2q2p - Revision history

OCA at 11:16, 30 August 2023

OCA — Wed, 30 Aug 2023 11:16:26 GMT

←Older revision		Revision as of 11:16, 30 August 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>		<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1b8e\|1b8e]]~~, [[~~2q2m~~\|~~2q2m~~]]~~</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.96Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [https://pdbe.org/2q2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [https://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [https://pdbe.org/2q2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [https://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN]] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule.	+	[https://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 37:		Line 37:
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Krishna, R]]	+	[[Category: Krishna R]]
-	[[Category: Sankaranarayanan, R]]	+	[[Category: Sankaranarayanan R]]
-	[[Category: Vijayalakshmi, L]]	+	[[Category: Vijayalakshmi L]]
-	[[Category: Vijayan, M]]	+	[[Category: Vijayan M]]
-	~~[[Category: Lipocalin]]~~	+
-	~~[[Category: Transport protein]]~~	+
-	~~[[Category: Variant some~~]]	+

OCA at 07:48, 9 March 2022

OCA — Wed, 09 Mar 2022 07:48:26 GMT

←Older revision		Revision as of 07:48, 9 March 2022
Line 3:		Line 3:
	<StructureSection load='2q2p' size='340' side='right'caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>		<StructureSection load='2q2p' size='340' side='right'caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1b8e\|1b8e]], [[2q2m\|2q2m]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [~~http~~://pdbe.org/2q2p PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [https://pdbe.org/2q2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [https://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN]] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule.	+	[[https://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN]] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 06:59, 3 June 2020

OCA — Wed, 03 Jun 2020 06:59:12 GMT

←Older revision		Revision as of 06:59, 3 June 2020
Line 1:		Line 1:

	==Beta-lactoglobulin (reverse native)==		==Beta-lactoglobulin (reverse native)==
-	<StructureSection load='2q2p' size='340' side='right' caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>	+	<StructureSection load='2q2p' size='340' side='right'caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://pdbe.org/2q2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://pdbe.org/2q2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 30:		Line 30:

	==See Also==		==See Also==
-	*[[Beta-lactoglobulin\|Beta-lactoglobulin]]	+	*[[Beta-lactoglobulin 3D structures\|Beta-lactoglobulin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 36:		Line 36:
	</StructureSection>		</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
		+	[[Category: Large Structures]]
	[[Category: Krishna, R]]		[[Category: Krishna, R]]
	[[Category: Sankaranarayanan, R]]		[[Category: Sankaranarayanan, R]]

OCA at 08:15, 29 August 2018

OCA — Wed, 29 Aug 2018 08:15:07 GMT

←Older revision		Revision as of 08:15, 29 August 2018
Line 1:		Line 1:
		+
	==Beta-lactoglobulin (reverse native)==		==Beta-lactoglobulin (reverse native)==
	<StructureSection load='2q2p' size='340' side='right' caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>		<StructureSection load='2q2p' size='340' side='right' caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>		<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://pdbe.org/2q2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://pdbe.org/2q2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2q2p ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q2/2q2p_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q2/2q2p_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2q2p ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 00:21, 12 September 2015

OCA — Sat, 12 Sep 2015 00:21:39 GMT

←Older revision		Revision as of 00:21, 12 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>		<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://pdbe.org/2q2p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2q2p" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 21:20, 25 December 2014

OCA — Thu, 25 Dec 2014 21:20:54 GMT

←Older revision		Revision as of 21:20, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>		<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN]] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
-	[[Category: Krishna, R.]]	+	[[Category: Krishna, R]]
-	[[Category: Sankaranarayanan, R.]]	+	[[Category: Sankaranarayanan, R]]
-	[[Category: Vijayalakshmi, L.]]	+	[[Category: Vijayalakshmi, L]]
-	[[Category: Vijayan, M.]]	+	[[Category: Vijayan, M]]
	[[Category: Lipocalin]]		[[Category: Lipocalin]]
	[[Category: Transport protein]]		[[Category: Transport protein]]
	[[Category: Variant some]]		[[Category: Variant some]]

OCA at 07:16, 29 September 2014

OCA — Mon, 29 Sep 2014 07:16:40 GMT

←Older revision		Revision as of 07:16, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2q2p.~~png~~\|~~left~~\|200px]]	+	==Beta-lactoglobulin (reverse native)==
		+	<StructureSection load='2q2p' size='340' side='right' caption='[[2q2p]], [[Resolution\|resolution]] 2.96Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q2P FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1b8e\|1b8e]], [[2q2m\|2q2m]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q2p OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q2p RCSB], [http://www.ebi.ac.uk/pdbsum/2q2p PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q2/2q2p_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Dimeric lactoglobulin molecules exist in the open conformation at basic pH, whereas they exist in the closed conformation at acidic pH, after undergoing the Tanford transition around neutral pH. Orthorhombic crystals consisting of molecules in the open conformation, grown close to neutral pH, undergo a water-mediated transformation when the relative humidity around the crystals is reduced. The two subunits in the dimer are related by a crystallographic twofold axis in the native crystals while the dimer is asymmetric in the low humidity form. Interestingly, one of the subunits in the dimer in the low humidity form is in an open conformation while the other is in a closed conformation. This is the first observation of such an asymmetric dimer. A hydrogen bond between the side chains of Gln35 and Tyr42 exists and the side chain of Glu89 is substantially buried in the closed subunit of the asymmetric unit, as in other structures with molecules in the closed conformation. However, the closure of the EF loop is not complete; its conformation can be described as half-closed. A comparison of different crystal structures of beta-lactoglobulin indicates that the conformation of the loops in the molecule is substantially influenced by other factors such as crystal packing, the pH, and the composition of the medium, while the change in the conformation of the EF loop follows the Tanford transition. The mutual disposition of the two subunits in the low humidity form is halfway between those in the open and closed structures. The present work further demonstrates that structural changes that occur during partial dehydration could mimic those that occur during the action of proteins. Proteins 2008. (c) 2007 Wiley-Liss, Inc.

-	~~{{STRUCTURE_2q2p\| PDB=2q2p \| SCENE= }}~~	+	An asymmetric dimer of beta-lactoglobulin in a low humidity crystal form-Structural changes that accompany partial dehydration and protein action.,Vijayalakshmi L, Krishna R, Sankaranarayanan R, Vijayan M Proteins. 2007 Oct 11;71(1):241-249. PMID:17932936<ref>PMID:17932936</ref>

-	~~===Beta-lactoglobulin (reverse native)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17932936}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2q2p]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Bos_taurus Bos taurus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA].~~	+

	==See Also==		==See Also==
	*[[Beta-lactoglobulin\|Beta-lactoglobulin]]		*[[Beta-lactoglobulin\|Beta-lactoglobulin]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:017932936<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Krishna, R.]]		[[Category: Krishna, R.]]

OCA at 21:48, 20 October 2012

OCA — Sat, 20 Oct 2012 21:48:06 GMT

←Older revision		Revision as of 21:48, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2q2p]] is a 1 chain structure ~~of [[Beta-lactoglobulin]]~~ with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA].	+	[[2q2p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA].

	==See Also==		==See Also==

OCA: Protected "2q2p" [edit=sysop:move=sysop]

OCA — Fri, 27 Jul 2012 14:19:47 GMT

Protected "2q2p" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:19, 27 July 2012

OCA at 14:19, 27 July 2012

OCA — Fri, 27 Jul 2012 14:19:46 GMT

←Older revision		Revision as of 14:19, 27 July 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2q2p.png\|left\|200px]]		[[Image:2q2p.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2q2p", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2q2p\| PDB=2q2p \| SCENE= }}		{{STRUCTURE_2q2p\| PDB=2q2p \| SCENE= }}

	===Beta-lactoglobulin (reverse native)===		===Beta-lactoglobulin (reverse native)===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17932936}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17932936 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_17932936}}		{{ABSTRACT_PUBMED_17932936}}

	==About this Structure==		==About this Structure==
-	~~2Q2P~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA].	+	[[2q2p]] is a 1 chain structure of [[Beta-lactoglobulin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q2P OCA].
		+
		+	==See Also==
		+	*[[Beta-lactoglobulin\|Beta-lactoglobulin]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17932936~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017932936</ref><references group="xtra"/>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Krishna, R.]]		[[Category: Krishna, R.]]
Line 32:		Line 23:
	[[Category: Transport protein]]		[[Category: Transport protein]]
	[[Category: Variant some]]		[[Category: Variant some]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 07:57:50 2009''