2wt2 - Revision history

OCA at 10:15, 20 December 2023

OCA — Wed, 20 Dec 2023 10:15:41 GMT

←Older revision		Revision as of 10:15, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='2wt2' size='340' side='right'caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2wt2' size='340' side='right'caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Adep4 Adep4~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porcine_adenovirus_4 Porcine adenovirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~"><~~scene name~~='~~pdbligand~~=~~NO3~~:~~NITRATE+ION'~~>~~NO3~~</~~scene~~>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene><~~/td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;~~'>~~[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [https://pdbe.org/2wt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [https://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [https://pdbe.org/2wt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [https://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q83467_ADEP4 Q83467_ADEP4]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 31:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Adep4]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Fox~~, G C~~]]	+	[[Category: Porcine adenovirus 4]]
-	[[Category: Glasgow~~, J N~~]]	+	[[Category: Fox GC]]
-	[[Category: Guardado-Calvo, P]]	+	[[Category: Glasgow JN]]
-	[[Category: Llamas-Saiz~~, A L~~]]	+	[[Category: Guardado-Calvo P]]
-	[[Category: Munoz~~, E M~~]]	+	[[Category: Llamas-Saiz AL]]
-	[[Category: Raaij~~, M J.van]]~~	+	[[Category: Munoz EM]]
-	~~[[Category: Viral protein~~]]	+	[[Category: Van Raaij MJ]]

OCA at 10:58, 7 July 2021

OCA — Wed, 07 Jul 2021 10:58:23 GMT

←Older revision		Revision as of 10:58, 7 July 2021
Line 3:		Line 3:
	<StructureSection load='2wt2' size='340' side='right'caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2wt2' size='340' side='right'caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~GAL~~:~~BETA-D-GALACTOSE~~'>~~GAL~~</scene>, <scene name='pdbligand=~~NAG~~:~~N-ACETYL~~-D-~~GLUCOSAMINE~~'>~~NAG~~</scene>, <scene name='pdbligand=~~NO3~~:~~NITRATE+ION~~'>~~NO3~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [~~http~~://pdbe.org/2wt2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [https://pdbe.org/2wt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [https://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:44, 24 July 2019

OCA — Wed, 24 Jul 2019 07:44:24 GMT

←Older revision		Revision as of 07:44, 24 July 2019
Line 1:		Line 1:

	==Galectin domain of porcine adenovirus type 4 NADC-1 isolate fibre complexed with tri(N-acetyl-lactosamine)==		==Galectin domain of porcine adenovirus type 4 NADC-1 isolate fibre complexed with tri(N-acetyl-lactosamine)==
-	<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='2wt2' size='340' side='right'caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Adep4]]		[[Category: Adep4]]
		+	[[Category: Large Structures]]
	[[Category: Fox, G C]]		[[Category: Fox, G C]]
	[[Category: Glasgow, J N]]		[[Category: Glasgow, J N]]

OCA at 07:30, 17 January 2018

OCA — Wed, 17 Jan 2018 07:30:43 GMT

←Older revision		Revision as of 07:30, 17 January 2018
Line 1:		Line 1:

-	==~~GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE~~ 4 NADC-1 ~~ISOLATE FIBRE COMPLEXED WITH TRI~~(N-~~ACETYL~~-~~LACTOSAMINE~~)==	+	==Galectin domain of porcine adenovirus type 4 NADC-1 isolate fibre complexed with tri(N-acetyl-lactosamine)==
	<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=~~NO3~~:~~NITRATE+ION~~'>~~NO3~~</scene>, <scene name='pdbligand=~~GAL~~:~~BETA~~-D-~~GALACTOSE~~'>~~GAL~~</scene>, <scene name='pdbligand=~~NAG~~:~~N-ACETYL-D-GLUCOSAMINE~~'>~~NAG~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [http://pdbe.org/2wt2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [http://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [http://pdbe.org/2wt2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [http://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wt/2wt2_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wt/2wt2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 37:		Line 37:
	[[Category: Llamas-Saiz, A L]]		[[Category: Llamas-Saiz, A L]]
	[[Category: Munoz, E M]]		[[Category: Munoz, E M]]
-	[[Category: Raaij, M J.~~Van~~]]	+	[[Category: Raaij, M J.van]]
	[[Category: Viral protein]]		[[Category: Viral protein]]

OCA at 17:58, 11 August 2016

OCA — Thu, 11 Aug 2016 17:58:37 GMT

←Older revision		Revision as of 17:58, 11 August 2016
Line 1:		Line 1:
		+
	==GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)==		==GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)==
	<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Porcine_adenovirus_4 Porcine adenovirus 4~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Adep4 Adep4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [http://www.ebi.ac.uk/pdbsum/2wt2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [http://pdbe.org/2wt2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [http://www.ebi.ac.uk/pdbsum/2wt2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wt2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wt2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 25:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2wt2" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Porcine adenovirus 4~~]]	+	[[Category: Adep4]]
	[[Category: Fox, G C]]		[[Category: Fox, G C]]
	[[Category: Glasgow, J N]]		[[Category: Glasgow, J N]]

OCA at 08:52, 26 November 2014

OCA — Wed, 26 Nov 2014 08:52:29 GMT

←Older revision		Revision as of 08:52, 26 November 2014
Line 1:		Line 1:
-	[[~~Image:~~2wt2.~~png~~\|~~left~~\|200px]]	+	==GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)==
		+	<StructureSection load='2wt2' size='340' side='right' caption='[[2wt2]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Porcine_adenovirus_4 Porcine adenovirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WT2 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wt0\|2wt0]], [[2wt1\|2wt1]], [[2wsv\|2wsv]], [[2wsu\|2wsu]], [[2wst\|2wst]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wt2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wt2 RCSB], [http://www.ebi.ac.uk/pdbsum/2wt2 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wt/2wt2_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Adenovirus isolate NADC-1, a strain of porcine adenovirus type 4, has a fiber containing an N-terminal virus attachment region, shaft and head domains, and a C-terminal galectin domain connected to the head by an RGD-containing sequence. The crystal structure of the head domain is similar to previously solved adenovirus fiber head domains, but specific residues for binding the coxsackievirus and adenovirus receptor (CAR), CD46, or sialic acid are not conserved. The structure of the galectin domain reveals an interaction interface between its two carbohydrate recognition domains, locating both sugar binding sites face to face. Sequence evidence suggests other tandem-repeat galectins have the same arrangement. We show that the galectin domain binds carbohydrates containing lactose and N-acetyl-lactosamine units, and we present structures of the galectin domain with lactose, N-acetyl-lactosamine, 3-aminopropyl-lacto-N-neotetraose, and 2-aminoethyl-tri(N-acetyl-lactosamine), confirming the domain as a bona fide galectin domain.

-	~~{{STRUCTURE_2wt2\| PDB=2wt2 \| SCENE= }}~~	+	Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains.,Guardado-Calvo P, Munoz EM, Llamas-Saiz AL, Fox GC, Kahn R, Curiel DT, Glasgow JN, van Raaij MJ J Virol. 2010 Oct;84(20):10558-68. Epub 2010 Aug 4. PMID:20686025<ref>PMID:20686025</ref>

-	~~===GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_20686025}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2wt2]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Porcine_adenovirus_4 Porcine adenovirus 4]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:020686025<~~/~~ref~~><~~ref group="xtra">PMID:008837892</ref><ref group="xtra">PMID:019923738</ref><references group="xtra"~~/>	+
	[[Category: Porcine adenovirus 4]]		[[Category: Porcine adenovirus 4]]
-	[[Category: Fox, G C.]]	+	[[Category: Fox, G C]]
-	[[Category: Glasgow, J N.]]	+	[[Category: Glasgow, J N]]
-	[[Category: Guardado-Calvo, P.]]	+	[[Category: Guardado-Calvo, P]]
-	[[Category: Llamas-Saiz, A L.]]	+	[[Category: Llamas-Saiz, A L]]
-	[[Category: Munoz, E M.]]	+	[[Category: Munoz, E M]]
-	[[Category: Raaij, M J.Van.]]	+	[[Category: Raaij, M J.Van]]
	[[Category: Viral protein]]		[[Category: Viral protein]]

OCA at 14:42, 20 February 2013

OCA — Wed, 20 Feb 2013 14:42:50 GMT

←Older revision		Revision as of 14:42, 20 February 2013
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	[[Image:2wt2.png\|left\|200px]]		[[Image:2wt2.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2wt2", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2wt2\| PDB=2wt2 \| SCENE= }}		{{STRUCTURE_2wt2\| PDB=2wt2 \| SCENE= }}

	===GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)===		===GALECTIN DOMAIN OF PORCINE ADENOVIRUS TYPE 4 NADC-1 ISOLATE FIBRE COMPLEXED WITH TRI(N-ACETYL-LACTOSAMINE)===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20686025}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20686025 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20686025}}		{{ABSTRACT_PUBMED_20686025}}

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	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20686025~~</ref><ref group="xtra">PMID:~~8837892~~</ref><ref group="xtra">PMID:~~18756624</ref><ref group="xtra">PMID:19923738~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020686025</ref><ref group="xtra">PMID:008837892</ref><ref group="xtra">PMID:019923738</ref><references group="xtra"/>
	[[Category: Porcine adenovirus 4]]		[[Category: Porcine adenovirus 4]]
	[[Category: Fox, G C.]]		[[Category: Fox, G C.]]
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	[[Category: Munoz, E M.]]		[[Category: Munoz, E M.]]
	[[Category: Raaij, M J.Van.]]		[[Category: Raaij, M J.Van.]]
		+	[[Category: Viral protein]]

OCA at 04:35, 13 April 2011

OCA — Wed, 13 Apr 2011 04:35:40 GMT

←Older revision		Revision as of 04:35, 13 April 2011
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	==Reference==		==Reference==
-	<ref group="xtra">PMID:20686025</ref><ref group="xtra">PMID:8837892</ref><ref group="xtra">PMID:18756624</ref><references group="xtra"/>	+	<ref group="xtra">PMID:20686025</ref><ref group="xtra">PMID:8837892</ref><ref group="xtra">PMID:18756624</ref><ref group="xtra">PMID:19923738</ref><references group="xtra"/>
	[[Category: Porcine adenovirus 4]]		[[Category: Porcine adenovirus 4]]
	[[Category: Fox, G C.]]		[[Category: Fox, G C.]]
Line 30:		Line 30:
	[[Category: Munoz, E M.]]		[[Category: Munoz, E M.]]
	[[Category: Raaij, M J.Van.]]		[[Category: Raaij, M J.Van.]]
-	[[Category: Viral protein]]

OCA: Protected "2wt2" [edit=sysop:move=sysop]

OCA — Mon, 14 Mar 2011 18:26:34 GMT

Protected "2wt2" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:26, 14 March 2011

OCA at 18:26, 14 March 2011

OCA — Mon, 14 Mar 2011 18:26:33 GMT

←Older revision		Revision as of 18:26, 14 March 2011
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-	{{Seed}}
	[[Image:2wt2.png\|left\|200px]]		[[Image:2wt2.png\|left\|200px]]

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	==About this Structure==		==About this Structure==
-	~~2WT2~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Porcine_adenovirus_4 Porcine adenovirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA].	+	[[2wt2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Porcine_adenovirus_4 Porcine adenovirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WT2 OCA].

	==Reference==		==Reference==
Line 32:		Line 31:
	[[Category: Raaij, M J.Van.]]		[[Category: Raaij, M J.Van.]]
	[[Category: Viral protein]]		[[Category: Viral protein]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 29 07:48:38 2010''