2ntz - Revision history

OCA at 10:20, 30 August 2023

OCA — Wed, 30 Aug 2023 10:20:46 GMT

←Older revision		Revision as of 10:20, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2ntz' size='340' side='right'caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>		<StructureSection load='2ntz' size='340' side='right'caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bpp1 Bpp1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P1 Escherichia virus P1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.35Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[1zx4\|1zx4]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~parb ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [https://pdbe.org/2ntz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [https://www.ebi.ac.uk/pdbsum/2ntz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntz ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [https://pdbe.org/2ntz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [https://www.ebi.ac.uk/pdbsum/2ntz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntz ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q38420_BPP1Z Q38420_BPP1Z]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bpp1~~]]	+	[[Category: Escherichia virus P1]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Funnell~~, B E~~]]	+	[[Category: Funnell BE]]
-	[[Category: Mansoor, A]]	+	[[Category: Mansoor A]]
-	[[Category: Schumacher~~, M A]]~~	+	[[Category: Schumacher MA]]
-	~~[[Category: Cell cycle-dna complex]]~~	+
-	~~[[Category: Para]]~~	+
-	~~[[Category: Parb]]~~	+
-	~~[[Category: Partition]]~~	+
-	~~[[Category: Segregation~~]]	+

OCA at 15:51, 8 June 2021

OCA — Tue, 08 Jun 2021 15:51:06 GMT

←Older revision		Revision as of 15:51, 8 June 2021
Line 1:		Line 1:

	==Structure of a ParB-DNA complex reveals a double B-box interaction==		==Structure of a ParB-DNA complex reveals a double B-box interaction==
-	<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>	+	<StructureSection load='2ntz' size='340' side='right'caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bpp1 Bpp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpp1 Bpp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1zx4\|1zx4]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [~~http~~://pdbe.org/2ntz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ntz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [https://pdbe.org/2ntz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [https://www.ebi.ac.uk/pdbsum/2ntz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</StructureSection>		</StructureSection>
	[[Category: Bpp1]]		[[Category: Bpp1]]
		+	[[Category: Large Structures]]
	[[Category: Funnell, B E]]		[[Category: Funnell, B E]]
	[[Category: Mansoor, A]]		[[Category: Mansoor, A]]

OCA at 17:30, 15 August 2018

OCA — Wed, 15 Aug 2018 17:30:22 GMT

←Older revision		Revision as of 17:30, 15 August 2018
Line 1:		Line 1:
		+
	==Structure of a ParB-DNA complex reveals a double B-box interaction==		==Structure of a ParB-DNA complex reveals a double B-box interaction==
	<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>		<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://pdbe.org/2ntz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://pdbe.org/2ntz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ntz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nt/2ntz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nt/2ntz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 03:17, 8 February 2016

OCA — Mon, 08 Feb 2016 03:17:44 GMT

←Older revision		Revision as of 03:17, 8 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ntz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 07:21, 10 September 2015

OCA — Thu, 10 Sep 2015 07:21:42 GMT

←Older revision		Revision as of 07:21, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>		<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Enterobacteria_phage_p1 Enterobacteria phage p1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpp1 Bpp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 ~~Enterobacteria phage P1~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 BPP1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://pdbe.org/2ntz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2ntz" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Enterobacteria phage p1~~]]	+	[[Category: Bpp1]]
	[[Category: Funnell, B E]]		[[Category: Funnell, B E]]
	[[Category: Mansoor, A]]		[[Category: Mansoor, A]]

OCA at 14:22, 19 January 2015

OCA — Mon, 19 Jan 2015 14:22:41 GMT

←Older revision		Revision as of 14:22, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 Enterobacteria phage P1])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 Enterobacteria phage P1])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 31:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Enterobacteria phage p1]]		[[Category: Enterobacteria phage p1]]
-	[[Category: Funnell, B E.]]	+	[[Category: Funnell, B E]]
-	[[Category: Mansoor, A.]]	+	[[Category: Mansoor, A]]
-	[[Category: Schumacher, M A.]]	+	[[Category: Schumacher, M A]]
	[[Category: Cell cycle-dna complex]]		[[Category: Cell cycle-dna complex]]
	[[Category: Para]]		[[Category: Para]]

OCA at 18:28, 30 September 2014

OCA — Tue, 30 Sep 2014 18:28:06 GMT

←Older revision		Revision as of 18:28, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2ntz.~~png~~\|~~left~~\|200px]]	+	==Structure of a ParB-DNA complex reveals a double B-box interaction==
		+	<StructureSection load='2ntz' size='340' side='right' caption='[[2ntz]], [[Resolution\|resolution]] 3.35Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2NTZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zx4\|1zx4]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">parb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10678 Enterobacteria phage P1])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ntz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ntz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ntz RCSB], [http://www.ebi.ac.uk/pdbsum/2ntz PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nt/2ntz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The plasmid partition process is essential for plasmid propagation and is mediated by par systems, consisting of centromere-like sites and two proteins, ParA and ParB. In the first step of partition by the archetypical P1 system, ParB binds a complicated centromere-like site to form a large nucleoprotein segrosome. ParB is a dimeric DNA-binding protein that can bridge between both A-boxes and B-boxes located on the centromere. Its helix-turn-helix domains bind A-boxes and the dimer domain binds B-boxes. Binding of the first ParB dimer nucleates the remaining ParB molecules onto the centromere site, which somehow leads to the formation of a condensed segrosome superstructure. To further understand this unique DNA spreading capability of ParB, we crystallized and determined the structure of a 1:2 ParB-(142-333):A3-B2-box complex to 3.35A resolution. The structure reveals a remarkable four-way, protein-DNA bridged complex in which both ParB helix-turn-helix domains simultaneously bind adjacent A-boxes and the dimer domain bridges between two B-boxes. The multibridging capability and the novel dimer domain-B-box interaction, which juxtaposes the DNA sites close in space, suggests a mechanism for the formation of the wrapped solenoid-like segrosome superstructure. This multibridging capability of ParB is likely critical in its partition complex formation and pairing functions.

-	~~{{STRUCTURE_2ntz\| PDB=2ntz \| SCENE= }}~~	+	Structure of a four-way bridged ParB-DNA complex provides insight into P1 segrosome assembly.,Schumacher MA, Mansoor A, Funnell BE J Biol Chem. 2007 Apr 6;282(14):10456-64. Epub 2007 Feb 9. PMID:17293348<ref>PMID:17293348</ref>

-	~~===Structure~~ of ~~a ParB-DNA complex reveals a double B-box interaction===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17293348}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2ntz]] is a 6 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:017293348<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Enterobacteria phage p1]]		[[Category: Enterobacteria phage p1]]
	[[Category: Funnell, B E.]]		[[Category: Funnell, B E.]]

OCA: Protected "2ntz" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 13:20:02 GMT

Protected "2ntz" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:20, 7 January 2013

OCA at 13:20, 7 January 2013

OCA — Mon, 07 Jan 2013 13:20:00 GMT

←Older revision		Revision as of 13:20, 7 January 2013
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-	{{Seed}}
	[[Image:2ntz.png\|left\|200px]]		[[Image:2ntz.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2ntz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2ntz\| PDB=2ntz \| SCENE= }}		{{STRUCTURE_2ntz\| PDB=2ntz \| SCENE= }}

	===Structure of a ParB-DNA complex reveals a double B-box interaction===		===Structure of a ParB-DNA complex reveals a double B-box interaction===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17293348}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17293348 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_17293348}}		{{ABSTRACT_PUBMED_17293348}}

	==About this Structure==		==About this Structure==
-	~~2NTZ~~ is a 6 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA].	+	[[2ntz]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17293348~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017293348</ref><references group="xtra"/>
	[[Category: Enterobacteria phage p1]]		[[Category: Enterobacteria phage p1]]
	[[Category: Funnell, B E.]]		[[Category: Funnell, B E.]]
	[[Category: Mansoor, A.]]		[[Category: Mansoor, A.]]
	[[Category: Schumacher, M A.]]		[[Category: Schumacher, M A.]]
-	[[Category: Cell cycle/dna complex]]	+	[[Category: Cell cycle-dna complex]]
	[[Category: Para]]		[[Category: Para]]
	[[Category: Parb]]		[[Category: Parb]]
	[[Category: Partition]]		[[Category: Partition]]
	[[Category: Segregation]]		[[Category: Segregation]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 18:25:04 2009''

OCA at 16:25, 16 February 2009

OCA — Mon, 16 Feb 2009 16:25:06 GMT

←Older revision		Revision as of 16:25, 16 February 2009
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	==About this Structure==		==About this Structure==
-	2NTZ is a ~~[[Protein complex]]~~ structure of sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA].	+	2NTZ is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p1 Enterobacteria phage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NTZ OCA].

	==Reference==		==Reference==
-	~~Structure of a four-way bridged ParB-DNA complex provides insight into P1 segrosome assembly., Schumacher MA, Mansoor A, Funnell BE, J Biol Chem. 2007 Apr 6;282(14):10456-64. Epub 2007 Feb 9.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/17293348 17293348]~~	+	<ref group="xtra">PMID:17293348</ref><references group="xtra"/>
	[[Category: Enterobacteria phage p1]]		[[Category: Enterobacteria phage p1]]
-	[[Category: ~~Protein complex~~]]	+	[[Category: Funnell, B E.]]
-	[[Category: ~~Pdbx_ordinal=~~, ~~<PDBx~~:~~audit_author~~.]]	+	[[Category: Mansoor, A.]]
		+	[[Category: Schumacher, M A.]]
	[[Category: Cell cycle/dna complex]]		[[Category: Cell cycle/dna complex]]
	[[Category: Para]]		[[Category: Para]]
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	[[Category: Segregation]]		[[Category: Segregation]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Dec 10 20~~:27:~~49 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 18:25:04 2009''