2wvk - Revision history

OCA at 10:17, 20 December 2023

OCA — Wed, 20 Dec 2023 10:17:42 GMT

←Older revision		Revision as of 10:17, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='2wvk' size='340' side='right'caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>		<StructureSection load='2wvk' size='340' side='right'caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet2 Thet2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVK FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>~~, ~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.97Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[2wvl\|2wvl]], [[2wvm\|2wvm]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>[https://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [https://pdbe.org/2wvk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [https://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [https://pdbe.org/2wvk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [https://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q72K30_THET2 Q72K30_THET2]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Mannosyl-3-phosphoglycerate synthase]]~~	+	[[Category: Thermus thermophilus HB27]]
-	~~[[Category: Thet2~~]]	+	[[Category: Borges N]]
-	[[Category: Borges, N]]	+	[[Category: Esteves AM]]
-	[[Category: Esteves~~, A M~~]]	+	[[Category: Goncalves S]]
-	[[Category: Goncalves, S]]	+	[[Category: Matias PM]]
-	[[Category: Matias~~, P M~~]]	+	[[Category: Santos H]]
-	[[Category: Santos, H]]	+	[[Category: Soares CM]]
-	[[Category: Soares~~, C M~~]]	+	[[Category: Victor B]]
-	[[Category: Victor, B]]	+
-	~~[[Category: Gt-a fold]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 10:40, 13 April 2022

OCA — Wed, 13 Apr 2022 10:40:49 GMT

←Older revision		Revision as of 10:40, 13 April 2022
Line 3:		Line 3:
	<StructureSection load='2wvk' size='340' side='right'caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>		<StructureSection load='2wvk' size='340' side='right'caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2WVK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVK FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2wvl\|2wvl]], [[2wvm\|2wvm]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [~~http~~://pdbe.org/2wvk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [https://pdbe.org/2wvk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [https://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 14:58, 8 July 2020

OCA — Wed, 08 Jul 2020 14:58:14 GMT

←Older revision		Revision as of 14:58, 8 July 2020
Line 1:		Line 1:

	==Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein==		==Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein==
-	<StructureSection load='2wvk' size='340' side='right' caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>	+	<StructureSection load='2wvk' size='340' side='right'caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2WVK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WVK FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [http://pdbe.org/2wvk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [http://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [http://pdbe.org/2wvk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [http://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Mannosyl-3-phosphoglycerate synthase]]		[[Category: Mannosyl-3-phosphoglycerate synthase]]
	[[Category: Thet2]]		[[Category: Thet2]]

OCA at 09:40, 3 October 2018

OCA — Wed, 03 Oct 2018 09:40:54 GMT

←Older revision		Revision as of 09:40, 3 October 2018
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvk_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvk_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 03:27, 5 August 2016

OCA — Fri, 05 Aug 2016 03:27:39 GMT

←Older revision		Revision as of 03:27, 5 August 2016
Line 1:		Line 1:
		+
	==Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein==		==Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein==
	<StructureSection load='2wvk' size='340' side='right' caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>		<StructureSection load='2wvk' size='340' side='right' caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [http://www.ebi.ac.uk/pdbsum/2wvk PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [http://pdbe.org/2wvk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [http://www.ebi.ac.uk/pdbsum/2wvk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvk ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wvk ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2wvk" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 17:17, 21 December 2014

OCA — Sun, 21 Dec 2014 17:17:37 GMT

←Older revision		Revision as of 17:17, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_2wvk~~\| ~~PDB~~=2wvk \| ~~SCENE~~= }}	+	==Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein==
-	===Mannosyl-3-phosphoglycerate synthase from ~~Thermus thermophilus HB27 apoprotein~~===	+	<StructureSection load='2wvk' size='340' side='right' caption='[[2wvk]], [[Resolution\|resolution]] 2.97Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20356840}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVK FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2wvl\|2wvl]], [[2wvm\|2wvm]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-3-phosphoglycerate_synthase Mannosyl-3-phosphoglycerate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.217 2.4.1.217] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvk RCSB], [http://www.ebi.ac.uk/pdbsum/2wvk PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvk_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Mannosyl-3-phosphoglycerate synthase is a glycosyltransferase involved in the two-step synthetic pathway of mannosylglycerate, a compatible solute that accumulates in response to salt and/or heat stresses in many microorganisms thriving in hot environments. The three-dimensional structure of mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 in its binary complex form, with GDP-alpha-D-mannose and Mg(2+), shows a second metal binding site, about 6 A away from the mannose moiety. Kinetic and mutagenesis studies have shown that this metal site plays a role in catalysis. Additionally, Asp(167) in the DXD motif is found within van der Waals contact distance of the C1' atom in the mannopyranose ring, suggesting its action as a catalytic nucleophile, either in the formation of a glycosyl-enzyme intermediate according to the double-displacement S(N)2 reaction mechanism or in the stabilization of the oxocarbenium ion-like intermediate according to the D(N)*A(Nss) (S(N)i-like) reaction mechanism. We propose that either mechanism may occur in retaining glycosyltransferases with a GT-A fold, and, based on the gathered structural information, we identified an extended structural signature toward a common scaffold between the inverting and retaining glycosyltransferases.

-	~~==About this Structure==~~	+	Structural analysis of Thermus thermophilus HB27 mannosyl-3-phosphoglycerate synthase provides evidence for a second catalytic metal ion and new insight into the retaining mechanism of glycosyltransferases.,Goncalves S, Borges N, Esteves AM, Victor BL, Soares CM, Santos H, Matias PM J Biol Chem. 2010 Jun 4;285(23):17857-68. Epub 2010 Mar 31. PMID:20356840<ref>PMID:20356840</ref>
-	~~[[2wvk]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=2WVK OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:020356840</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Mannosyl-3-phosphoglycerate synthase]]		[[Category: Mannosyl-3-phosphoglycerate synthase]]
	[[Category: Thet2]]		[[Category: Thet2]]
-	[[Category: Borges, N.]]	+	[[Category: Borges, N]]
-	[[Category: Esteves, A M.]]	+	[[Category: Esteves, A M]]
-	[[Category: Goncalves, S.]]	+	[[Category: Goncalves, S]]
-	[[Category: Matias, P M.]]	+	[[Category: Matias, P M]]
-	[[Category: Santos, H.]]	+	[[Category: Santos, H]]
-	[[Category: Soares, C M.]]	+	[[Category: Soares, C M]]
-	[[Category: Victor, B.]]	+	[[Category: Victor, B]]
	[[Category: Gt-a fold]]		[[Category: Gt-a fold]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 14:39, 19 February 2014

OCA — Wed, 19 Feb 2014 14:39:40 GMT

←Older revision		Revision as of 14:39, 19 February 2014
Line 1:		Line 1:
-	[[Image:2wvk.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_2wvk", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2wvk\| PDB=2wvk \| SCENE= }}		{{STRUCTURE_2wvk\| PDB=2wvk \| SCENE= }}
-		+	===Mannosyl-3-phosphoglycerate synthase from Thermus thermophilus HB27 apoprotein===
-	===~~MANNOSYL~~-3-~~PHOSPHOGLYCERATE SYNTHASE FROM THERMUS THERMOPHILUS~~ HB27 ~~APOPROTEIN~~===	+
-		+
-		+
-	~~<!--~~	+
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_20356840}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at http://www.pubmed.gov), where 20356840 is the PubMed ID number.~~	+
-	~~-->~~	+
	{{ABSTRACT_PUBMED_20356840}}		{{ABSTRACT_PUBMED_20356840}}

	==About this Structure==		==About this Structure==
-	[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus Thermus thermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA].	+	[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet2 Thet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:020356840</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020356840</ref><references group="xtra"/><references/>
	[[Category: Mannosyl-3-phosphoglycerate synthase]]		[[Category: Mannosyl-3-phosphoglycerate synthase]]
-	[[Category: ~~Thermus thermophilus~~]]	+	[[Category: Thet2]]
	[[Category: Borges, N.]]		[[Category: Borges, N.]]
	[[Category: Esteves, A M.]]		[[Category: Esteves, A M.]]

OCA at 06:21, 24 August 2011

OCA — Wed, 24 Aug 2011 06:21:37 GMT

←Older revision		Revision as of 06:21, 24 August 2011
Line 22:		Line 22:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20356840</ref><ref group="xtra">PMID:19851010~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020356840</ref><references group="xtra"/>
	[[Category: Mannosyl-3-phosphoglycerate synthase]]		[[Category: Mannosyl-3-phosphoglycerate synthase]]
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
Line 32:		Line 32:
	[[Category: Soares, C M.]]		[[Category: Soares, C M.]]
	[[Category: Victor, B.]]		[[Category: Victor, B.]]
-	[[Category: Glucosyl transferase]]
-	[[Category: Glycosyltransferase]]
	[[Category: Gt-a fold]]		[[Category: Gt-a fold]]
-	[[Category: Retaining mechanism]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "2wvk" [edit=sysop:move=sysop]

OCA — Mon, 14 Mar 2011 19:01:31 GMT

Protected "2wvk" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:01, 14 March 2011

OCA at 19:01, 14 March 2011

OCA — Mon, 14 Mar 2011 19:01:29 GMT

←Older revision		Revision as of 19:01, 14 March 2011
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2wvk.png\|left\|200px]]		[[Image:2wvk.png\|left\|200px]]

Line 20:		Line 19:

	==About this Structure==		==About this Structure==
-	~~2WVK~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA].	+	[[2wvk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVK OCA].

	==Reference==		==Reference==
Line 38:		Line 37:
	[[Category: Retaining mechanism]]		[[Category: Retaining mechanism]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 14 09:10:19 2010''