2pmx - Revision history

OCA: Redirecting to 3gft

OCA — Wed, 11 Mar 2009 09:13:59 GMT

Redirecting to 3gft

←Older revision		Revision as of 09:13, 11 March 2009
Line 1:		Line 1:
-	~~{{Seed}}~~	+	#REDIRECT [[3gft]] This PDB entry is obsolete and replaced by 3gft
-	[[~~Image:2pmx.png\|left\|200px~~]]	+
-		+
-	~~<!--~~	+
-	~~The line below this paragraph, containing "STRUCTURE_2pmx", creates the "Structure Box" on the page.~~	+
-	~~You may change the~~ PDB ~~parameter (which sets the PDB file loaded into the applet)~~	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page~~ is ~~loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	~~-->~~	+
-	~~{{STRUCTURE_2pmx\| PDB=2pmx \| SCENE= }}~~	+
-		+
-	~~===Human K-Ras in complex with a GTP analogue===~~	+
-		+
-		+
-	~~==About this Structure==~~	+
-	2PMX is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].	+
-	~~[[Category: Homo sapiens]]~~	+
-	~~[[Category: Arrowsmith, C H.]]~~	+
-	~~[[Category: Bochkarev, A.]]~~	+
-	~~[[Category: Edwards, A M.]]~~	+
-	~~[[Category: Park, H.]]~~	+
-	~~[[Category: SGC, Structural Genomics Consortium.]]~~	+
-	~~[[Category: Shen, L.]]~~	+
-	~~[[Category: Sundstrom, M.]]~~	+
-	~~[[Category: Tempel, W.]]~~	+
-	~~[[Category: Tong, Y.]]~~	+
-	~~[[Category: Weigelt, J.]]~~	+
-	~~[[Category: Cancer]]~~	+
-	~~[[Category: Gtp analogue]]~~	+
-	~~[[Category: Mutation]]~~	+
-	~~[[Category: Sgc]]~~	+
-	~~[[Category: Small gtpase]]~~	+
-	~~[[Category: Structural genomics consortium]]~~	+
-		+
-	~~''Page seeded~~ by ~~[http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:16:36 2009''~~	+

OCA at 19:16, 17 February 2009

OCA — Tue, 17 Feb 2009 19:16:37 GMT

←Older revision		Revision as of 19:16, 17 February 2009
Line 1:		Line 1:
-	[[Image:2pmx.~~gif~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2pmx.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_2pmx\| PDB=2pmx \| SCENE= }}		{{STRUCTURE_2pmx\| PDB=2pmx \| SCENE= }}

-	~~'''~~Human K-Ras in complex with a GTP analogue~~'''~~	+	===Human K-Ras in complex with a GTP analogue===


	==About this Structure==		==About this Structure==
-	2PMX is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].	+	2PMX is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Single protein]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]
	[[Category: Bochkarev, A.]]		[[Category: Bochkarev, A.]]
Line 32:		Line 32:
	[[Category: Small gtpase]]		[[Category: Small gtpase]]
	[[Category: Structural genomics consortium]]		[[Category: Structural genomics consortium]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun May 4 13~~:26:~~44 2008~~''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:16:36 2009''

OCA at 10:26, 4 May 2008

OCA — Sun, 04 May 2008 10:26:47 GMT

←Older revision		Revision as of 10:26, 4 May 2008
Line 1:		Line 1:
	[[Image:2pmx.gif\|left\|200px]]		[[Image:2pmx.gif\|left\|200px]]

-	~~{{Structure~~	+	<!--
-	~~\|PDB= 2pmx \|SIZE=350\|CAPTION= <scene name='initialview01'>2pmx</scene>~~, ~~resolution 2~~.~~270Å~~	+	The line below this paragraph, containing "STRUCTURE_2pmx", creates the "Structure Box" on the page.
-	~~\|SITE=~~	+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	~~\|LIGAND= <~~scene ~~name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>~~, ~~<scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~	+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	~~\|ACTIVITY=~~	+	or leave the SCENE parameter empty for the default display.
-	~~\|GENE= KRAS, KRAS2, RASK2 ([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])~~	+	-->
-	~~\|DOMAIN=~~	+	{{STRUCTURE_2pmx\| PDB=2pmx \| SCENE= }}
-	\|~~RELATEDENTRY~~=	+
-	\|~~RESOURCES~~=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmx OCA], [http://www.ebi.ac.uk/pdbsum/2pmx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pmx RCSB]</span>	+
-	}}	+

	'''Human K-Ras in complex with a GTP analogue'''		'''Human K-Ras in complex with a GTP analogue'''
Line 29:		Line 26:
	[[Category: Tong, Y.]]		[[Category: Tong, Y.]]
	[[Category: Weigelt, J.]]		[[Category: Weigelt, J.]]
-	[[Category: ~~cancer~~]]	+	[[Category: Cancer]]
-	[[Category: ~~gtp~~ analogue]]	+	[[Category: Gtp analogue]]
-	[[Category: ~~mutation~~]]	+	[[Category: Mutation]]
-	[[Category: ~~sgc~~]]	+	[[Category: Sgc]]
-	[[Category: ~~small~~ gtpase]]	+	[[Category: Small gtpase]]
-	[[Category: ~~structural~~ genomics consortium]]	+	[[Category: Structural genomics consortium]]
-		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 13:26:44 2008''
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Mar 31 04~~:38:09 2008''	+

OCA at 01:38, 31 March 2008

OCA — Mon, 31 Mar 2008 01:38:09 GMT

←Older revision		Revision as of 01:38, 31 March 2008
Line 4:		Line 4:
	\|PDB= 2pmx \|SIZE=350\|CAPTION= <scene name='initialview01'>2pmx</scene>, resolution 2.270Å		\|PDB= 2pmx \|SIZE=350\|CAPTION= <scene name='initialview01'>2pmx</scene>, resolution 2.270Å
	\|SITE=		\|SITE=
-	\|LIGAND= <scene name='pdbligand=MG:~~MAGNESIUM~~+~~ION~~'>MG</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene> ~~and~~ <scene name='pdbligand=~~CIT~~:~~CITRIC ACID~~'>~~CIT~~</scene>	+	\|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
	\|ACTIVITY=		\|ACTIVITY=
	\|GENE= KRAS, KRAS2, RASK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])		\|GENE= KRAS, KRAS2, RASK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
		+	\|DOMAIN=
		+	\|RELATEDENTRY=
		+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmx OCA], [http://www.ebi.ac.uk/pdbsum/2pmx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pmx RCSB]</span>
	}}		}}

	'''Human K-Ras in complex with a GTP analogue'''		'''Human K-Ras in complex with a GTP analogue'''

-
-	==Disease==
-	Known diseases associated with this structure: Bladder cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Breast cancer, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Costello syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Leukemia, acute myelogenous OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Lung cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Noonan syndrome 3 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Pancreatic carcinoma, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Stomach cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]]

	==About this Structure==		==About this Structure==
Line 29:		Line 29:
	[[Category: Tong, Y.]]		[[Category: Tong, Y.]]
	[[Category: Weigelt, J.]]		[[Category: Weigelt, J.]]
-	[[Category: CIT]]
-	[[Category: GNP]]
-	[[Category: MG]]
	[[Category: cancer]]		[[Category: cancer]]
	[[Category: gtp analogue]]		[[Category: gtp analogue]]
Line 39:		Line 36:
	[[Category: structural genomics consortium]]		[[Category: structural genomics consortium]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu~~ Mar ~~20 18~~:15:01 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:38:09 2008''

OCA at 16:15, 20 March 2008

OCA — Thu, 20 Mar 2008 16:15:03 GMT

←Older revision		Revision as of 16:15, 20 March 2008
Line 1:		Line 1:
-	[[Image:2pmx.gif\|left\|200px]]~~<br /><applet load~~="2pmx~~" size~~="350~~" color~~=~~"white" frame="true" align="right" spinBox~~=~~"true"~~	+	[[Image:2pmx.gif\|left\|200px]]
-	~~caption="~~2pmx, resolution 2.270Å" />	+
-	'''Human K-Ras in complex with a GTP analogue'''~~<br />~~	+	{{Structure
		+	\|PDB= 2pmx \|SIZE=350\|CAPTION= <scene name='initialview01'>2pmx</scene>, resolution 2.270Å
		+	\|SITE=
		+	\|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene> and <scene name='pdbligand=CIT:CITRIC ACID'>CIT</scene>
		+	\|ACTIVITY=
		+	\|GENE= KRAS, KRAS2, RASK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
		+	}}
		+
		+	'''Human K-Ras in complex with a GTP analogue'''
		+

	==Disease==		==Disease==
Line 7:		Line 16:

	==About this Structure==		==About this Structure==
-	2PMX is a [~~http://en.wikipedia.org/wiki/Single_protein~~ Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens~~] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=GNP:'>GNP</scene> and <scene name='pdbligand=CIT:'>CIT</scene> as [http://en.wikipedia.org/wiki/ligands ligands~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].	+	2PMX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Single protein]]		[[Category: Single protein]]
Line 25:		Line 34:
	[[Category: cancer]]		[[Category: cancer]]
	[[Category: gtp analogue]]		[[Category: gtp analogue]]
-	[[Category: ~~mutations~~]]	+	[[Category: mutation]]
	[[Category: sgc]]		[[Category: sgc]]
	[[Category: small gtpase]]		[[Category: small gtpase]]
	[[Category: structural genomics consortium]]		[[Category: structural genomics consortium]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu ~~Feb 21~~ 18:31:18 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:15:01 2008''

OCA at 16:31, 21 February 2008

OCA — Thu, 21 Feb 2008 16:31:25 GMT

←Older revision		Revision as of 16:31, 21 February 2008
Line 2:		Line 2:
	caption="2pmx, resolution 2.270Å" />		caption="2pmx, resolution 2.270Å" />
	'''Human K-Ras in complex with a GTP analogue'''<br />		'''Human K-Ras in complex with a GTP analogue'''<br />
		+
		+	==Disease==
		+	Known diseases associated with this structure: Bladder cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Breast cancer, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Costello syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Leukemia, acute myelogenous OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Lung cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Noonan syndrome 3 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Pancreatic carcinoma, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Stomach cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]]

	==About this Structure==		==About this Structure==
Line 7:		Line 10:
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Single protein]]		[[Category: Single protein]]
-	[[Category: Arrowsmith, C.H.]]	+	[[Category: Arrowsmith, C H.]]
	[[Category: Bochkarev, A.]]		[[Category: Bochkarev, A.]]
-	[[Category: Edwards, A.M.]]	+	[[Category: Edwards, A M.]]
	[[Category: Park, H.]]		[[Category: Park, H.]]
-	[[Category: SGC, Structural.Genomics.Consortium.]]	+	[[Category: SGC, Structural Genomics Consortium.]]
	[[Category: Shen, L.]]		[[Category: Shen, L.]]
	[[Category: Sundstrom, M.]]		[[Category: Sundstrom, M.]]
Line 27:		Line 30:
	[[Category: structural genomics consortium]]		[[Category: structural genomics consortium]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jan 23 15~~:13:12 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:31:18 2008''

OCA at 13:13, 23 January 2008

OCA — Wed, 23 Jan 2008 13:13:12 GMT

←Older revision		Revision as of 13:13, 23 January 2008
Line 1:		Line 1:
-	[[Image:2pmx.gif\|left\|200px]]<br />	+	[[Image:2pmx.gif\|left\|200px]]<br /><applet load="2pmx" size="350" color="white" frame="true" align="right" spinBox="true"
-	<applet load="2pmx" size="~~450~~" color="white" frame="true" align="right" spinBox="true"	+
	caption="2pmx, resolution 2.270Å" />		caption="2pmx, resolution 2.270Å" />
	'''Human K-Ras in complex with a GTP analogue'''<br />		'''Human K-Ras in complex with a GTP analogue'''<br />
-
-	==Disease==
-	Known diseases associated with this structure: Bladder cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Breast cancer, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Costello syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Leukemia, acute myelogenous OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Lung cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Noonan syndrome 3 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Pancreatic carcinoma, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Stomach cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]]

	==About this Structure==		==About this Structure==
-	2PMX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with MG, GNP and CIT as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://~~ispc~~.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].	+	2PMX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=GNP:'>GNP</scene> and <scene name='pdbligand=CIT:'>CIT</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Single protein]]		[[Category: Single protein]]
Line 31:		Line 27:
	[[Category: structural genomics consortium]]		[[Category: structural genomics consortium]]

-	''Page seeded by [http://~~ispc~~.weizmann.ac.il/oca OCA ] on ~~Mon Nov 12~~ 23:25:~~23 2007~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 15:13:12 2008''

OCA: New page: 200px
'''Human K-Ras in com...
OCA — Mon, 12 Nov 2007 21:18:55 GMT

New page: 200px<br /> <applet load="2pmx" size="450" color="white" frame="true" align="right" spinBox="true" caption="2pmx, resolution 2.270Å" /> '''Human K-Ras in com...

New page
[[Image:2pmx.gif|left|200px]]<br />
<applet load="2pmx" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2pmx, resolution 2.270Å" />
'''Human K-Ras in complex with a GTP analogue'''<br />

==Disease==
Known diseases associated with this structure: Bladder cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Breast cancer, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Costello syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Leukemia, acute myelogenous OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Lung cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Noonan syndrome 3 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Pancreatic carcinoma, somatic OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]], Stomach cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=190070 190070]]

==About this Structure==
2PMX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with MG, GNP and CIT as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2PMX OCA].
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Arrowsmith, C.H.]]
[[Category: Bochkarev, A.]]
[[Category: Edwards, A.M.]]
[[Category: Park, H.]]
[[Category: SGC, Structural.Genomics.Consortium.]]
[[Category: Shen, L.]]
[[Category: Sundstrom, M.]]
[[Category: Tempel, W.]]
[[Category: Tong, Y.]]
[[Category: Weigelt, J.]]
[[Category: CIT]]
[[Category: GNP]]
[[Category: MG]]
[[Category: cancer]]
[[Category: gtp analogue]]
[[Category: mutations]]
[[Category: sgc]]
[[Category: small gtpase]]
[[Category: structural genomics consortium]]

''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 23:25:23 2007''