2pxg - Revision history

OCA at 10:02, 14 June 2023

OCA — Wed, 14 Jun 2023 10:02:16 GMT

←Older revision		Revision as of 10:02, 14 June 2023
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	==NMR Solution Structure of OmlA==		==NMR Solution Structure of OmlA==
-	<StructureSection load='2pxg' size='340' side='right'caption='[[2pxg~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2pxg' size='340' side='right'caption='[[2pxg]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PXG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [https://pdbe.org/2pxg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [https://www.ebi.ac.uk/pdbsum/2pxg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pxg ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [https://pdbe.org/2pxg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [https://www.ebi.ac.uk/pdbsum/2pxg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pxg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/Q8PMB6_XANAC Q8PMB6_XANAC]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_00925]	+	[https://www.uniprot.org/uniprot/Q8PMB6_XANAC Q8PMB6_XANAC] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_00925]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Benedetti, C E~~]]	+	[[Category: Xanthomonas citri]]
-	[[Category: ~~Pertinhez, T A~~]]	+	[[Category: Benedetti CE]]
-	[[Category: ~~Sforca, M L~~]]	+	[[Category: Pertinhez TA]]
-	[[Category: ~~Spisni, A~~]]	+	[[Category: Sforca ML]]
-	[[Category: ~~Vanini, M M.T~~]]	+	[[Category: Spisni A]]
-	[[Category: ~~Membrane protein]]~~	+	[[Category: Vanini MMT]]
-	~~[[Category: Two layer alpha/beta plait]]~~	+
-	~~[[Category: Two layer sandwich architecture~~]]	+

OCA at 18:31, 20 October 2021

OCA — Wed, 20 Oct 2021 18:31:19 GMT

←Older revision		Revision as of 18:31, 20 October 2021
Line 3:		Line 3:
	<StructureSection load='2pxg' size='340' side='right'caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2pxg' size='340' side='right'caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2PXG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [~~http~~://pdbe.org/2pxg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2pxg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2pxg ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [https://pdbe.org/2pxg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [https://www.ebi.ac.uk/pdbsum/2pxg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pxg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/Q8PMB6_XANAC Q8PMB6_XANAC]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_00925]	+	[[https://www.uniprot.org/uniprot/Q8PMB6_XANAC Q8PMB6_XANAC]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_00925]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 08:35, 5 February 2020

OCA — Wed, 05 Feb 2020 08:35:14 GMT

←Older revision		Revision as of 08:35, 5 February 2020
Line 1:		Line 1:

	==NMR Solution Structure of OmlA==		==NMR Solution Structure of OmlA==
-	<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2pxg' size='340' side='right'caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
Line 31:		Line 31:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Benedetti, C E]]		[[Category: Benedetti, C E]]
	[[Category: Pertinhez, T A]]		[[Category: Pertinhez, T A]]

OCA at 08:13, 29 August 2018

OCA — Wed, 29 Aug 2018 08:13:38 GMT

←Older revision		Revision as of 08:13, 29 August 2018
Line 1:		Line 1:
		+
	==NMR Solution Structure of OmlA==		==NMR Solution Structure of OmlA==
	<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://pdbe.org/2pxg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://pdbe.org/2pxg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pxg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/px/2pxg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/px/2pxg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 07:06, 9 February 2016

OCA — Tue, 09 Feb 2016 07:06:42 GMT

←Older revision		Revision as of 07:06, 9 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pxg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 19:48, 10 September 2015

OCA — Thu, 10 Sep 2015 19:48:21 GMT

←Older revision		Revision as of 19:48, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]~~. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">smpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=346 Xanthomonas citri])</td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://pdbe.org/2pxg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 25:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2pxg" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Xanthomonas citri]]
	[[Category: Benedetti, C E]]		[[Category: Benedetti, C E]]
	[[Category: Pertinhez, T A]]		[[Category: Pertinhez, T A]]

OCA at 05:14, 25 December 2014

OCA — Thu, 25 Dec 2014 05:14:27 GMT

←Older revision		Revision as of 05:14, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">smpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=346 Xanthomonas citri])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">smpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=346 Xanthomonas citri])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q8PMB6_XANAC Q8PMB6_XANAC]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (By similarity).[HAMAP-Rule:MF_00925]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Xanthomonas citri]]		[[Category: Xanthomonas citri]]
-	[[Category: Benedetti, C E.]]	+	[[Category: Benedetti, C E]]
-	[[Category: Pertinhez, T A.]]	+	[[Category: Pertinhez, T A]]
-	[[Category: Sforca, M L.]]	+	[[Category: Sforca, M L]]
-	[[Category: Spisni, A.]]	+	[[Category: Spisni, A]]
-	[[Category: Vanini, M M.T.]]	+	[[Category: Vanini, M M.T]]
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
	[[Category: Two layer alpha/beta plait]]		[[Category: Two layer alpha/beta plait]]
	[[Category: Two layer sandwich architecture]]		[[Category: Two layer sandwich architecture]]

OCA at 18:33, 30 September 2014

OCA — Tue, 30 Sep 2014 18:33:03 GMT

←Older revision		Revision as of 18:33, 30 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2pxg.~~png\|left~~\|200px]]	+	==NMR Solution Structure of OmlA==
		+	<StructureSection load='2pxg' size='340' side='right' caption='[[2pxg]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2pxg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PXG FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">smpA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=346 Xanthomonas citri])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pxg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pxg RCSB], [http://www.ebi.ac.uk/pdbsum/2pxg PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/px/2pxg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The outer membrane lipoprotein A (OmlA) belongs to a family of bacterial small lipoproteins widely distributed across the beta and gamma proteobacteria. Although the role of numerous bacterial lipoproteins is known, the biological function of OmlA remains elusive. We found that in the citrus canker pathogen, Xanthomonas axonopodis pv. citri (X. citri), OmlA is coregulated with the ferric uptake regulator (Fur) and their expression is enhanced when X. citri is grown on citrus leaves, suggesting that these proteins are involved in plant-pathogen interaction. To gain insights into the function of OmlA, its conformational and dynamic features were determined by nuclear magnetic resonance. The protein has highly flexible N- and C- termini and a structurally well defined core composed of three beta-strands and two small alpha-helices, which pack against each other forming a two-layer alpha/beta scaffold. This protein fold resembles the domains of the beta-lactamase inhibitory protein BLIP, involved in protein-protein binding. In conclusion, the structure of OmlA does suggest that this protein may be implicated in protein-protein interactions required during X. citri infection. Proteins 2008. (c) 2008 Wiley-Liss, Inc.

-	~~{{STRUCTURE_2pxg\| PDB=2pxg \| SCENE= }}~~	+	The solution structure of the outer membrane lipoprotein OmlA from Xanthomonas axonopodis pv. citri reveals a protein fold implicated in protein-protein interaction.,Vanini MM, Spisni A, Sforca ML, Pertinhez TA, Benedetti CE Proteins. 2008 Jan 10;. PMID:18186471<ref>PMID:18186471</ref>

-	~~===NMR Solution Structure~~ of ~~OmlA===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18186471}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2pxg]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Xanthomonas_citri Xanthomonas citri]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:018186471<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Xanthomonas citri]]		[[Category: Xanthomonas citri]]
	[[Category: Benedetti, C E.]]		[[Category: Benedetti, C E.]]

OCA: Protected "2pxg" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 21:13:26 GMT

Protected "2pxg" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:13, 7 January 2013

OCA at 21:13, 7 January 2013

OCA — Mon, 07 Jan 2013 21:13:23 GMT

←Older revision		Revision as of 21:13, 7 January 2013
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-	{{Seed}}
	[[Image:2pxg.png\|left\|200px]]		[[Image:2pxg.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2pxg\| PDB=2pxg \| SCENE= }}		{{STRUCTURE_2pxg\| PDB=2pxg \| SCENE= }}

	===NMR Solution Structure of OmlA===		===NMR Solution Structure of OmlA===

-
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-	The line below this paragraph, {{ABSTRACT_PUBMED_18186471}}, adds the Publication Abstract to the page
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	{{ABSTRACT_PUBMED_18186471}}		{{ABSTRACT_PUBMED_18186471}}

	==About this Structure==		==About this Structure==
-	~~2PXG~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Xanthomonas_axonopodis_pv._citri~~ Xanthomonas ~~axonopodis pv.~~ citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA].	+	[[2pxg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PXG OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18186471~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018186471</ref><references group="xtra"/>
-	[[Category: Xanthomonas ~~axonopodis pv.~~ citri]]	+	[[Category: Xanthomonas citri]]
	[[Category: Benedetti, C E.]]		[[Category: Benedetti, C E.]]
	[[Category: Pertinhez, T A.]]		[[Category: Pertinhez, T A.]]
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	[[Category: Two layer alpha/beta plait]]		[[Category: Two layer alpha/beta plait]]
	[[Category: Two layer sandwich architecture]]		[[Category: Two layer sandwich architecture]]
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-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 07:48:46 2009''