2wzp - Revision history

OCA at 10:20, 20 December 2023

OCA — Wed, 20 Dec 2023 10:20:35 GMT

←Older revision		Revision as of 10:20, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='2wzp' size='340' side='right'caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='2wzp' size='340' side='right'caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bplp2 Bplp2~~] and [https://en.wikipedia.org/wiki/~~Camelus_glama Camelus~~ glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WZP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_virus_P2 Lactococcus virus P2] and [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1zru\|1zru]]~~, [[~~2bsd~~\|~~2bsd~~]]~~, [[2bse\|2bse]]</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.6Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [https://pdbe.org/2wzp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [https://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [https://pdbe.org/2wzp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [https://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/RBP_BPLP2 RBP_BPLP2] Binds to the host phosphopolysaccharides at the onset of infection. Upon activation by calcium, the receptor binding proteins change their conformation, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA ejection.<ref>PMID:20351260</ref> <ref>PMID:24027307</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bplp2~~]]	+	[[Category: Lactococcus virus P2]]
-	[[Category: ~~Camelus~~ glama]]	+	[[Category: Lama glama]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bebeacua, C]]	+	[[Category: Bebeacua C]]
-	[[Category: Bron, P]]	+	[[Category: Bron P]]
-	[[Category: Cambillau, C]]	+	[[Category: Cambillau C]]
-	[[Category: Campanacci, V]]	+	[[Category: Campanacci V]]
-	~~[[Category: Heel, M van~~]]	+	[[Category: Lichiere J]]
-	[[Category: Lichiere, J]]	+	[[Category: Moineau S]]
-	[[Category: Moineau, S]]	+	[[Category: Ortiz-Lombardia M]]
-	[[Category: Ortiz-Lombardia, M]]	+	[[Category: Sciara G]]
-	[[Category: Sciara, G]]	+	[[Category: Tremblay D]]
-	[[Category: Tremblay, D]]	+	[[Category: Van Heel M]]
-	[[Category: ~~Baseplate]]~~	+
-	~~[[Category: Viral protein~~]]	+

OCA at 10:43, 13 April 2022

OCA — Wed, 13 Apr 2022 10:43:15 GMT

←Older revision		Revision as of 10:43, 13 April 2022
Line 3:		Line 3:
	<StructureSection load='2wzp' size='340' side='right'caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='2wzp' size='340' side='right'caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bplp2 Bplp2] and [~~http~~://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2WZP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [https://en.wikipedia.org/wiki/Bplp2 Bplp2] and [https://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [~~http~~://pdbe.org/2wzp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [https://pdbe.org/2wzp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [https://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 15:01, 8 July 2020

OCA — Wed, 08 Jul 2020 15:01:26 GMT

←Older revision		Revision as of 15:01, 8 July 2020
Line 1:		Line 1:

	==Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae==		==Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae==
-	<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>	+	<StructureSection load='2wzp' size='340' side='right'caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Bplp2 Bplp2] and [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2WZP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Bplp2 Bplp2] and [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://pdbe.org/2wzp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://pdbe.org/2wzp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 32:		Line 32:
	[[Category: Bplp2]]		[[Category: Bplp2]]
	[[Category: Camelus glama]]		[[Category: Camelus glama]]
		+	[[Category: Large Structures]]
	[[Category: Bebeacua, C]]		[[Category: Bebeacua, C]]
	[[Category: Bron, P]]		[[Category: Bron, P]]

OCA at 09:10, 3 October 2018

OCA — Wed, 03 Oct 2018 09:10:53 GMT

←Older revision		Revision as of 09:10, 3 October 2018
Line 1:		Line 1:

-	==~~STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE~~==	+	==Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae==
	<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Camelus_glama Camelus glama~~] and [http://en.wikipedia.org/wiki/~~Lactococcus_bacteriophage_p2 Lactococcus bacteriophage p2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Bplp2 Bplp2] and [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://pdbe.org/2wzp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://pdbe.org/2wzp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>
Line 11:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wz/2wzp_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wz/2wzp_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 30:		Line 30:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Bplp2]]
	[[Category: Camelus glama]]		[[Category: Camelus glama]]
-	[[Category: Lactococcus bacteriophage p2]]
	[[Category: Bebeacua, C]]		[[Category: Bebeacua, C]]
	[[Category: Bron, P]]		[[Category: Bron, P]]
	[[Category: Cambillau, C]]		[[Category: Cambillau, C]]
	[[Category: Campanacci, V]]		[[Category: Campanacci, V]]
-	[[Category: Heel, M ~~Van~~]]	+	[[Category: Heel, M van]]
	[[Category: Lichiere, J]]		[[Category: Lichiere, J]]
	[[Category: Moineau, S]]		[[Category: Moineau, S]]

OCA at 11:36, 11 August 2016

OCA — Thu, 11 Aug 2016 11:36:10 GMT

←Older revision		Revision as of 11:36, 11 August 2016
Line 1:		Line 1:
		+
	==STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE==		==STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE==
	<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Lactococcus_phage_p2 Lactococcus phage p2~~] and [http://en.wikipedia.org/wiki/~~Lama_glama Lama glama~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Camelus_glama Camelus glama] and [http://en.wikipedia.org/wiki/Lactococcus_bacteriophage_p2 Lactococcus bacteriophage p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://pdbe.org/2wzp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wzp ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 14:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wzp ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 24:		Line 25:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2wzp" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Lactococcus phage p2~~]]	+	[[Category: Camelus glama]]
-	[[Category: ~~Lama glama~~]]	+	[[Category: Lactococcus bacteriophage p2]]
	[[Category: Bebeacua, C]]		[[Category: Bebeacua, C]]
	[[Category: Bron, P]]		[[Category: Bron, P]]

OCA at 08:57, 20 January 2015

OCA — Tue, 20 Jan 2015 08:57:57 GMT

←Older revision		Revision as of 08:57, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 30:
	[[Category: Lactococcus phage p2]]		[[Category: Lactococcus phage p2]]
	[[Category: Lama glama]]		[[Category: Lama glama]]
-	[[Category: Bebeacua, C.]]	+	[[Category: Bebeacua, C]]
-	[[Category: Bron, P.]]	+	[[Category: Bron, P]]
-	[[Category: Cambillau, C.]]	+	[[Category: Cambillau, C]]
-	[[Category: Campanacci, V.]]	+	[[Category: Campanacci, V]]
-	[[Category: Heel, M Van.]]	+	[[Category: Heel, M Van]]
-	[[Category: Lichiere, J.]]	+	[[Category: Lichiere, J]]
-	[[Category: Moineau, S.]]	+	[[Category: Moineau, S]]
-	[[Category: Ortiz-Lombardia, M.]]	+	[[Category: Ortiz-Lombardia, M]]
-	[[Category: Sciara, G.]]	+	[[Category: Sciara, G]]
-	[[Category: Tremblay, D.]]	+	[[Category: Tremblay, D]]
	[[Category: Baseplate]]		[[Category: Baseplate]]
	[[Category: Viral protein]]		[[Category: Viral protein]]

OCA at 01:51, 1 October 2014

OCA — Wed, 01 Oct 2014 01:51:35 GMT

←Older revision		Revision as of 01:51, 1 October 2014
Line 1:		Line 1:
-	[[~~Image:~~2wzp.~~png~~\|~~left~~\|200px]]	+	==STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE==
		+	<StructureSection load='2wzp' size='340' side='right' caption='[[2wzp]], [[Resolution\|resolution]] 2.60Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WZP FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1zru\|1zru]], [[2bsd\|2bsd]], [[2bse\|2bse]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wzp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wzp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wzp RCSB], [http://www.ebi.ac.uk/pdbsum/2wzp PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wz/2wzp_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Siphoviridae is the most abundant viral family on earth which infects bacteria as well as archaea. All known siphophages infecting gram+ Lactococcus lactis possess a baseplate at the tip of their tail involved in host recognition and attachment. Here, we report analysis of the p2 phage baseplate structure by X-ray crystallography and electron microscopy and propose a mechanism for the baseplate activation during attachment to the host cell. This approximately 1 MDa, Escherichia coli-expressed baseplate is composed of three protein species, including six trimers of the receptor-binding protein (RBP). RBPs host-recognition domains point upwards, towards the capsid, in agreement with the electron-microscopy map of the free virion. In the presence of Ca(2+), a cation mandatory for infection, the RBPs rotated 200 degrees downwards, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA passage. These conformational changes reveal a novel siphophage activation and host-recognition mechanism leading ultimately to DNA ejection.

-	~~{{STRUCTURE_2wzp\| PDB=2wzp \| SCENE= }}~~	+	Structure of lactococcal phage p2 baseplate and its mechanism of activation.,Sciara G, Bebeacua C, Bron P, Tremblay D, Ortiz-Lombardia M, Lichiere J, van Heel M, Campanacci V, Moineau S, Cambillau C Proc Natl Acad Sci U S A. 2010 Mar 29. PMID:20351260<ref>PMID:20351260</ref>

-	~~===STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_20351260}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2wzp]] is~~ a ~~15 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en~~.~~wikipedia.org~~/~~wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:020351260<~~/~~ref~~><~~ref group="xtra">PMID:016327804</ref><references group="xtra"~~/>	+
	[[Category: Lactococcus phage p2]]		[[Category: Lactococcus phage p2]]
	[[Category: Lama glama]]		[[Category: Lama glama]]

OCA at 13:01, 30 January 2013

OCA — Wed, 30 Jan 2013 13:01:59 GMT

←Older revision		Revision as of 13:01, 30 January 2013
Line 1:		Line 1:
	[[Image:2wzp.png\|left\|200px]]		[[Image:2wzp.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2wzp", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2wzp\| PDB=2wzp \| SCENE= }}		{{STRUCTURE_2wzp\| PDB=2wzp \| SCENE= }}

	===STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE===		===STRUCTURES OF LACTOCOCCAL PHAGE P2 BASEPLATE SHED LIGHT ON A NOVEL MECHANISM OF HOST ATTACHMENT AND ACTIVATION IN SIPHOVIRIDAE===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20351260}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20351260 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20351260}}		{{ABSTRACT_PUBMED_20351260}}

Line 22:		Line 11:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20351260~~</ref><ref group="xtra">PMID:~~16327804~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020351260</ref><ref group="xtra">PMID:016327804</ref><references group="xtra"/>
	[[Category: Lactococcus phage p2]]		[[Category: Lactococcus phage p2]]
	[[Category: Lama glama]]		[[Category: Lama glama]]

OCA: Protected "2wzp" [edit=sysop:move=sysop]

OCA — Mon, 14 Mar 2011 19:45:52 GMT

Protected "2wzp" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:45, 14 March 2011

OCA at 19:45, 14 March 2011

OCA — Mon, 14 Mar 2011 19:45:50 GMT

←Older revision		Revision as of 19:45, 14 March 2011
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2wzp.png\|left\|200px]]		[[Image:2wzp.png\|left\|200px]]

Line 20:		Line 19:

	==About this Structure==		==About this Structure==
-	~~2WZP~~ is a 15 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA].	+	[[2wzp]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_phage_p2 Lactococcus phage p2] and [http://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WZP OCA].

	==Reference==		==Reference==
Line 38:		Line 37:
	[[Category: Baseplate]]		[[Category: Baseplate]]
	[[Category: Viral protein]]		[[Category: Viral protein]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 14 08:58:48 2010''