2gfg - Revision history

OCA at 06:45, 25 January 2023

OCA — Wed, 25 Jan 2023 06:45:21 GMT

←Older revision		Revision as of 06:45, 25 January 2023
Line 3:		Line 3:
	<StructureSection load='2gfg' size='340' side='right'caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>		<StructureSection load='2gfg' size='340' side='right'caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_alcalophilus_subsp._halodurans"_boyer_et_al._1973 "bacillus alcalophilus subsp.~~ halodurans~~" boyer et al. 1973~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GFG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GFG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:~~SODIUM+ION~~'>NA</scene>, <scene name='pdbligand=~~UNL~~:~~UNKNOWN~~+~~LIGAND~~'>~~UNL~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [https://pdbe.org/2gfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [https://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfg ProSAT], [https://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [https://pdbe.org/2gfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [https://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfg ProSAT], [https://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9K901_HALH5 Q9K901_HALH5]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus alcalophilus subsp.~~ halodurans ~~boyer et al. 1973~~]]	+	[[Category: Alkalihalobacillus halodurans]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Antiparallel barrel]]
-	[[Category: Jcsg]]
-	[[Category: PSI, Protein structure initiative]]
-	[[Category: Unknown function]]

OCA at 19:00, 10 March 2021

OCA — Wed, 10 Mar 2021 19:00:53 GMT

OCA at 07:00, 20 June 2018

OCA — Wed, 20 Jun 2018 07:00:35 GMT

←Older revision		Revision as of 07:00, 20 June 2018
Line 1:		Line 1:
		+
	==Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution==		==Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution==
	<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>		<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://pdbe.org/2gfg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://pdbe.org/2gfg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfg ProSAT], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gfg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gfg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 04:40, 7 February 2016

OCA — Sun, 07 Feb 2016 04:40:41 GMT

←Older revision		Revision as of 04:40, 7 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gfg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 21:56, 9 September 2015

OCA — Wed, 09 Sep 2015 21:56:36 GMT

←Older revision		Revision as of 21:56, 9 September 2015
Line 2:		Line 2:
	<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>		<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_halodurans Bacillus~~ halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GFG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_alcalophilus_subsp._halodurans"_boyer_et_al._1973 "bacillus alcalophilus subsp. halodurans" boyer et al. 1973]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GFG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://pdbe.org/2gfg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacillus halodurans]]	+	[[Category: Bacillus alcalophilus subsp. halodurans boyer et al. 1973]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Antiparallel barrel]]		[[Category: Antiparallel barrel]]

OCA at 07:56, 24 December 2014

OCA — Wed, 24 Dec 2014 07:56:10 GMT

←Older revision		Revision as of 07:56, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GFG FirstGlance]. <br>		<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GFG FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Bacillus halodurans]]		[[Category: Bacillus halodurans]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Antiparallel barrel]]		[[Category: Antiparallel barrel]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 08:42, 30 September 2014

OCA — Tue, 30 Sep 2014 08:42:23 GMT

←Older revision		Revision as of 08:42, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2gfg.png\|left\|200px]]~~	+	==Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution==
-		+	<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>
-	~~{{STRUCTURE_2gfg\| PDB=2gfg \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GFG FirstGlance]. <br>
-	===Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [http://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [http://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
-	[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/2gfg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus halodurans]]		[[Category: Bacillus halodurans]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]

OCA at 13:18, 30 January 2013

OCA — Wed, 30 Jan 2013 13:18:34 GMT

←Older revision		Revision as of 13:18, 30 January 2013
Line 1:		Line 1:
	[[Image:2gfg.png\|left\|200px]]		[[Image:2gfg.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2gfg", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2gfg\| PDB=2gfg \| SCENE= }}		{{STRUCTURE_2gfg\| PDB=2gfg \| SCENE= }}

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	[[Category: Bacillus halodurans]]		[[Category: Bacillus halodurans]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: Antiparallel barrel]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]

OCA: Protected "2gfg" [edit=sysop:move=sysop]

OCA — Wed, 23 Mar 2011 06:23:29 GMT

Protected "2gfg" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:23, 23 March 2011

OCA at 06:23, 23 March 2011

OCA — Wed, 23 Mar 2011 06:23:28 GMT

←Older revision		Revision as of 06:23, 23 March 2011
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-	{{Seed}}
	[[Image:2gfg.png\|left\|200px]]		[[Image:2gfg.png\|left\|200px]]

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	{{STRUCTURE_2gfg\| PDB=2gfg \| SCENE= }}		{{STRUCTURE_2gfg\| PDB=2gfg \| SCENE= }}

-	===Crystal structure of ~~protein BH2851~~ (~~10175472~~) from ~~Bacillus~~ halodurans at 2.12 A resolution===	+	===Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution===


	==About this Structure==		==About this Structure==
-	~~2GFG~~ is a 3 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA].	+	[[2gfg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA].
	[[Category: Bacillus halodurans]]		[[Category: Bacillus halodurans]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]
-	[[Category: 10175472]]
-	[[Category: Jcsg]]
-	[[Category: Joint center for structural genomic]]
-	[[Category: Protein structure initiative]]
-	[[Category: Psi]]
-	[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:04:44 2008''

←Older revision		Revision as of 19:00, 10 March 2021
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	==Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution==		==Crystal structure of a putative adenylate cyclase (bh2851) from bacillus halodurans at 2.12 A resolution==
-	<StructureSection load='2gfg' size='340' side='right' caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>	+	<StructureSection load='2gfg' size='340' side='right'caption='[[2gfg]], [[Resolution\|resolution]] 2.12Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_alcalophilus_subsp._halodurans"_boyer_et_al._1973 "bacillus alcalophilus subsp. halodurans" boyer et al. 1973]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2GFG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gfg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_alcalophilus_subsp._halodurans"_boyer_et_al._1973 "bacillus alcalophilus subsp. halodurans" boyer et al. 1973]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GFG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">10175472 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 "Bacillus alcalophilus subsp. halodurans" Boyer et al. 1973])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [~~http~~://pdbe.org/2gfg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfg ProSAT], [~~http~~://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gfg OCA], [https://pdbe.org/2gfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gfg RCSB], [https://www.ebi.ac.uk/pdbsum/2gfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gfg ProSAT], [https://www.topsan.org/Proteins/JCSG/2gfg TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus alcalophilus subsp. halodurans boyer et al. 1973]]		[[Category: Bacillus alcalophilus subsp. halodurans boyer et al. 1973]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Antiparallel barrel]]		[[Category: Antiparallel barrel]]