2vrz - Revision history

OCA at 11:45, 30 March 2022

OCA — Wed, 30 Mar 2022 11:45:11 GMT

←Older revision		Revision as of 11:45, 30 March 2022
Line 3:		Line 3:
	<StructureSection load='2vrz' size='340' side='right'caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2vrz' size='340' side='right'caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2vs0\|2vs0]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [~~http~~://pdbe.org/2vrz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2vrz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [https://pdbe.org/2vrz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [https://www.ebi.ac.uk/pdbsum/2vrz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 31:		Line 31:
	==See Also==		==See Also==
	*[[Flock house virus protein B2\|Flock house virus protein B2]]		*[[Flock house virus protein B2\|Flock house virus protein B2]]
-	*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:27, 25 June 2020

OCA — Thu, 25 Jun 2020 08:27:01 GMT

←Older revision		Revision as of 08:27, 25 June 2020
Line 1:		Line 1:

	==Structural analysis of homodimeric staphylococcal aureus EsxA==		==Structural analysis of homodimeric staphylococcal aureus EsxA==
-	<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='2vrz' size='340' side='right'caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://pdbe.org/2vrz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://pdbe.org/2vrz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 36:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Hunter, W N]]		[[Category: Hunter, W N]]
	[[Category: Sundaramoorthy, R]]		[[Category: Sundaramoorthy, R]]

OCA at 20:49, 19 September 2018

OCA — Wed, 19 Sep 2018 20:49:04 GMT

←Older revision		Revision as of 20:49, 19 September 2018
Line 1:		Line 1:
-	==~~STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA~~==	+
		+	==Structural analysis of homodimeric staphylococcal aureus EsxA==
	<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://pdbe.org/2vrz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://pdbe.org/2vrz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/2vrz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/2vrz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 12:49, 7 February 2016

OCA — Sun, 07 Feb 2016 12:49:01 GMT

←Older revision		Revision as of 12:49, 7 February 2016
Line 2:		Line 2:
	<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus~~ aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://pdbe.org/2vrz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vrz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2vrz" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
-	*[[Flock house virus B2 protein ~~Suppression of RNA Silencing~~\|Flock house virus B2 protein ~~Suppression of RNA Silencing~~]]	+	*[[Flock house virus protein B2\|Flock house virus protein B2]]
	*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]		*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]
	== References ==		== References ==
Line 34:		Line 35:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Staphylococcus aureus]]
	[[Category: Hunter, W N]]		[[Category: Hunter, W N]]
	[[Category: Sundaramoorthy, R]]		[[Category: Sundaramoorthy, R]]

OCA at 15:19, 19 January 2015

OCA — Mon, 19 Jan 2015 15:19:17 GMT

←Older revision		Revision as of 15:19, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 35:
	</StructureSection>		</StructureSection>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
-	[[Category: Hunter, W N.]]	+	[[Category: Hunter, W N]]
-	[[Category: Sundaramoorthy, R.]]	+	[[Category: Sundaramoorthy, R]]
	[[Category: Cell invasion]]		[[Category: Cell invasion]]
	[[Category: Four helical bundle]]		[[Category: Four helical bundle]]

OCA at 01:58, 1 October 2014

OCA — Wed, 01 Oct 2014 01:58:02 GMT

←Older revision		Revision as of 01:58, 1 October 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_2vrz\| PDB=2vrz \| SCENE= }}~~	+	==STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA==
-	===STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA===	+	<StructureSection load='2vrz' size='340' side='right' caption='[[2vrz]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~{{ABSTRACT_PUBMED_18773907}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VRZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2vs0\|2vs0]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vrz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vrz RCSB], [http://www.ebi.ac.uk/pdbsum/2vrz PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/2vrz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Staphylococcus aureus pathogenesis depends on a specialized protein secretion system (ESX-1) that delivers a range of virulence factors to assist infectivity. We report the characterization of two such factors, EsxA and EsxB, small acidic dimeric proteins carrying a distinctive WXG motif. EsxA crystallized in triclinic and monoclinic forms and high-resolution structures were determined. The asymmetric unit of each crystal form is a dimer. The EsxA subunit forms an elongated cylindrical structure created from side-by-side alpha-helices linked with a hairpin bend formed by the WXG motif. Approximately 25% of the solvent accessible surface area of each subunit is involved in interactions, predominantly hydrophobic, with the partner subunit. Secondary-structure predictions suggest that EsxB displays a similar structure. The WXG motif helps to create a shallow cleft at each end of the dimer, forming a short beta-sheet-like feature with an N-terminal segment of the partner subunit. Structural and sequence comparisons, exploiting biological data on related proteins found in Mycobacterium tuberculosis, suggest that this family of proteins may contribute to pathogenesis by transporting protein cargo through the ESX-1 system exploiting a C-terminal secretion signal and/or are capable of acting as adaptor proteins to facilitate interactions with host receptor proteins.

-	~~==About this~~ Structure==	+	Structure of Staphylococcus aureus EsxA suggests a contribution to virulence by action as a transport chaperone and/or adaptor protein.,Sundaramoorthy R, Fyfe PK, Hunter WN J Mol Biol. 2008 Nov 14;383(3):603-14. Epub 2008 Aug 27. PMID:18773907<ref>PMID:18773907</ref>
-	~~[[2vrz]] is~~ a ~~2 chain structure with sequence from [http:/~~/en.~~wikipedia~~.~~org/wiki/Staphylococcus_aureus Staphylococcus aureus]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=2VRZ OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Flock house virus B2 protein Suppression of RNA Silencing\|Flock house virus B2 protein Suppression of RNA Silencing]]		*[[Flock house virus B2 protein Suppression of RNA Silencing\|Flock house virus B2 protein Suppression of RNA Silencing]]
	*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]		*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:018773907<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Hunter, W N.]]		[[Category: Hunter, W N.]]

OCA at 09:50, 11 March 2013

OCA — Mon, 11 Mar 2013 09:50:44 GMT

←Older revision		Revision as of 09:50, 11 March 2013
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-	[[Image:2vrz.png\|left\|200px]]
-
	{{STRUCTURE_2vrz\| PDB=2vrz \| SCENE= }}		{{STRUCTURE_2vrz\| PDB=2vrz \| SCENE= }}
-
	===STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA===		===STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA===
-
	{{ABSTRACT_PUBMED_18773907}}		{{ABSTRACT_PUBMED_18773907}}

OCA at 06:42, 20 October 2012

OCA — Sat, 20 Oct 2012 06:42:04 GMT

←Older revision		Revision as of 06:42, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[2vrz]] is a 2 chain structure ~~of [[Flock house virus B2 protein Suppression of RNA Silencing]]~~ with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA].	+	[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA].

	==See Also==		==See Also==

OCA at 14:02, 25 July 2012

OCA — Wed, 25 Jul 2012 14:02:04 GMT

←Older revision		Revision as of 14:02, 25 July 2012
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	[[Image:2vrz.png\|left\|200px]]		[[Image:2vrz.png\|left\|200px]]

-	<!--
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-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2vrz\| PDB=2vrz \| SCENE= }}		{{STRUCTURE_2vrz\| PDB=2vrz \| SCENE= }}

	===STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA===		===STRUCTURAL ANALYSIS OF HOMODIMERIC STAPHYLOCOCCAL AUREUS ESXA===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18773907}}, adds the Publication Abstract to the page
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	{{ABSTRACT_PUBMED_18773907}}		{{ABSTRACT_PUBMED_18773907}}

	==About this Structure==		==About this Structure==
-	[[2vrz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA].	+	[[2vrz]] is a 2 chain structure of [[Flock house virus B2 protein Suppression of RNA Silencing]] with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRZ OCA].

	==See Also==		==See Also==
-	*[[Flock house virus B2 protein Suppression of RNA Silencing]]	+	*[[Flock house virus B2 protein Suppression of RNA Silencing\|Flock house virus B2 protein Suppression of RNA Silencing]]
-	*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]	+	*[[User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing\|User:Wayne Decatur/Flock house virus B2 protein Suppression of RNA Silencing]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18773907~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018773907</ref><references group="xtra"/>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Hunter, W N.]]		[[Category: Hunter, W N.]]

OCA: Protected "2vrz" [edit=sysop:move=sysop]

OCA — Sun, 09 Jan 2011 10:50:09 GMT

Protected "2vrz" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:50, 9 January 2011