pdbe.org/2g64 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [~~http~~://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>	+
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~6-pyruvoyltetrahydropterin synthase]]~~	+	[[Category: Large Structures]]
-	~~[[Category: Caeel~~]]	+	[[Category: Almo SC]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Burley SK]]
-	[[Category: Burley~~, S K~~]]	+	[[Category: Milstein S]]
-	[[Category: Milstein, S]]	+	[[Category: Patskovsky Y]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Ramagopal U]]
-	[[Category: Patskovsky, Y]]	+	[[Category: Vidal M]]
-	[[Category: Ramagopal, U]]	+	[[Category: Wengerter BC]]
-	[[Category: Vidal, M]]	+	[[Category: Zhan C]]
-	[[Category: Wengerter~~, B C~~]]	+
-	[[Category: Zhan, C]]	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~	+
-	~~[[Category: Phosphate elimination]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Pterine synthesis]]~~	+
-	~~[[Category: Tetrahydrobiopterin biosynthesis~~]]	+

OCA at 06:47, 20 June 2018

OCA — Wed, 20 Jun 2018 06:47:57 GMT

←Older revision		Revision as of 06:47, 20 June 2018
Line 1:		Line 1:
		+
	==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==		==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==
	<StructureSection load='2g64' size='340' side='right' caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2g64' size='340' side='right' caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>
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	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://pdbe.org/2g64 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://pdbe.org/2g64 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2g64 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/2g64_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/2g64_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 18:24, 9 February 2016

OCA — Tue, 09 Feb 2016 18:24:05 GMT

←Older revision		Revision as of 18:24, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g64 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 00:51, 11 September 2015

OCA — Fri, 11 Sep 2015 00:51:11 GMT

←Older revision		Revision as of 00:51, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2g64' size='340' side='right' caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2g64' size='340' side='right' caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Caenorhabditis_elegans Caenorhabditis elegans~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G64 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caeel Caeel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 ~~Caenorhabditis elegans~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 CAEEL])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://pdbe.org/2g64 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: 6-pyruvoyltetrahydropterin synthase]]		[[Category: 6-pyruvoyltetrahydropterin synthase]]
-	[[Category: ~~Caenorhabditis elegans~~]]	+	[[Category: Caeel]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]

OCA at 13:15, 6 November 2014

OCA — Thu, 06 Nov 2014 13:15:57 GMT

←Older revision		Revision as of 13:15, 6 November 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G64 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 Caenorhabditis elegans])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 Caenorhabditis elegans])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	[[Category: 6-pyruvoyltetrahydropterin synthase]]		[[Category: 6-pyruvoyltetrahydropterin synthase]]
	[[Category: Caenorhabditis elegans]]		[[Category: Caenorhabditis elegans]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: Milstein, S.]]	+	[[Category: Milstein, S]]
-	[[Category: ~~NYSGXRC, New York SGX Research Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Patskovsky, Y.]]	+	[[Category: Patskovsky, Y]]
-	[[Category: Ramagopal, U.]]	+	[[Category: Ramagopal, U]]
-	[[Category: Vidal, M.]]	+	[[Category: Vidal, M]]
-	[[Category: Wengerter, B C.]]	+	[[Category: Wengerter, B C]]
-	[[Category: Zhan, C.]]	+	[[Category: Zhan, C]]
	[[Category: Lyase]]		[[Category: Lyase]]
-	[[Category: New ~~york sgx research center~~ for ~~structural genomic]]~~	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-	~~[[Category: Nysgxrc~~]]	+
	[[Category: Phosphate elimination]]		[[Category: Phosphate elimination]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi~~]]	+
	[[Category: Pterine synthesis]]		[[Category: Pterine synthesis]]
-	[[Category: Structural genomic]]
	[[Category: Tetrahydrobiopterin biosynthesis]]		[[Category: Tetrahydrobiopterin biosynthesis]]

OCA at 10:25, 30 September 2014

OCA — Tue, 30 Sep 2014 10:25:32 GMT

←Older revision		Revision as of 10:25, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2g64.png\|left\|200px]]~~	+	==Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase==
-		+	<StructureSection load='2g64' size='340' side='right' caption='[[2g64]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~{{STRUCTURE_2g64\| PDB=2g64 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G64 FirstGlance]. <br>
-	===Structure of Caenorhabditis elegans 6-pyruvoyl tetrahydropterin synthase===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">B0041.6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 Caenorhabditis elegans])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/6-pyruvoyltetrahydropterin_synthase 6-pyruvoyltetrahydropterin synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.12 4.2.3.12] </span></td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g64 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g64 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g64 RCSB], [http://www.ebi.ac.uk/pdbsum/2g64 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2g64 TOPSAN]</span></td></tr>
-	[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/2g64_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: 6-pyruvoyltetrahydropterin synthase]]		[[Category: 6-pyruvoyltetrahydropterin synthase]]
	[[Category: Caenorhabditis elegans]]		[[Category: Caenorhabditis elegans]]

OCA: Protected "2g64" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 12:16:16 GMT

Protected "2g64" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:16, 7 January 2013

OCA at 12:16, 7 January 2013

OCA — Mon, 07 Jan 2013 12:16:13 GMT

←Older revision		Revision as of 12:16, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2g64.png\|left\|200px]]		[[Image:2g64.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2g64", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2g64\| PDB=2g64 \| SCENE= }}		{{STRUCTURE_2g64\| PDB=2g64 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2G64~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA].	+	[[2g64]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G64 OCA].
	[[Category: 6-pyruvoyltetrahydropterin synthase]]		[[Category: 6-pyruvoyltetrahydropterin synthase]]
	[[Category: Caenorhabditis elegans]]		[[Category: Caenorhabditis elegans]]
Line 20:		Line 13:
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]
	[[Category: Milstein, S.]]		[[Category: Milstein, S.]]
-	[[Category: NYSGXRC, New York ~~Structural GenomiX~~ Research ~~Consortium~~.]]	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
	[[Category: Patskovsky, Y.]]		[[Category: Patskovsky, Y.]]
	[[Category: Ramagopal, U.]]		[[Category: Ramagopal, U.]]
Line 26:		Line 19:
	[[Category: Wengerter, B C.]]		[[Category: Wengerter, B C.]]
	[[Category: Zhan, C.]]		[[Category: Zhan, C.]]
-	[[Category: New york ~~structural genomix~~ research ~~consortium~~]]	+	[[Category: Lyase]]
		+	[[Category: New york sgx research center for structural genomic]]
	[[Category: Nysgxrc]]		[[Category: Nysgxrc]]
	[[Category: Phosphate elimination]]		[[Category: Phosphate elimination]]
Line 34:		Line 28:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Tetrahydrobiopterin biosynthesis]]		[[Category: Tetrahydrobiopterin biosynthesis]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:29:50 2008''