2o3g - Revision history

OCA at 00:13, 28 December 2023

OCA — Thu, 28 Dec 2023 00:13:56 GMT

←Older revision		Revision as of 00:13, 28 December 2023
Line 3:		Line 3:
	<StructureSection load='2o3g' size='340' side='right'caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>		<StructureSection load='2o3g' size='340' side='right'caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Neimb Neimb~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3G FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=EDO:1~~,2~~-ETHANEDIOL'>EDO</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.55Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">NMB1485 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [https://pdbe.org/2o3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [https://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [https://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [https://pdbe.org/2o3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [https://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [https://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9JYP7_NEIMB Q9JYP7_NEIMB]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Neimb~~]]	+	[[Category: Neisseria meningitidis MC58]]
-	[[Category: Gu, M]]	+	[[Category: Gu M]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Tan K]]
-	[[Category: Tan, K]]	+	[[Category: Volkart L]]
-	[[Category: Volkart, L]]	+
-	~~[[Category: Apc85631 1]]~~	+
-	~~[[Category: Conserved putative protein]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Neisseria meningitidis mc58]]~~	+
-	~~[[Category: PSI, Protein structure initiative~~]]	+

OCA at 15:59, 8 June 2021

OCA — Tue, 08 Jun 2021 15:59:37 GMT

←Older revision		Revision as of 15:59, 8 June 2021
Line 1:		Line 1:

	==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58==		==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58==
-	<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>	+	<StructureSection load='2o3g' size='340' side='right'caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Neimb Neimb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2O3G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neimb Neimb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O3G FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [~~http~~://pdbe.org/2o3g PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [https://pdbe.org/2o3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [https://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [https://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Neimb]]		[[Category: Neimb]]
	[[Category: Gu, M]]		[[Category: Gu, M]]

OCA at 07:22, 22 August 2018

OCA — Wed, 22 Aug 2018 07:22:09 GMT

←Older revision		Revision as of 07:22, 22 August 2018
Line 1:		Line 1:
		+
	==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58==		==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58==
	<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>		<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://pdbe.org/2o3g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://pdbe.org/2o3g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2o3g ProSAT], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3g_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3g_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o3g ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 11:37, 11 September 2015

OCA — Fri, 11 Sep 2015 11:37:01 GMT

←Older revision		Revision as of 11:37, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>		<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Neisseria_meningitidis Neisseria meningitidis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O3G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neimb Neimb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O3G FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~487 Neisseria meningitidis~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122586 NEIMB])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://pdbe.org/2o3g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Neisseria meningitidis~~]]	+	[[Category: Neimb]]
	[[Category: Gu, M]]		[[Category: Gu, M]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 15:50, 19 January 2015

OCA — Mon, 19 Jan 2015 15:50:30 GMT

←Older revision		Revision as of 15:50, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O3G FirstGlance]. <br>		<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O3G FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 Neisseria meningitidis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 Neisseria meningitidis])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Neisseria meningitidis]]		[[Category: Neisseria meningitidis]]
-	[[Category: Gu, M.]]	+	[[Category: Gu, M]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Tan, K.]]	+	[[Category: Tan, K]]
-	[[Category: Volkart, L.]]	+	[[Category: Volkart, L]]
	[[Category: Apc85631 1]]		[[Category: Apc85631 1]]
	[[Category: Conserved putative protein]]		[[Category: Conserved putative protein]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
-	[[Category: Midwest center for structural genomic]]
	[[Category: Neisseria meningitidis mc58]]		[[Category: Neisseria meningitidis mc58]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA at 18:58, 30 September 2014

OCA — Tue, 30 Sep 2014 18:58:46 GMT

←Older revision		Revision as of 18:58, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2o3g.png\|left\|200px]]~~	+	==Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58==
-		+	<StructureSection load='2o3g' size='340' side='right' caption='[[2o3g]], [[Resolution\|resolution]] 2.55Å' scene=''>
-	~~{{STRUCTURE_2o3g\| PDB=2o3g \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O3G FirstGlance]. <br>
-	===Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NMB1485 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 Neisseria meningitidis])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o3g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2o3g RCSB], [http://www.ebi.ac.uk/pdbsum/2o3g PDBsum], [http://www.topsan.org/Proteins/MCSG/2o3g TOPSAN]</span></td></tr>
-	[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o3/2o3g_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Neisseria meningitidis]]		[[Category: Neisseria meningitidis]]
	[[Category: Gu, M.]]		[[Category: Gu, M.]]

OCA: Protected "2o3g" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 11:17:37 GMT

Protected "2o3g" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:17, 7 January 2013

OCA at 11:17, 7 January 2013

OCA — Mon, 07 Jan 2013 11:17:35 GMT

←Older revision		Revision as of 11:17, 7 January 2013
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-	{{Seed}}
	[[Image:2o3g.png\|left\|200px]]		[[Image:2o3g.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2o3g", creates the "Structure Box" on the page.
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	{{STRUCTURE_2o3g\| PDB=2o3g \| SCENE= }}		{{STRUCTURE_2o3g\| PDB=2o3g \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2O3G~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Neisseria_meningitidis_serogroup_b~~ Neisseria meningitidis ~~serogroup b~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA].	+	[[2o3g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA].
-	[[Category: Neisseria meningitidis ~~serogroup b~~]]	+	[[Category: Neisseria meningitidis]]
	[[Category: Gu, M.]]		[[Category: Gu, M.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Conserved putative protein]]		[[Category: Conserved putative protein]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
		+	[[Category: Membrane protein]]
	[[Category: Midwest center for structural genomic]]		[[Category: Midwest center for structural genomic]]
	[[Category: Neisseria meningitidis mc58]]		[[Category: Neisseria meningitidis mc58]]
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	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:40:10 2008''

OCA at 09:40, 16 November 2008

OCA — Sun, 16 Nov 2008 09:40:11 GMT

←Older revision		Revision as of 09:40, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2O3G is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_b Neisseria meningitidis serogroup b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA].	+	2O3G is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_serogroup_b Neisseria meningitidis serogroup b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O3G OCA].
	[[Category: Neisseria meningitidis serogroup b]]		[[Category: Neisseria meningitidis serogroup b]]
-	[[Category: Single protein]]
	[[Category: Gu, M.]]		[[Category: Gu, M.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 17~~:50:34 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:40:10 2008''

OCA at 14:50, 28 September 2008

OCA — Sun, 28 Sep 2008 14:50:37 GMT

←Older revision		Revision as of 14:50, 28 September 2008
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-	[[Image:2o3g.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2o3g.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2o3g\| PDB=2o3g \| SCENE= }}		{{STRUCTURE_2o3g\| PDB=2o3g \| SCENE= }}

-	~~'''~~Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58~~'''~~	+	===Structural Genomics, the crystal structure of a conserved putative domain from Neisseria meningitidis MC58===


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	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~May 4 10~~:16:49 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 17:50:34 2008''