2v7r - Revision history

OCA at 09:56, 9 May 2024

OCA — Thu, 09 May 2024 09:56:05 GMT

←Older revision		Revision as of 09:56, 9 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V7R FirstGlance]. <br>		<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [https://pdbe.org/2v7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [https://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.2Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [https://pdbe.org/2v7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [https://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 20:54, 12 April 2023

OCA — Wed, 12 Apr 2023 20:54:31 GMT

←Older revision		Revision as of 20:54, 12 April 2023
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	<StructureSection load='2v7r' size='340' side='right'caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='2v7r' size='340' side='right'caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V7R FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [https://pdbe.org/2v7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [https://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [https://pdbe.org/2v7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [https://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>
	</table>		</table>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Betzel, C]]	+	[[Category: Betzel C]]
-	[[Category: Erdmann~~, V A~~]]	+	[[Category: Erdmann VA]]
-	[[Category: Foerster, C]]	+	[[Category: Foerster C]]
-	[[Category: Fuerste~~, J P~~]]	+	[[Category: Fuerste JP]]
-	[[Category: Mankowska, M]]	+	[[Category: Mankowska M]]
-	[[Category: Perbandt, M]]	+	[[Category: Perbandt M]]
-	~~[[Category: Acceptor stem]]~~	+
-	~~[[Category: Glycine]]~~	+
-	~~[[Category: Hydration]]~~	+
-	~~[[Category: Identity]]~~	+
-	~~[[Category: Microhelix]]~~	+
-	~~[[Category: Rna]]~~	+
-	~~[[Category: Trna~~]]	+

OCA at 10:42, 7 July 2021

OCA — Wed, 07 Jul 2021 10:42:37 GMT

←Older revision		Revision as of 10:42, 7 July 2021
Line 3:		Line 3:
	<StructureSection load='2v7r' size='340' side='right'caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='2v7r' size='340' side='right'caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2V7R FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [~~http~~://pdbe.org/2v7r PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [https://pdbe.org/2v7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [https://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 07:38, 24 July 2019

OCA — Wed, 24 Jul 2019 07:38:39 GMT

←Older revision		Revision as of 07:38, 24 July 2019
Line 1:		Line 1:

	==Crystal structure of a human tRNAGly microhelix at 1.2 Angstrom resolution==		==Crystal structure of a human tRNAGly microhelix at 1.2 Angstrom resolution==
-	<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>	+	<StructureSection load='2v7r' size='340' side='right'caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V7R FirstGlance]. <br>		<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Betzel, C]]		[[Category: Betzel, C]]
	[[Category: Erdmann, V A]]		[[Category: Erdmann, V A]]

OCA at 08:50, 12 September 2018

OCA — Wed, 12 Sep 2018 08:50:31 GMT

←Older revision		Revision as of 08:50, 12 September 2018
Line 1:		Line 1:

-	==~~CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT~~ 1.2 ~~ANGSTROM RESOLUTION~~==	+	==Crystal structure of a human tRNAGly microhelix at 1.2 Angstrom resolution==
	<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==

OCA at 08:45, 11 August 2016

OCA — Thu, 11 Aug 2016 08:45:58 GMT

←Older revision		Revision as of 08:45, 11 August 2016
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION==		==CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION==
	<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>		<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V7R FirstGlance]. <br>		<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [http://www.ebi.ac.uk/pdbsum/2v7r PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [http://pdbe.org/2v7r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [http://www.ebi.ac.uk/pdbsum/2v7r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2v7r ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 13:		Line 14:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2v7r" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:39, 22 January 2015

OCA — Thu, 22 Jan 2015 06:39:49 GMT

←Older revision		Revision as of 06:39, 22 January 2015
Line 17:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Betzel, C.]]	+	[[Category: Betzel, C]]
-	[[Category: Erdmann, V A.]]	+	[[Category: Erdmann, V A]]
-	[[Category: Foerster, C.]]	+	[[Category: Foerster, C]]
-	[[Category: Fuerste, J P.]]	+	[[Category: Fuerste, J P]]
-	[[Category: Mankowska, M.]]	+	[[Category: Mankowska, M]]
-	[[Category: Perbandt, M.]]	+	[[Category: Perbandt, M]]
	[[Category: Acceptor stem]]		[[Category: Acceptor stem]]
	[[Category: Glycine]]		[[Category: Glycine]]

OCA at 11:27, 20 October 2014

OCA — Mon, 20 Oct 2014 11:27:15 GMT

←Older revision		Revision as of 11:27, 20 October 2014
Line 1:		Line 1:
-	[[~~Image~~:2v7r.~~png\|left\|200px~~]]	+	==CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION==
		+	<StructureSection load='2v7r' size='340' side='right' caption='[[2v7r]], [[Resolution\|resolution]] 1.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2V7R FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v7r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2v7r RCSB], [http://www.ebi.ac.uk/pdbsum/2v7r PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The tRNA(Gly)/glycyl-tRNA synthetase (GlyRS) system belongs to the so-called 'class II aminoacyl-tRNA synthetase system' in which tRNA identity elements are assured by rather few and simple determinants mostly located in the tRNA acceptor stem. Regarding evolutionary aspects, the tRNA(Gly)/GlyRS system is a special case. There exist two different types of GlyRS, namely an archaebacterial/human type and a eubacterial type reflecting an evolutionary divergence within this system. Here we report the crystal structure of a human tRNA(Gly) acceptor stem microhelix at 1.2A resolution. The local geometric parameters of the microhelix and the water network surrounding the RNA are presented. The structure complements the previously published Escherichia coli tRNA(Gly) aminoacyl stem structure.

-	~~{{STRUCTURE_2v7r\| PDB=2v7r \| SCENE= }}~~	+	Crystal structure of a human tRNA(Gly) microhelix at 1.2A resolution.,Forster C, Mankowska M, Furste JP, Perbandt M, Betzel Ch, Erdmann VA Biochem Biophys Res Commun. 2008 Apr 18;368(4):996-1001. Epub 2008 Feb 13. PMID:18279665<ref>PMID:18279665</ref>

-	~~===CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1~~.~~2 ANGSTROM RESOLUTION===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18279665}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http:~~//~~oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA].~~	+	</StructureSection>
	[[Category: Betzel, C.]]		[[Category: Betzel, C.]]
	[[Category: Erdmann, V A.]]		[[Category: Erdmann, V A.]]

OCA: Protected "2v7r" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 18:59:40 GMT

Protected "2v7r" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:59, 7 January 2013

OCA at 18:59, 7 January 2013

OCA — Mon, 07 Jan 2013 18:59:38 GMT

←Older revision		Revision as of 18:59, 7 January 2013
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-	{{Seed}}
	[[Image:2v7r.png\|left\|200px]]		[[Image:2v7r.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2v7r", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2v7r\| PDB=2v7r \| SCENE= }}		{{STRUCTURE_2v7r\| PDB=2v7r \| SCENE= }}

	===CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION===		===CRYSTAL STRUCTURE OF A HUMAN TRNAGLY MICROHELIX AT 1.2 ANGSTROM RESOLUTION===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18279665}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 18279665 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_18279665}}		{{ABSTRACT_PUBMED_18279665}}

	==About this Structure==		==About this Structure==
-	~~2V7R is a~~ [[~~Single protein~~]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA].	+	[[2v7r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V7R OCA].
-		+
-	~~==Reference==~~	+
-	Crystal structure of a human tRNA(Gly) microhelix at 1.2A resolution., Forster C, Mankowska M, Furste JP, Perbandt M, Betzel Ch, Erdmann VA, Biochem Biophys Res Commun. 2008 Apr 18;368(4):996-1001. Epub 2008 Feb 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18279665 18279665]	+
-	~~[[Category: Single protein]]~~	+
	[[Category: Betzel, C.]]		[[Category: Betzel, C.]]
	[[Category: Erdmann, V A.]]		[[Category: Erdmann, V A.]]
Line 38:		Line 22:
	[[Category: Rna]]		[[Category: Rna]]
	[[Category: Trna]]		[[Category: Trna]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 14:54:30 2008''