2ljl - Revision history

OCA at 05:44, 15 May 2024

OCA — Wed, 15 May 2024 05:44:42 GMT

←Older revision		Revision as of 05:44, 15 May 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJL FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [https://pdbe.org/2ljl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [https://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [https://pdbe.org/2ljl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [https://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 11:03, 15 February 2023

OCA — Wed, 15 Feb 2023 11:03:28 GMT

←Older revision		Revision as of 11:03, 15 February 2023
Line 1:		Line 1:

	==NMR structure of Hsp12 in the presence of DPC==		==NMR structure of Hsp12 in the presence of DPC==
-	<StructureSection load='2ljl' size='340' side='right'caption='[[2ljl~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2ljl' size='340' side='right'caption='[[2ljl]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [https://pdbe.org/2ljl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [https://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [https://pdbe.org/2ljl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [https://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/HSP12_YEAST HSP12_YEAST]] May play a role in a switch from carbohydrate utilizing metabolism to fatty acid utilizing metabolism.	+	[https://www.uniprot.org/uniprot/HSP12_YEAST HSP12_YEAST] May play a role in a switch from carbohydrate utilizing metabolism to fatty acid utilizing metabolism.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Baker's yeast]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: Saccharomyces cerevisiae S288C]]
-	[[Category: Markley, J]]	+	[[Category: Markley J]]
-	[[Category: Singarapu, K]]	+	[[Category: Singarapu K]]
-	~~[[Category: Cesg]]~~	+
-	~~[[Category: Chaperone]]~~	+
-	~~[[Category: PSI, Protein structure initiative~~]]	+

OCA at 10:11, 12 May 2021

OCA — Wed, 12 May 2021 10:11:56 GMT

←Older revision		Revision as of 10:11, 12 May 2021
Line 1:		Line 1:

	==NMR structure of Hsp12 in the presence of DPC==		==NMR structure of Hsp12 in the presence of DPC==
-	<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2ljl' size='340' side='right'caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2LJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [~~http~~://pdbe.org/2ljl PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [https://pdbe.org/2ljl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [https://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/HSP12_YEAST HSP12_YEAST]] May play a role in a switch from carbohydrate utilizing metabolism to fatty acid utilizing metabolism.	+	[[https://www.uniprot.org/uniprot/HSP12_YEAST HSP12_YEAST]] May play a role in a switch from carbohydrate utilizing metabolism to fatty acid utilizing metabolism.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Heat Shock ~~Proteins~~\|Heat Shock ~~Proteins]]~~	+	*[[Heat Shock Protein structures\|Heat Shock Protein structures]]
-	*[[Intrinsically Disordered Protein\|Intrinsically Disordered Protein]]	+
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Baker's yeast]]		[[Category: Baker's yeast]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Markley, J]]		[[Category: Markley, J]]

OCA at 19:35, 1 August 2018

OCA — Wed, 01 Aug 2018 19:35:19 GMT

←Older revision		Revision as of 19:35, 1 August 2018
Line 1:		Line 1:
		+
	==NMR structure of Hsp12 in the presence of DPC==		==NMR structure of Hsp12 in the presence of DPC==
	<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://pdbe.org/2ljl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://pdbe.org/2ljl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ljl ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 20:		Line 21:
	==See Also==		==See Also==
	*[[Heat Shock Proteins\|Heat Shock Proteins]]		*[[Heat Shock Proteins\|Heat Shock Proteins]]
		+	*[[Intrinsically Disordered Protein\|Intrinsically Disordered Protein]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 14:10, 10 September 2015

OCA — Thu, 10 Sep 2015 14:10:03 GMT

←Older revision		Revision as of 14:10, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 ~~Saccharomyces cerevisiae S288c~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://pdbe.org/2ljl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/HSP12_YEAST HSP12_YEAST]] May play a role in a switch from carbohydrate utilizing metabolism to fatty acid utilizing metabolism.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 14:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2ljl" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 21:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Saccharomyces cerevisiae s288c~~]]	+	[[Category: Baker's yeast]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Markley, J]]		[[Category: Markley, J]]

OCA at 15:18, 19 January 2015

OCA — Mon, 19 Jan 2015 15:18:30 GMT

←Older revision		Revision as of 15:18, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Saccharomyces cerevisiae s288c]]		[[Category: Saccharomyces cerevisiae s288c]]
-	[[Category: ~~CESG, Center for Eukaryotic~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Markley, J.]]	+	[[Category: Markley, J]]
-	[[Category: Singarapu, K~~.]]~~	+	[[Category: Singarapu, K]]
-	~~[[Category: Center for eukaryotic structural genomic~~]]	+
	[[Category: Cesg]]		[[Category: Cesg]]
	[[Category: Chaperone]]		[[Category: Chaperone]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA at 05:06, 29 September 2014

OCA — Mon, 29 Sep 2014 05:06:18 GMT

←Older revision		Revision as of 05:06, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2ljl.~~png~~\|~~left\|200px~~]]	+	==NMR structure of Hsp12 in the presence of DPC==
		+	<StructureSection load='2ljl' size='340' side='right' caption='[[2ljl]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LJL FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HSP12, GLP1, HOR5, YFL014W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ljl RCSB], [http://www.ebi.ac.uk/pdbsum/2ljl PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Hsp12 (heat shock protein 12) belongs to the small heat shock protein family, partially characterized as a stress response, stationary phase entry, late embryonic abundant-like protein located at the plasma membrane to protect membrane from desiccation. Here, we report the structural characterization of Hsp12 by NMR and biophysical techniques. The protein was labeled uniformly with nitrogen-15 and carbon-13 so that its conformation could be determined in detail both in aqueous solution and in two membrane-mimetic environments, SDS and dodecylphosphocholine (DPC) micelles. Secondary structural elements determined from assigned chemical shifts indicated that Hsp12 is dynamically disordered in aqueous solution, whereas it gains four helical stretches in the presence of SDS micelles and a single helix in presence of DPC. These conclusions were reinforced by circular dichroism spectra of the protein in all three environments. The lack of long range interactions in NOESY spectra indicated that the helices present in SDS micelles do not pack together. R(1) and R(2), relaxation and heteronuclear NOE measurements showed that the protein is disordered in aqueous solution but becomes more ordered in presence of detergent micelles. NMR spectra collected in presence of paramagnetic spin relaxation agents (5DSA, 16DSA, and Gd(DTPA-BMA)) indicated that the amphipathic alpha-helices of Hsp12 in SDS micelles lie on the membrane surface. These observations are in agreement with studies suggesting that Hsp12 functions to protect the membrane from desiccation.

-	~~{{STRUCTURE_2ljl\| PDB=2ljl \| SCENE= }}~~	+	Structural characterization of Hsp12, the heat shock protein from Saccharomyces cerevisiae, in aqueous solution where it is intrinsically disordered and in detergent micelles where it is locally alpha-helical.,Singarapu KK, Tonelli M, Chow DC, Frederick RO, Westler WM, Markley JL J Biol Chem. 2011 Dec 16;286(50):43447-53. Epub 2011 Oct 13. PMID:21998307<ref>PMID:21998307</ref>

-	~~===NMR structure~~ of ~~Hsp12 in~~ the ~~presence of DPC===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_21998307}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2ljl]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].~~	+

	==See Also==		==See Also==
	*[[Heat Shock Proteins\|Heat Shock Proteins]]		*[[Heat Shock Proteins\|Heat Shock Proteins]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Saccharomyces cerevisiae s288c]]		[[Category: Saccharomyces cerevisiae s288c]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]

OCA at 11:02, 20 October 2012

OCA — Sat, 20 Oct 2012 11:02:25 GMT

←Older revision		Revision as of 11:02, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2ljl]] is a 1 chain structure of [~~[Heat Shock Proteins]~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].	+	[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].

	==See Also==		==See Also==
	*[[Heat Shock Proteins\|Heat Shock Proteins]]		*[[Heat Shock Proteins\|Heat Shock Proteins]]
		+	[[Category: Saccharomyces cerevisiae s288c]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
	[[Category: Markley, J.]]		[[Category: Markley, J.]]

OCA at 06:23, 10 October 2012

OCA — Wed, 10 Oct 2012 06:23:08 GMT

←Older revision		Revision as of 06:23, 10 October 2012
Line 5:		Line 5:
	===NMR structure of Hsp12 in the presence of DPC===		===NMR structure of Hsp12 in the presence of DPC===

		+	{{ABSTRACT_PUBMED_21998307}}

	==About this Structure==		==About this Structure==
-	[[2ljl]] is a 1 chain structure of [[Heat Shock Proteins]~~] with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].	+	[[2ljl]] is a 1 chain structure of [[Heat Shock Proteins]]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].

	==See Also==		==See Also==
	*[[Heat Shock Proteins\|Heat Shock Proteins]]		*[[Heat Shock Proteins\|Heat Shock Proteins]]
-	[[Category: Saccharomyces cerevisiae]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
	[[Category: Markley, J.]]		[[Category: Markley, J.]]

OCA at 04:02, 26 July 2012

OCA — Thu, 26 Jul 2012 04:02:58 GMT

←Older revision		Revision as of 04:02, 26 July 2012
Line 1:		Line 1:
	[[Image:2ljl.png\|left\|200px]]		[[Image:2ljl.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2ljl", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2ljl\| PDB=2ljl \| SCENE= }}		{{STRUCTURE_2ljl\| PDB=2ljl \| SCENE= }}

Line 13:		Line 7:

	==About this Structure==		==About this Structure==
-	[[2ljl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].	+	[[2ljl]] is a 1 chain structure of [[Heat Shock Proteins]] with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJL OCA].
		+
		+	==See Also==
		+	*[[Heat Shock Proteins\|Heat Shock Proteins]]
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]