2gqd - Revision history

OCA at 09:29, 14 February 2024

OCA — Wed, 14 Feb 2024 09:29:19 GMT

←Older revision		Revision as of 09:29, 14 February 2024
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	<StructureSection load='2gqd' size='340' side='right'caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2gqd' size='340' side='right'caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQD FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>fabF ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~1280~~ "~~Micrococcus aureus~~" ~~(Rosenbach 1884) Zopf 1885])</td~~>~~</tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	~~<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-ketoacyl~~-[~~acyl-carrier-protein]_synthase_I Beta-ketoacyl-~~[~~acyl-carrier-protein~~] ~~synthase I~~]~~, with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=~~2.3~~.1.41 2.3.1.41] </span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [https://pdbe.org/2gqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [https://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [https://pdbe.org/2gqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [https://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW]] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).	+	[https://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Miller, D J~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~Rock, C O~~]]	+	[[Category: Miller DJ]]
-	[[Category: ~~White, S W~~]]	+	[[Category: Rock CO]]
-	[[Category: ~~Zhang, Y M~~]]	+	[[Category: White SW]]
-	[[Category: ~~Duplicated babababb fold]]~~	+	[[Category: Zhang YM]]
-	~~[[Category: Transferase~~]]	+

OCA at 19:13, 10 March 2021

OCA — Wed, 10 Mar 2021 19:13:37 GMT

←Older revision		Revision as of 19:13, 10 March 2021
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	==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==		==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==
-	<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='2gqd' size='340' side='right'caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2GQD FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [~~http~~://pdbe.org/2gqd PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [https://pdbe.org/2gqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [https://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW]] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).	+	[[https://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW]] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqd_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqd_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 20:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqd ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqd ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Acyl carrier protein synthase 3D structures\|Acyl carrier protein synthase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Miller, D J]]		[[Category: Miller, D J]]
	[[Category: Rock, C O]]		[[Category: Rock, C O]]

OCA at 07:58, 18 October 2017

OCA — Wed, 18 Oct 2017 07:58:21 GMT

←Older revision		Revision as of 07:58, 18 October 2017
Line 1:		Line 1:
		+
	==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==		==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==
	<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>
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	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://pdbe.org/2gqd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://pdbe.org/2gqd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqd ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[Acyl carrier protein synthase\|Acyl carrier protein synthase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 21:55, 11 September 2015

OCA — Fri, 11 Sep 2015 21:55:37 GMT

←Older revision		Revision as of 21:55, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus~~ aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 ~~Staphylococcus~~ aureus])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-acyl-carrier-~~protein_synthase_I~~ Beta-ketoacyl-acyl-carrier-protein synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://pdbe.org/2gqd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]
-	[[Category: Staphylococcus aureus]]
	[[Category: Miller, D J]]		[[Category: Miller, D J]]
	[[Category: Rock, C O]]		[[Category: Rock, C O]]

OCA at 20:06, 25 December 2014

OCA — Thu, 25 Dec 2014 20:06:20 GMT

←Older revision		Revision as of 20:06, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>		<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-acyl-carrier-protein_synthase_I Beta-ketoacyl-acyl-carrier-protein synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-acyl-carrier-protein_synthase_I Beta-ketoacyl-acyl-carrier-protein synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW]] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 26:
	[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]		[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
-	[[Category: Miller, D J.]]	+	[[Category: Miller, D J]]
-	[[Category: Rock, C O.]]	+	[[Category: Rock, C O]]
-	[[Category: White, S W.]]	+	[[Category: White, S W]]
-	[[Category: Zhang, Y M.]]	+	[[Category: Zhang, Y M]]
	[[Category: Duplicated babababb fold]]		[[Category: Duplicated babababb fold]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 03:27, 29 September 2014

OCA — Mon, 29 Sep 2014 03:27:04 GMT

←Older revision		Revision as of 03:27, 29 September 2014
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-	~~[[Image:2gqd.png\|left\|200px]]~~	+	==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==
-		+	<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution\|resolution]] 2.30Å' scene=''>
-	~~{{STRUCTURE_2gqd\| PDB=2gqd \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-	===The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-acyl-carrier-protein_synthase_I Beta-ketoacyl-acyl-carrier-protein synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqd_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Acyl carrier protein synthase\|Acyl carrier protein synthase]]		*[[Acyl carrier protein synthase\|Acyl carrier protein synthase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]		[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]

OCA at 20:55, 20 October 2012

OCA — Sat, 20 Oct 2012 20:55:16 GMT

←Older revision		Revision as of 20:55, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[2gqd]] is a 2 chain structure ~~of [[Acyl carrier protein synthase]]~~ with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].	+	[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].

	==See Also==		==See Also==

OCA: Protected "2gqd" [edit=sysop:move=sysop]

OCA — Fri, 27 Jul 2012 12:02:51 GMT

Protected "2gqd" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:02, 27 July 2012

OCA at 12:02, 27 July 2012

OCA — Fri, 27 Jul 2012 12:02:49 GMT

←Older revision		Revision as of 12:02, 27 July 2012
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-	{{Seed}}
	[[Image:2gqd.png\|left\|200px]]		[[Image:2gqd.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2gqd", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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	{{STRUCTURE_2gqd\| PDB=2gqd \| SCENE= }}		{{STRUCTURE_2gqd\| PDB=2gqd \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2GQD~~ is a 2 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].	+	[[2gqd]] is a 2 chain structure of [[Acyl carrier protein synthase]] with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].
		+
		+	==See Also==
		+	*[[Acyl carrier protein synthase\|Acyl carrier protein synthase]]
	[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]		[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
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	[[Category: Zhang, Y M.]]		[[Category: Zhang, Y M.]]
	[[Category: Duplicated babababb fold]]		[[Category: Duplicated babababb fold]]
-		+	[[Category: Transferase]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Wed Feb 18 05:37:48 2009''~~	+

OCA at 03:37, 18 February 2009

OCA — Wed, 18 Feb 2009 03:37:50 GMT

←Older revision		Revision as of 03:37, 18 February 2009
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-	[[Image:2gqd.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2gqd.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2gqd\| PDB=2gqd \| SCENE= }}		{{STRUCTURE_2gqd\| PDB=2gqd \| SCENE= }}

-	~~'''~~The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus~~'''~~	+	===The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus===


	==About this Structure==		==About this Structure==
-	2GQD is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].	+	2GQD is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA].
	[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]		[[Category: Beta-ketoacyl-acyl-carrier-protein synthase I]]
-	[[Category: Single protein]]
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Miller, D J.]]		[[Category: Miller, D J.]]
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	[[Category: Zhang, Y M.]]		[[Category: Zhang, Y M.]]
	[[Category: Duplicated babababb fold]]		[[Category: Duplicated babababb fold]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun May 4~~ 05:24:~~02 2008~~''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:37:48 2009''