2lbu - Revision history

OCA at 12:15, 15 November 2023

OCA — Wed, 15 Nov 2023 12:15:19 GMT

←Older revision		Revision as of 12:15, 15 November 2023
Line 1:		Line 1:

	==HADDOCK calculated model of Congo red bound to the HET-s amyloid==		==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
-	<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu~~]], [[NMR_Ensembles_of_Models \| 4 NMR models~~]]' scene=''>	+	<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Podas Podas~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CGO:SODIUM+3,3~~-~~(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[2rnm\|2rnm]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [https://pdbe.org/2lbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [https://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [https://pdbe.org/2lbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [https://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>	+	[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
	== References ==		== References ==
	<references/>		<references/>
Line 15:		Line 15:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Podas~~]]	+	[[Category: Podospora anserina]]
-	[[Category: Aguzzi, A]]	+	[[Category: Aguzzi A]]
-	[[Category: Bockmann, A]]	+	[[Category: Bockmann A]]
-	[[Category: Ernst, M]]	+	[[Category: Ernst M]]
-	[[Category: Hornemann, S]]	+	[[Category: Hornemann S]]
-	[[Category: Meier~~, B H~~]]	+	[[Category: Meier BH]]
-	[[Category: Schutz~~, A K~~]]	+	[[Category: Schutz AK]]
-	[[Category: Soragni, A]]	+	[[Category: Soragni A]]
-	~~[[Category: Amyloid]]~~	+
-	~~[[Category: Amyloid dye]]~~	+
-	~~[[Category: Congo red]]~~	+
-	~~[[Category: Ligand]]~~	+
-	~~[[Category: Prion protein]]~~	+
-	~~[[Category: Protein fibril~~]]	+

OCA at 07:50, 9 February 2022

OCA — Wed, 09 Feb 2022 07:50:27 GMT

←Older revision		Revision as of 07:50, 9 February 2022
Line 3:		Line 3:
	<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>		<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2rnm\|2rnm]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [~~http~~://pdbe.org/2lbu PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [https://pdbe.org/2lbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [https://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>	+	[[https://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:02, 6 May 2020

OCA — Wed, 06 May 2020 07:02:16 GMT

←Older revision		Revision as of 07:02, 6 May 2020
Line 1:		Line 1:

	==HADDOCK calculated model of Congo red bound to the HET-s amyloid==		==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
-	<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>	+	<StructureSection load='2lbu' size='340' side='right'caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2LBU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://pdbe.org/2lbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://pdbe.org/2lbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Podas]]		[[Category: Podas]]
	[[Category: Aguzzi, A]]		[[Category: Aguzzi, A]]

OCA at 19:39, 1 August 2018

OCA — Wed, 01 Aug 2018 19:39:02 GMT

←Older revision		Revision as of 19:39, 1 August 2018
Line 1:		Line 1:
		+
	==HADDOCK calculated model of Congo red bound to the HET-s amyloid==		==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
	<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>		<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://pdbe.org/2lbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://pdbe.org/2lbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lbu ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 22:52, 9 September 2015

OCA — Wed, 09 Sep 2015 22:52:54 GMT

←Older revision		Revision as of 22:52, 9 September 2015
Line 2:		Line 2:
	<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>		<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Podospora_anserina Podospora anserina~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LBU FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podas Podas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://pdbe.org/2lbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~Q03689_PODAN Q03689_PODAN~~]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>	+	[[http://www.uniprot.org/uniprot/HETS_PODAS HETS_PODAS]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Podospora anserina~~]]	+	[[Category: Podas]]
	[[Category: Aguzzi, A]]		[[Category: Aguzzi, A]]
	[[Category: Bockmann, A]]		[[Category: Bockmann, A]]

OCA at 08:44, 24 December 2014

OCA — Wed, 24 Dec 2014 08:44:37 GMT

←Older revision		Revision as of 08:44, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q03689_PODAN Q03689_PODAN]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:07, 18 December 2014

OCA — Thu, 18 Dec 2014 12:07:15 GMT

←Older revision		Revision as of 12:07, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_2lbu\| PDB=2lbu \| SCENE= }}~~	+	==HADDOCK calculated model of Congo red bound to the HET-s amyloid==
-	===HADDOCK calculated model of Congo red bound to the HET-s amyloid===	+	<StructureSection load='2lbu' size='340' side='right' caption='[[2lbu]], [[NMR_Ensembles_of_Models \| 4 NMR models]]' scene=''>
-		+	== Structural highlights ==
-	==~~Function~~==	+	<table><tr><td colspan='2'>[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LBU FirstGlance]. <br>
-	[[~~http://www.uniprot.org/uniprot/Q03689_PODAN Q03689_PODAN~~]] ~~Responsible for heterokaryon incompatibility~~, ~~a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait~~ [~~het-s~~]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>~~PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CGO:SODIUM+3,3-(1E,1E)-BIPHENYL-4,4-DIYLBIS(DIAZENE-2,1-DIYL)BIS(4-AMINONAPHTHALENE-1-SULFONATE)'>CGO</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2rnm\|2rnm]]</td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lbu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lbu RCSB], [http://www.ebi.ac.uk/pdbsum/2lbu PDBsum]</span></td></tr>
-	[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA].	+	</table>
-		+	__TOC__
-	==~~Reference~~==	+	</StructureSection>
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~021591034~~</~~ref~~><~~references group~~="~~xtra~~"/><~~references~~/>	+
	[[Category: Podospora anserina]]		[[Category: Podospora anserina]]
-	[[Category: Aguzzi, A.]]	+	[[Category: Aguzzi, A]]
-	[[Category: Bockmann, A.]]	+	[[Category: Bockmann, A]]
-	[[Category: Ernst, M.]]	+	[[Category: Ernst, M]]
-	[[Category: Hornemann, S.]]	+	[[Category: Hornemann, S]]
-	[[Category: Meier, B H.]]	+	[[Category: Meier, B H]]
-	[[Category: Schutz, A K.]]	+	[[Category: Schutz, A K]]
-	[[Category: Soragni, A.]]	+	[[Category: Soragni, A]]
	[[Category: Amyloid]]		[[Category: Amyloid]]
	[[Category: Amyloid dye]]		[[Category: Amyloid dye]]

OCA at 02:43, 4 April 2013

OCA — Thu, 04 Apr 2013 02:43:26 GMT

←Older revision		Revision as of 02:43, 4 April 2013
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-	[[Image:2lbu.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_2lbu", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2lbu\| PDB=2lbu \| SCENE= }}		{{STRUCTURE_2lbu\| PDB=2lbu \| SCENE= }}
-
	===HADDOCK calculated model of Congo red bound to the HET-s amyloid===		===HADDOCK calculated model of Congo red bound to the HET-s amyloid===

		+	==Function==
		+	[[http://www.uniprot.org/uniprot/Q03689_PODAN Q03689_PODAN]] Responsible for heterokaryon incompatibility, a process that ensures that during spontaneous, vegetative cell fusion only compatible cells from the same colony survive (non-self-recognition). Forms a prion for the non-Mendelian trait [het-s]. Interacts with het-S from incompatible cells to trigger a lethal reaction that prevents the formation of viable heterokaryons. It is unknown if the native, soluble protein has a cellular function.<ref>PMID:1886611</ref> <ref>PMID:8224826</ref> <ref>PMID:9275200</ref>

	==About this Structure==		==About this Structure==
Line 16:		Line 9:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:021591034</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021591034</ref><references group="xtra"/><references/>
	[[Category: Podospora anserina]]		[[Category: Podospora anserina]]
	[[Category: Aguzzi, A.]]		[[Category: Aguzzi, A.]]
Line 25:		Line 18:
	[[Category: Schutz, A K.]]		[[Category: Schutz, A K.]]
	[[Category: Soragni, A.]]		[[Category: Soragni, A.]]
		+	[[Category: Amyloid]]
		+	[[Category: Amyloid dye]]
		+	[[Category: Congo red]]
		+	[[Category: Ligand]]
		+	[[Category: Prion protein]]
		+	[[Category: Protein fibril]]

OCA at 05:46, 1 June 2011

OCA — Wed, 01 Jun 2011 05:46:46 GMT

←Older revision		Revision as of 05:46, 1 June 2011
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-	~~'''Unreleased structure'''~~	+	[[Image:2lbu.jpg\|left\|200px]]

-	The ~~entry 2lbu~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2lbu", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2lbu\| PDB=2lbu \| SCENE= }}

-	~~Authors: Schuetz, A.K., Soragni, A., Hornemann, S., Aguzzi, A., Ernst, M., Bockmann, A., Meier, B.H.~~	+	===HADDOCK calculated model of Congo red bound to the HET-s amyloid===

-	~~Description~~: ~~HADDOCK calculated model of Congo red bound to the HET~~-~~s amyloid~~	+
		+	==About this Structure==
		+	[[2lbu]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Podospora_anserina Podospora anserina]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LBU OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021591034</ref><references group="xtra"/>
		+	[[Category: Podospora anserina]]
		+	[[Category: Aguzzi, A.]]
		+	[[Category: Bockmann, A.]]
		+	[[Category: Ernst, M.]]
		+	[[Category: Hornemann, S.]]
		+	[[Category: Meier, B H.]]
		+	[[Category: Schutz, A K.]]
		+	[[Category: Soragni, A.]]

OCA: Protected "2lbu" [edit=sysop:move=sysop]

OCA — Wed, 13 Apr 2011 04:44:28 GMT

Protected "2lbu" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:44, 13 April 2011