2peo - Revision history

OCA at 11:00, 30 August 2023

OCA — Wed, 30 Aug 2023 11:00:02 GMT

←Older revision		Revision as of 11:00, 30 August 2023
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	<StructureSection load='2peo' size='340' side='right'caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2peo' size='340' side='right'caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Anasc Anasc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PEO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_sp._CA_=_ATCC_33047 Anabaena sp. CA = ATCC 33047]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PEO FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">rbcX ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=~~5&~~id=52271 ANASC])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [https://pdbe.org/2peo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [https://www.ebi.ac.uk/pdbsum/2peo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2peo ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [https://pdbe.org/2peo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [https://www.ebi.ac.uk/pdbsum/2peo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2peo ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/RBCX_ANASC RBCX_ANASC] An RbcL-specific chaperone. The central cleft of the RbcX homodimer (RbcX2) binds the C-terminus of an RbcL monomer, stabilizing the C-terminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peripheral region of RbcX2 binds a second RbcL monomer, bridging the RbcL homodimers in the correct orientation. The RbcX2(2)-bound RbcL dimers then assemble into the RbcL8 core (RbcL8-(RbcX2)8). RbcS binding triggers the release of RbcX2 (PubMed:20075914, PubMed:21765418).[HAMAP-Rule:MF_00855]<ref>PMID:20075914</ref> <ref>PMID:21765418</ref> Required for optimal reconstitution of RuBisCO upon expression of rbcL-rbcS subunits in E.coli (PubMed:9171433).<ref>PMID:9171433</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Anasc~~]]	+	[[Category: Anabaena sp. CA = ATCC 33047]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bracher, A]]	+	[[Category: Bracher A]]
-	[[Category: Hartl~~, F U~~]]	+	[[Category: Hartl FU]]
-	[[Category: Hayer-Hartl, M]]	+	[[Category: Hayer-Hartl M]]
-	~~[[Category: Rao, B Vasudeva]]~~	+	[[Category: Saschenbrecker S]]
-	~~[[Category: Rao, K Vasudeva~~]]	+	[[Category: Vasudeva Rao B]]
-	[[Category: Saschenbrecker, S]]	+	[[Category: Vasudeva Rao K]]
-	[[Category: ~~Chaperone~~]]	+
-	[[Category: ~~Helix bundle]]~~	+
-	~~[[Category: Protein complex assembly~~]]	+

OCA at 15:22, 17 June 2021

OCA — Thu, 17 Jun 2021 15:22:21 GMT

←Older revision		Revision as of 15:22, 17 June 2021
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	==Crystal structure of RbcX from Anabaena CA==		==Crystal structure of RbcX from Anabaena CA==
-	<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='2peo' size='340' side='right'caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Anasc Anasc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2PEO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anasc Anasc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PEO FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ANASC])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ANASC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [~~http~~://pdbe.org/2peo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2peo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2peo ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [https://pdbe.org/2peo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [https://www.ebi.ac.uk/pdbsum/2peo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2peo ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pe/2peo_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pe/2peo_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Anasc]]		[[Category: Anasc]]
		+	[[Category: Large Structures]]
	[[Category: Bracher, A]]		[[Category: Bracher, A]]
	[[Category: Hartl, F U]]		[[Category: Hartl, F U]]

OCA at 09:24, 18 October 2017

OCA — Wed, 18 Oct 2017 09:24:03 GMT

←Older revision		Revision as of 09:24, 18 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of RbcX from Anabaena CA==		==Crystal structure of RbcX from Anabaena CA==
	<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ANASC])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ANASC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://pdbe.org/2peo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://pdbe.org/2peo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2peo ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 00:17, 10 February 2016

OCA — Wed, 10 Feb 2016 00:17:42 GMT

←Older revision		Revision as of 00:17, 10 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2peo ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 03:28, 11 September 2015

OCA — Fri, 11 Sep 2015 03:28:31 GMT

←Older revision		Revision as of 03:28, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Anabaena_sp._ca Anabaena sp. ca~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PEO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PEO FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ~~Anabaena sp. CA~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 ANASC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://pdbe.org/2peo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2peo" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Anabaena sp. ca~~]]	+	[[Category: Anasc]]
	[[Category: Bracher, A]]		[[Category: Bracher, A]]
	[[Category: Hartl, F U]]		[[Category: Hartl, F U]]

OCA at 16:58, 19 January 2015

OCA — Mon, 19 Jan 2015 16:58:11 GMT

←Older revision		Revision as of 16:58, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PEO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PEO FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 Anabaena sp. CA])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 Anabaena sp. CA])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 30:
	</StructureSection>		</StructureSection>
	[[Category: Anabaena sp. ca]]		[[Category: Anabaena sp. ca]]
-	[[Category: Bracher, A.]]	+	[[Category: Bracher, A]]
-	[[Category: Hartl, F U.]]	+	[[Category: Hartl, F U]]
-	[[Category: Hayer-Hartl, M.]]	+	[[Category: Hayer-Hartl, M]]
-	[[Category: Rao, B Vasudeva.]]	+	[[Category: Rao, B Vasudeva]]
-	[[Category: Rao, K Vasudeva.]]	+	[[Category: Rao, K Vasudeva]]
-	[[Category: Saschenbrecker, S.]]	+	[[Category: Saschenbrecker, S]]
	[[Category: Chaperone]]		[[Category: Chaperone]]
	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Protein complex assembly]]		[[Category: Protein complex assembly]]

OCA at 19:33, 30 September 2014

OCA — Tue, 30 Sep 2014 19:33:59 GMT

←Older revision		Revision as of 19:33, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2peo.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of RbcX from Anabaena CA==
		+	<StructureSection load='2peo' size='340' side='right' caption='[[2peo]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PEO FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2pei\|2pei]], [[2pej\|2pej]], [[2pek\|2pek]], [[2pem\|2pem]], [[2pen\|2pen]], [[2peq\|2peq]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rbcX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=52271 Anabaena sp. CA])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2peo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2peo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2peo RCSB], [http://www.ebi.ac.uk/pdbsum/2peo PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pe/2peo_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	After folding, many proteins must assemble into oligomeric complexes to become biologically active. Here we describe the role of RbcX as an assembly chaperone of ribulose-bisphosphate carboxylase/oxygenase (Rubisco), the enzyme responsible for the fixation of atmospheric carbon dioxide. In cyanobacteria and plants, Rubisco is an approximately 520 kDa complex composed of eight large subunits (RbcL) and eight small subunits (RbcS). We found that cyanobacterial RbcX functions downstream of chaperonin-mediated RbcL folding in promoting the formation of RbcL(8) core complexes. Structural analysis revealed that the 15 kDa RbcX forms a homodimer with two cooperating RbcL-binding regions. A central cleft specifically binds the exposed C-terminal peptide of RbcL subunits, enabling a peripheral surface of RbcX to mediate RbcL(8) assembly. Due to the dynamic nature of these interactions, RbcX is readily displaced from RbcL(8) complexes by RbcS, producing the active enzyme. The strategies employed by RbcX in achieving substrate specificity and efficient product release may be generally relevant in assisted assembly reactions.

-	~~{{STRUCTURE_2peo\| PDB=2peo \| SCENE= }}~~	+	Structure and function of RbcX, an assembly chaperone for hexadecameric Rubisco.,Saschenbrecker S, Bracher A, Rao KV, Rao BV, Hartl FU, Hayer-Hartl M Cell. 2007 Jun 15;129(6):1189-200. PMID:17574029<ref>PMID:17574029</ref>

-	~~===Crystal structure~~ of ~~RbcX from Anabaena CA===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17574029}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2peo]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Anabaena_sp~~.~~_ca Anabaena sp. ca]. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:017574029<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Anabaena sp. ca]]		[[Category: Anabaena sp. ca]]
	[[Category: Bracher, A.]]		[[Category: Bracher, A.]]

OCA: Protected "2peo" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 14:35:05 GMT

Protected "2peo" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:35, 7 January 2013

OCA at 14:35, 7 January 2013

OCA — Mon, 07 Jan 2013 14:35:03 GMT

←Older revision		Revision as of 14:35, 7 January 2013
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-	{{Seed}}
	[[Image:2peo.png\|left\|200px]]		[[Image:2peo.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2peo", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2peo\| PDB=2peo \| SCENE= }}		{{STRUCTURE_2peo\| PDB=2peo \| SCENE= }}

	===Crystal structure of RbcX from Anabaena CA===		===Crystal structure of RbcX from Anabaena CA===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17574029}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17574029 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_17574029}}		{{ABSTRACT_PUBMED_17574029}}

	==About this Structure==		==About this Structure==
-	~~2PEO~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA].	+	[[2peo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17574029~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017574029</ref><references group="xtra"/>
	[[Category: Anabaena sp. ca]]		[[Category: Anabaena sp. ca]]
	[[Category: Bracher, A.]]		[[Category: Bracher, A.]]
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	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Protein complex assembly]]		[[Category: Protein complex assembly]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:53:40 2009''

OCA at 11:53, 17 February 2009

OCA — Tue, 17 Feb 2009 11:53:41 GMT

←Older revision		Revision as of 11:53, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2PEO is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA].	+	2PEO is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEO OCA].

	==Reference==		==Reference==
-	~~Structure and function of RbcX, an assembly chaperone for hexadecameric Rubisco., Saschenbrecker S, Bracher A, Rao KV, Rao BV, Hartl FU, Hayer-Hartl M, Cell. 2007 Jun 15;129(6):1189-200.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/17574029 17574029]~~	+	<ref group="xtra">PMID:17574029</ref><references group="xtra"/>
	[[Category: Anabaena sp. ca]]		[[Category: Anabaena sp. ca]]
-	[[Category: Single protein]]
	[[Category: Bracher, A.]]		[[Category: Bracher, A.]]
	[[Category: Hartl, F U.]]		[[Category: Hartl, F U.]]
Line 36:		Line 35:
	[[Category: Protein complex assembly]]		[[Category: Protein complex assembly]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Jul 28 19~~:11:~~15 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:53:40 2009''