2p68 - Revision history

OCA at 10:55, 30 August 2023

OCA — Wed, 30 Aug 2023 10:55:21 GMT

←Older revision		Revision as of 10:55, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2p68' size='340' side='right'caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>		<StructureSection load='2p68' size='340' side='right'caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Aquae Aquae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P68 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P68 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>fabG, aq_1716 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id~~=224324 AQUAE])</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.84Å</td></tr>
-	~~<tr id='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-oxoacyl~~-[~~acyl-carrier-protein]_reductase 3-oxoacyl-~~[~~acyl-carrier-protein~~] ~~reductase~~]~~, with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=~~1.~~1.1.100 1.1.1.100] </span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [https://pdbe.org/2p68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [https://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p68 ProSAT], [https://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [https://pdbe.org/2p68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [https://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p68 ProSAT], [https://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/FABG_AQUAE FABG_AQUAE]] Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis (By similarity).	+	[https://www.uniprot.org/uniprot/FABG_AQUAE FABG_AQUAE] Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aquae~~]]	+	[[Category: Aquifex aeolicus VF5]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen, L]]	+	[[Category: Chen L]]
-	[[Category: Chen, L Q]]	+	[[Category: Chen L-Q]]
-	[[Category: Dillard, B]]	+	[[Category: Dillard B]]
-	[[Category: Ebihara, A]]	+	[[Category: Ebihara A]]
-	[[Category: Kuramitsu, S]]	+	[[Category: Kuramitsu S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Rose JP]]
-	[[Category: Rose~~, J P~~]]	+	[[Category: Shinkai A]]
-	[[Category: Shinkai, A]]	+	[[Category: Wang B-C]]
-	[[Category: Wang, B C]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+	[[Category: Zhao M]]
-	[[Category: Zhao, M]]	+
-	~~[[Category: 3-ketoacyl-acyl carrier protein reductase]]~~	+
-	~~[[Category: Aq_1716]]~~	+
-	~~[[Category: Aquifex aeolicus vf5]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Secsg~~]]	+

OCA at 15:17, 17 June 2021

OCA — Thu, 17 Jun 2021 15:17:13 GMT

←Older revision		Revision as of 15:17, 17 June 2021
Line 1:		Line 1:

	==Crystal Structure of aq_1716 from Aquifex Aeolicus VF5==		==Crystal Structure of aq_1716 from Aquifex Aeolicus VF5==
-	<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>	+	<StructureSection load='2p68' size='340' side='right'caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2P68 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P68 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [~~http~~://pdbe.org/2p68 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2p68 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [https://pdbe.org/2p68 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [https://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p68 ProSAT], [https://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/FABG_AQUAE FABG_AQUAE]] Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis (By similarity).	+	[[https://www.uniprot.org/uniprot/FABG_AQUAE FABG_AQUAE]] Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p68 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p68 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Beta-ketoacyl carrier protein reductase 3D structures\|Beta-ketoacyl carrier protein reductase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Aquae]]		[[Category: Aquae]]
		+	[[Category: Large Structures]]
	[[Category: Chen, L]]		[[Category: Chen, L]]
	[[Category: Chen, L Q]]		[[Category: Chen, L Q]]

OCA at 18:57, 24 January 2018

OCA — Wed, 24 Jan 2018 18:57:25 GMT

←Older revision		Revision as of 18:57, 24 January 2018
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p68_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p68_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Aquae]]		[[Category: Aquae]]
-	[[Category: Chen, L-Q]]
	[[Category: Chen, L]]		[[Category: Chen, L]]
		+	[[Category: Chen, L Q]]
	[[Category: Dillard, B]]		[[Category: Dillard, B]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]
Line 31:		Line 31:
	[[Category: Rose, J P]]		[[Category: Rose, J P]]
	[[Category: Shinkai, A]]		[[Category: Shinkai, A]]
-	[[Category: Wang, B-C]]	+	[[Category: Wang, B C]]
	[[Category: Yokoyama, S]]		[[Category: Yokoyama, S]]
	[[Category: Zhao, M]]		[[Category: Zhao, M]]

OCA at 09:19, 18 October 2017

OCA — Wed, 18 Oct 2017 09:19:12 GMT

←Older revision		Revision as of 09:19, 18 October 2017
Line 1:		Line 1:
		+
	==Crystal Structure of aq_1716 from Aquifex Aeolicus VF5==		==Crystal Structure of aq_1716 from Aquifex Aeolicus VF5==
	<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>		<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://pdbe.org/2p68 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://pdbe.org/2p68 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2p68 ProSAT], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p68 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p68 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[Beta-ketoacyl-ACP reductase\|Beta-ketoacyl-ACP reductase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:31, 7 February 2016

OCA — Sun, 07 Feb 2016 16:31:01 GMT

←Older revision		Revision as of 16:31, 7 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p68 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 03:15, 10 September 2015

OCA — Thu, 10 Sep 2015 03:15:33 GMT

←Older revision		Revision as of 03:15, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>		<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aquifex_aeolicus Aquifex aeolicus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P68 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P68 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~63363 Aquifex aeolicus~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://pdbe.org/2p68 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aquifex aeolicus~~]]	+	[[Category: Aquae]]
	[[Category: Chen, L-Q]]		[[Category: Chen, L-Q]]
	[[Category: Chen, L]]		[[Category: Chen, L]]

OCA at 16:42, 24 December 2014

OCA — Wed, 24 Dec 2014 16:42:58 GMT

←Older revision		Revision as of 16:42, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P68 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P68 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/FABG_AQUAE FABG_AQUAE]] Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
-	[[Category: Chen, L-Q.]]	+	[[Category: Chen, L-Q]]
-	[[Category: Chen, L.]]	+	[[Category: Chen, L]]
-	[[Category: Dillard, B.]]	+	[[Category: Dillard, B]]
-	[[Category: Ebihara, A.]]	+	[[Category: Ebihara, A]]
-	[[Category: Kuramitsu, S.]]	+	[[Category: Kuramitsu, S]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Rose, J P~~.]]~~	+	[[Category: Rose, J P]]
-	~~[[Category: SECSG, Southeast Collaboratory for Structural Genomics.~~]]	+	[[Category: Shinkai, A]]
-	[[Category: Shinkai, A.]]	+	[[Category: Wang, B-C]]
-	[[Category: Wang, B-C.]]	+	[[Category: Yokoyama, S]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Zhao, M]]
-	[[Category: Zhao, M.]]	+
	[[Category: 3-ketoacyl-acyl carrier protein reductase]]		[[Category: 3-ketoacyl-acyl carrier protein reductase]]
	[[Category: Aq_1716]]		[[Category: Aq_1716]]
Line 41:		Line 42:
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Protein structure ~~initiative]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Riken structural genomics/proteomics~~ initiative]]	+
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Secsg]]		[[Category: Secsg]]
-	[[Category: Southeast collaboratory for structural genomic]]
-	[[Category: Structural genomic]]

OCA at 19:57, 30 September 2014

OCA — Tue, 30 Sep 2014 19:57:58 GMT

←Older revision		Revision as of 19:57, 30 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2p68.~~png\|left~~\|200px]]	+	==Crystal Structure of aq_1716 from Aquifex Aeolicus VF5==
		+	<StructureSection load='2p68' size='340' side='right' caption='[[2p68]], [[Resolution\|resolution]] 1.84Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P68 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fabG, aq_1716 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-oxoacyl-[acyl-carrier-protein]_reductase 3-oxoacyl-[acyl-carrier-protein] reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.100 1.1.1.100] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p68 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p68 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p68 RCSB], [http://www.ebi.ac.uk/pdbsum/2p68 PDBsum], [http://www.topsan.org/Proteins/RSGI/2p68 TOPSAN]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p68_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_2p68\| PDB~~=~~2p68 \| SCENE= }}~~	+	==See Also==
-		+	*[[Beta-ketoacyl-ACP reductase\|Beta-ketoacyl-ACP reductase]]
-	~~===Crystal Structure of aq_1716 from Aquifex Aeolicus VF5~~===	+	__TOC__
-		+	</StructureSection>
-		+
-	~~==About this Structure==~~	+
-	[[~~2p68~~]] ~~is a 2 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA].~~	+
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Chen, L-Q.]]		[[Category: Chen, L-Q.]]

OCA: Protected "2p68" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 14:56:43 GMT

Protected "2p68" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:56, 7 January 2013

OCA at 14:56, 7 January 2013

OCA — Mon, 07 Jan 2013 14:56:40 GMT

←Older revision		Revision as of 14:56, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2p68.png\|left\|200px]]		[[Image:2p68.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2p68", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2p68\| PDB=2p68 \| SCENE= }}		{{STRUCTURE_2p68\| PDB=2p68 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2P68~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA].	+	[[2p68]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P68 OCA].
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
	[[Category: Chen, L-Q.]]		[[Category: Chen, L-Q.]]
Line 33:		Line 26:
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
		+	[[Category: Oxidoreductase]]
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
	[[Category: Psi]]		[[Category: Psi]]
Line 40:		Line 34:
	[[Category: Southeast collaboratory for structural genomic]]		[[Category: Southeast collaboratory for structural genomic]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:06:01 2008''