2jra - Revision history

OCA at 10:11, 20 December 2023

OCA — Wed, 20 Dec 2023 10:11:43 GMT

←Older revision		Revision as of 10:11, 20 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRA FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [https://pdbe.org/2jra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [https://www.ebi.ac.uk/pdbsum/2jra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [https://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [https://pdbe.org/2jra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [https://www.ebi.ac.uk/pdbsum/2jra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [https://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 08:36, 14 June 2023

OCA — Wed, 14 Jun 2023 08:36:32 GMT

←Older revision		Revision as of 08:36, 14 June 2023
Line 1:		Line 1:

	==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==		==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==
-	<StructureSection load='2jra' size='340' side='right'caption='[[2jra~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2jra' size='340' side='right'caption='[[2jra]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Rhopa Rhopa~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	</td></tr>~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [https://pdbe.org/2jra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [https://www.ebi.ac.uk/pdbsum/2jra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [https://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [https://pdbe.org/2jra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [https://www.ebi.ac.uk/pdbsum/2jra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [https://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q6N7Y3_RHOPA Q6N7Y3_RHOPA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Rhopa~~]]	+	[[Category: Rhodopseudomonas palustris CGA009]]
-	[[Category: Arrowsmith~~, C H~~]]	+	[[Category: Arrowsmith CH]]
-	[[Category: Bansal, S]]	+	[[Category: Bansal S]]
-	[[Category: Cort, J]]	+	[[Category: Cort J]]
-	[[Category: Guido, V]]	+	[[Category: Guido V]]
-	[[Category: Kennedy~~, M A~~]]	+	[[Category: Kennedy MA]]
-	[[Category: Lemak, A]]	+	[[Category: Lemak A]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Prestegard JH]]
-	[[Category: Prestegard~~, J H~~]]	+	[[Category: Semest A]]
-	[[Category: Semest, A]]	+	[[Category: Wu B]]
-	[[Category: Wu, B]]	+	[[Category: Yee A]]
-	[[Category: Yee, A]]	+
-	~~[[Category: Domain-swapped dimer]]~~	+
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 13:24, 24 November 2021

OCA — Wed, 24 Nov 2021 13:24:43 GMT

←Older revision		Revision as of 13:24, 24 November 2021
Line 3:		Line 3:
	<StructureSection load='2jra' size='340' side='right'caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2jra' size='340' side='right'caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2JRA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [~~http~~://pdbe.org/2jra PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2jra PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [https://pdbe.org/2jra PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [https://www.ebi.ac.uk/pdbsum/2jra PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [https://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 06:49, 19 February 2020

OCA — Wed, 19 Feb 2020 06:49:02 GMT

←Older revision		Revision as of 06:49, 19 February 2020
Line 1:		Line 1:

	==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==		==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==
-	<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2jra' size='340' side='right'caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Rhopa]]		[[Category: Rhopa]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]

OCA at 06:46, 11 July 2018

OCA — Wed, 11 Jul 2018 06:46:18 GMT

←Older revision		Revision as of 06:46, 11 July 2018
Line 1:		Line 1:
		+
	==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==		==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==
	<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://pdbe.org/2jra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://pdbe.org/2jra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2jra ProSAT], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jra_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jra_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jra ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 02:15, 12 September 2015

OCA — Sat, 12 Sep 2015 02:15:07 GMT

←Older revision		Revision as of 02:15, 12 September 2015
Line 2:		Line 2:
	<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Rhodopseudomonas_palustris Rhodopseudomonas palustris~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhopa Rhopa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1076 Rhodopseudomonas palustris~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=258594 RHOPA])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://pdbe.org/2jra PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Rhodopseudomonas palustris~~]]	+	[[Category: Rhopa]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]
	[[Category: Bansal, S]]		[[Category: Bansal, S]]

OCA at 22:33, 25 December 2014

OCA — Thu, 25 Dec 2014 22:33:32 GMT

←Older revision		Revision as of 22:33, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 Rhodopseudomonas palustris])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 Rhodopseudomonas palustris])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Rhodopseudomonas palustris]]		[[Category: Rhodopseudomonas palustris]]
-	[[Category: Arrowsmith, C H.]]	+	[[Category: Arrowsmith, C H]]
-	[[Category: Bansal, S.]]	+	[[Category: Bansal, S]]
-	[[Category: Cort, J.]]	+	[[Category: Cort, J]]
-	[[Category: Guido, V.]]	+	[[Category: Guido, V]]
-	[[Category: Kennedy, M A.]]	+	[[Category: Kennedy, M A]]
-	[[Category: Lemak, A.]]	+	[[Category: Lemak, A]]
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Prestegard, J H.]]	+	[[Category: Prestegard, J H]]
-	[[Category: Semest, A.]]	+	[[Category: Semest, A]]
-	[[Category: Wu, B.]]	+	[[Category: Wu, B]]
-	[[Category: Yee, A.]]	+	[[Category: Yee, A]]
	[[Category: Domain-swapped dimer]]		[[Category: Domain-swapped dimer]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: ~~Northeast structural genomics consortium]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 10:33, 30 September 2014

OCA — Tue, 30 Sep 2014 10:33:16 GMT

←Older revision		Revision as of 10:33, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2jra.png\|left\|200px]]~~	+	==A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6==
-		+	<StructureSection load='2jra' size='340' side='right' caption='[[2jra]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2jra\| PDB=2jra \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JRA FirstGlance]. <br>
-	===A novel domain-swapped solution NMR structure of protein RPA2121 from Rhodopseudomonas palustris. Northeast Structural Genomics Target RpT6===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">RPA2121 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 Rhodopseudomonas palustris])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jra FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jra OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jra RCSB], [http://www.ebi.ac.uk/pdbsum/2jra PDBsum], [http://www.topsan.org/Proteins/NESGC/2jra TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jra_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Rhodopseudomonas palustris]]		[[Category: Rhodopseudomonas palustris]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]

OCA: Protected "2jra" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 15:01:43 GMT

Protected "2jra" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:01, 7 January 2013

OCA at 15:01, 7 January 2013

OCA — Mon, 07 Jan 2013 15:01:40 GMT

←Older revision		Revision as of 15:01, 7 January 2013
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-	{{Seed}}
	[[Image:2jra.png\|left\|200px]]		[[Image:2jra.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2jra", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2jra\| PDB=2jra \| SCENE= }}		{{STRUCTURE_2jra\| PDB=2jra \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2JRA~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA].	+	[[2jra]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JRA OCA].
	[[Category: Rhodopseudomonas palustris]]		[[Category: Rhodopseudomonas palustris]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]
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	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 18:12:00 2008''~~	+