2kgo - Revision history

OCA at 09:47, 9 May 2024

OCA — Thu, 09 May 2024 09:47:36 GMT

←Older revision		Revision as of 09:47, 9 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [https://pdbe.org/2kgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [https://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [https://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [https://pdbe.org/2kgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [https://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [https://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
	</table>		</table>

OCA at 08:44, 14 June 2023

OCA — Wed, 14 Jun 2023 08:44:26 GMT

←Older revision		Revision as of 08:44, 14 June 2023
Line 1:		Line 1:

	==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==		==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==
-	<StructureSection load='2kgo' size='340' side='right'caption='[[2kgo~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2kgo' size='340' side='right'caption='[[2kgo]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [https://pdbe.org/2kgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [https://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [https://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [https://pdbe.org/2kgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [https://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [https://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/YBII_ECOLI YBII_ECOLI]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Arrowsmith~~, C H~~]]	+	[[Category: Arrowsmith CH]]
-	[[Category: Fares, C]]	+	[[Category: Fares C]]
-	[[Category: Guido, V]]	+	[[Category: Guido V]]
-	[[Category: Gutmanas, A]]	+	[[Category: Gutmanas A]]
-	[[Category: Lemak, A]]	+	[[Category: Lemak A]]
-	~~[[Category: Structural genomic]]~~	+	[[Category: Yee A]]
-	~~[[Category: OCSP, Ontario Centre for Structural Proteomics~~]]	+
-	[[Category: Yee, A]]	+
-	~~[[Category: Metal-binding]]~~	+
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: Ocsp]]~~	+
-	~~[[Category: Ontario centre for structural proteomic]]~~	+
-	~~[[Category: Partially disordered]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Structural proteomic]]~~	+
-	~~[[Category: Unknown function]]~~	+
-	~~[[Category: Zinc-finger]]~~	+
-	~~[[Category: Zn finger~~]]	+

OCA at 07:05, 1 December 2021

OCA — Wed, 01 Dec 2021 07:05:05 GMT

←Older revision		Revision as of 07:05, 1 December 2021
Line 3:		Line 3:
	<StructureSection load='2kgo' size='340' side='right'caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kgo' size='340' side='right'caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2KGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [~~http~~://pdbe.org/2kgo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [https://pdbe.org/2kgo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [https://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [https://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 09:35, 26 February 2020

OCA — Wed, 26 Feb 2020 09:35:37 GMT

←Older revision		Revision as of 09:35, 26 February 2020
Line 1:		Line 1:

	==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==		==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==
-	<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2kgo' size='340' side='right'caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]
	[[Category: Fares, C]]		[[Category: Fares, C]]

OCA at 10:48, 18 July 2018

OCA — Wed, 18 Jul 2018 10:48:21 GMT

←Older revision		Revision as of 10:48, 18 July 2018
Line 1:		Line 1:
		+
	==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==		==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==
	<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://pdbe.org/2kgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://pdbe.org/2kgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kgo ProSAT], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/2kgo_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/2kgo_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 06:28, 10 February 2016

OCA — Wed, 10 Feb 2016 06:28:03 GMT

←Older revision		Revision as of 06:28, 10 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kgo ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 06:16, 11 September 2015

OCA — Fri, 11 Sep 2015 06:16:12 GMT

←Older revision		Revision as of 06:16, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~562 Escherichia coli~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://pdbe.org/2kgo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]
	[[Category: Fares, C]]		[[Category: Fares, C]]

OCA at 12:26, 25 December 2014

OCA — Thu, 25 Dec 2014 12:26:24 GMT

←Older revision		Revision as of 12:26, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Arrowsmith, C H.]]	+	[[Category: Arrowsmith, C H]]
-	[[Category: Fares, C.]]	+	[[Category: Fares, C]]
-	[[Category: Guido, V.]]	+	[[Category: Guido, V]]
-	[[Category: Gutmanas, A.]]	+	[[Category: Gutmanas, A]]
-	[[Category: Lemak, A.]]	+	[[Category: Lemak, A]]
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: OCSP, Ontario Centre for Structural Proteomics.]]	+	[[Category: OCSP, Ontario Centre for Structural Proteomics]]
-	[[Category: Yee, A.]]	+	[[Category: Yee, A]]
	[[Category: Metal-binding]]		[[Category: Metal-binding]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: Northeast structural genomics consortium]]
	[[Category: Ocsp]]		[[Category: Ocsp]]
	[[Category: Ontario centre for structural proteomic]]		[[Category: Ontario centre for structural proteomic]]
	[[Category: Partially disordered]]		[[Category: Partially disordered]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Structural proteomic]]		[[Category: Structural proteomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
	[[Category: Zinc-finger]]		[[Category: Zinc-finger]]
	[[Category: Zn finger]]		[[Category: Zn finger]]

OCA at 03:34, 29 September 2014

OCA — Mon, 29 Sep 2014 03:34:14 GMT

←Older revision		Revision as of 03:34, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:2kgo.png\|left\|200px]]~~	+	==Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402==
-		+	<StructureSection load='2kgo' size='340' side='right' caption='[[2kgo]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2kgo\| PDB=2kgo \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KGO FirstGlance]. <br>
-	===Solution NMR structure of Zn finger protein YBIL from Escherichia coli. NESG target ET107, OCSP target EC0402===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">b0803, JW0788, ybiI, ybil ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kgo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kgo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kgo RCSB], [http://www.ebi.ac.uk/pdbsum/2kgo PDBsum], [http://www.topsan.org/Proteins/NESGC/2kgo TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2kgo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KGO OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kg/2kgo_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]

OCA: Protected "2kgo" [edit=sysop:move=sysop]

OCA — Sun, 21 Oct 2012 11:24:10 GMT

Protected "2kgo" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:24, 21 October 2012