2wvw - Revision history

OCA at 10:37, 12 January 2022

OCA — Wed, 12 Jan 2022 10:37:47 GMT

←Older revision		Revision as of 10:37, 12 January 2022
Line 3:		Line 3:
	<SX load='2wvw' size='340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>		<SX load='2wvw' size='340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Anasc Anasc] and [~~http~~://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2WVW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Anasc Anasc] and [https://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1rsc\|1rsc]], [[1rbl\|1rbl]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [~~http~~://pdbe.org/2wvw PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2wvw PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [https://pdbe.org/2wvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [https://www.ebi.ac.uk/pdbsum/2wvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/RBL_SYNP6 RBL_SYNP6]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]	+	[[https://www.uniprot.org/uniprot/RBL_SYNP6 RBL_SYNP6]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 17:05, 10 April 2020

OCA — Fri, 10 Apr 2020 17:05:03 GMT

←Older revision		Revision as of 17:05, 10 April 2020
Line 3:		Line 3:
	<SX load='2wvw' size='340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>		<SX load='2wvw' size='340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2WVW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://pdbe.org/2wvw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://pdbe.org/2wvw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 17:00, 6 March 2020

OCA — Fri, 06 Mar 2020 17:00:08 GMT

←Older revision		Revision as of 17:00, 6 March 2020
Line 1:		Line 1:

	==Cryo-EM structure of the RbcL-RbcX complex==		==Cryo-EM structure of the RbcL-RbcX complex==
-	<~~StructureSection~~ load='2wvw' size='340' side='right'caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>	+	<SX load='2wvw' size='340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
Line 31:		Line 31:

	==See Also==		==See Also==
-	*[[RuBisCO\|RuBisCO]]	+	*[[RuBisCO 3D structures\|RuBisCO 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Anacystis nidulans]]		[[Category: Anacystis nidulans]]
	[[Category: Anasc]]		[[Category: Anasc]]

OCA at 07:16, 23 October 2019

OCA — Wed, 23 Oct 2019 07:16:23 GMT

←Older revision		Revision as of 07:16, 23 October 2019
Line 1:		Line 1:

	==Cryo-EM structure of the RbcL-RbcX complex==		==Cryo-EM structure of the RbcL-RbcX complex==
-	<StructureSection load='2wvw' size='340' side='right' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>	+	<StructureSection load='2wvw' size='340' side='right'caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
Line 38:		Line 38:
	[[Category: Anacystis nidulans]]		[[Category: Anacystis nidulans]]
	[[Category: Anasc]]		[[Category: Anasc]]
		+	[[Category: Large Structures]]
	[[Category: Ribulose-bisphosphate carboxylase]]		[[Category: Ribulose-bisphosphate carboxylase]]
	[[Category: Beckmann, R]]		[[Category: Beckmann, R]]

OCA at 08:15, 3 October 2018

OCA — Wed, 03 Oct 2018 08:15:14 GMT

←Older revision		Revision as of 08:15, 3 October 2018
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvw_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvw_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 15:52, 5 August 2016

OCA — Fri, 05 Aug 2016 15:52:30 GMT

←Older revision		Revision as of 15:52, 5 August 2016
Line 1:		Line 1:
		+
	==Cryo-EM structure of the RbcL-RbcX complex==		==Cryo-EM structure of the RbcL-RbcX complex==
	<StructureSection load='2wvw' size='340' side='right' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>		<StructureSection load='2wvw' size='340' side='right' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Anabaena_sp._ca Anabaena sp. ca~~] and [http://en.wikipedia.org/wiki/~~Synechococcus_elongatus Synechococcus elongatus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anasc Anasc] and [http://en.wikipedia.org/wiki/Anacystis_nidulans Anacystis nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://pdbe.org/2wvw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wvw ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 27:		Line 28:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2wvw" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 34:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Anabaena sp. ca~~]]	+	[[Category: Anacystis nidulans]]
		+	[[Category: Anasc]]
	[[Category: Ribulose-bisphosphate carboxylase]]		[[Category: Ribulose-bisphosphate carboxylase]]
-	[[Category: Synechococcus elongatus]]
	[[Category: Beckmann, R]]		[[Category: Beckmann, R]]
	[[Category: Berninghausen, O]]		[[Category: Berninghausen, O]]

OCA at 20:02, 25 December 2014

OCA — Thu, 25 Dec 2014 20:02:54 GMT

←Older revision		Revision as of 20:02, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca] and [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca] and [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/RBL_SYNP6 RBL_SYNP6]] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.[HAMAP-Rule:MF_01338]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 37:
	[[Category: Ribulose-bisphosphate carboxylase]]		[[Category: Ribulose-bisphosphate carboxylase]]
	[[Category: Synechococcus elongatus]]		[[Category: Synechococcus elongatus]]
-	[[Category: Beckmann, R.]]	+	[[Category: Beckmann, R]]
-	[[Category: Berninghausen, O.]]	+	[[Category: Berninghausen, O]]
-	[[Category: Bracher, A.]]	+	[[Category: Bracher, A]]
-	[[Category: Hartl, F U.]]	+	[[Category: Hartl, F U]]
-	[[Category: Hayer-Hartl, M.]]	+	[[Category: Hayer-Hartl, M]]
-	[[Category: Liu, C.]]	+	[[Category: Liu, C]]
-	[[Category: Mielke, T.]]	+	[[Category: Mielke, T]]
-	[[Category: Rao, B V.]]	+	[[Category: Rao, B V]]
-	[[Category: Rao, K V.]]	+	[[Category: Rao, K V]]
-	[[Category: Saschenbrecker, S.]]	+	[[Category: Saschenbrecker, S]]
-	[[Category: Starling-Windhof, A.]]	+	[[Category: Starling-Windhof, A]]
-	[[Category: Young, A L.]]	+	[[Category: Young, A L]]
	[[Category: Calvin cycle]]		[[Category: Calvin cycle]]
	[[Category: Carbon dioxide fixation]]		[[Category: Carbon dioxide fixation]]

OCA at 08:30, 29 September 2014

OCA — Mon, 29 Sep 2014 08:30:07 GMT

←Older revision		Revision as of 08:30, 29 September 2014
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-	[[~~Image:~~2wvw.~~png~~\|~~left~~\|200px]]	+	==Cryo-EM structure of the RbcL-RbcX complex==
		+	<StructureSection load='2wvw' size='340' side='right' caption='[[2wvw]], [[Resolution\|resolution]] 9.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca] and [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1rsc\|1rsc]], [[1rbl\|1rbl]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wvw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wvw RCSB], [http://www.ebi.ac.uk/pdbsum/2wvw PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/2wvw_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Form I Rubisco (ribulose 1,5-bisphosphate carboxylase/oxygenase), a complex of eight large (RbcL) and eight small (RbcS) subunits, catalyses the fixation of atmospheric CO(2) in photosynthesis. The limited catalytic efficiency of Rubisco has sparked extensive efforts to re-engineer the enzyme with the goal of enhancing agricultural productivity. To facilitate such efforts we analysed the formation of cyanobacterial form I Rubisco by in vitro reconstitution and cryo-electron microscopy. We show that RbcL subunit folding by the GroEL/GroES chaperonin is tightly coupled with assembly mediated by the chaperone RbcX(2). RbcL monomers remain partially unstable and retain high affinity for GroEL until captured by RbcX(2). As revealed by the structure of a RbcL(8)-(RbcX(2))(8) assembly intermediate, RbcX(2) acts as a molecular staple in stabilizing the RbcL subunits as dimers and facilitates RbcL(8) core assembly. Finally, addition of RbcS results in RbcX(2) release and holoenzyme formation. Specific assembly chaperones may be required more generally in the formation of complex oligomeric structures when folding is closely coupled to assembly.

-	~~{{STRUCTURE_2wvw\| PDB=2wvw \| SCENE= }}~~	+	Coupled chaperone action in folding and assembly of hexadecameric Rubisco.,Liu C, Young AL, Starling-Windhof A, Bracher A, Saschenbrecker S, Rao BV, Rao KV, Berninghausen O, Mielke T, Hartl FU, Beckmann R, Hayer-Hartl M Nature. 2010 Jan 14;463(7278):197-202. PMID:20075914<ref>PMID:20075914</ref>

-	~~===Cryo-EM structure~~ of the ~~RbcL-RbcX complex===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_20075914}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2wvw]] is a 24 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Anabaena_sp~~.~~_ca Anabaena sp. ca] and [http:~~/~~/en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA].~~	+

	==See Also==		==See Also==
	*[[RuBisCO\|RuBisCO]]		*[[RuBisCO\|RuBisCO]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:020075914<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Anabaena sp. ca]]		[[Category: Anabaena sp. ca]]
	[[Category: Ribulose-bisphosphate carboxylase]]		[[Category: Ribulose-bisphosphate carboxylase]]

OCA at 20:53, 20 October 2012

OCA — Sat, 20 Oct 2012 20:53:43 GMT

←Older revision		Revision as of 20:53, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[2wvw]] is a 24 chain structure ~~of [[RuBisCO]]~~ with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca] and [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA].	+	[[2wvw]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_sp._ca Anabaena sp. ca] and [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WVW OCA].

	==See Also==		==See Also==

OCA at 11:57, 27 July 2012

OCA — Fri, 27 Jul 2012 11:57:44 GMT

←Older revision		Revision as of 11:57, 27 July 2012
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	[[Image:2wvw.png\|left\|200px]]		[[Image:2wvw.png\|left\|200px]]

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	===Cryo-EM structure of the RbcL-RbcX complex===		===Cryo-EM structure of the RbcL-RbcX complex===

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