2xon - Revision history

OCA at 10:36, 20 December 2023

OCA — Wed, 20 Dec 2023 10:36:00 GMT

←Older revision		Revision as of 10:36, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='2xon' size='340' side='right'caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2xon' size='340' side='right'caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_43589 Atcc 43589~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=~~SO4~~:~~SULFATE+ION~~'>~~SO4~~</scene>, <scene name='pdbligand=~~GAL~~:~~BETA~~-D-~~GALACTOSE~~'>~~GAL~~</scene><~~/td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.4Å</td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;~~'>~~[[2xom\|2xom]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PRD_900114:4beta-beta-galactotriose'>PRD_900114</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [https://pdbe.org/2xon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [https://www.ebi.ac.uk/pdbsum/2xon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [https://pdbe.org/2xon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [https://www.ebi.ac.uk/pdbsum/2xon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9X0S8_THEMA Q9X0S8_THEMA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 43589]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Boraston~~, A B~~]]	+	[[Category: Thermotoga maritima]]
-	[[Category: Cid, M]]	+	[[Category: Boraston AB]]
-	[[Category: Coutinho~~, P M~~]]	+	[[Category: Cid M]]
-	[[Category: Henrissat, B]]	+	[[Category: Coutinho PM]]
-	[[Category: Kaneko, S]]	+	[[Category: Henrissat B]]
-	[[Category: Lodberg-Pedersen, H]]	+	[[Category: Kaneko S]]
-	[[Category: Willats~~, W G.T]]~~	+	[[Category: Lodberg-Pedersen H]]
-	~~[[Category: Beta-sandwich]]~~	+	[[Category: Willats WGT]]
-	~~[[Category: Carbohydrate-binding module]]~~	+
-	~~[[Category: Galactan]]~~	+
-	~~[[Category: Glycoside hydrolase]]~~	+
-	~~[[Category: Hydrolase~~]]	+

OCA at 12:14, 27 April 2022

OCA — Wed, 27 Apr 2022 12:14:45 GMT

←Older revision		Revision as of 12:14, 27 April 2022
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	<StructureSection load='2xon' size='340' side='right'caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2xon' size='340' side='right'caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2XON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=~~GAL~~:~~BETA-D-GALACTOSE~~'>~~GAL~~</scene>, <scene name='pdbligand=~~SO4~~:~~SULFATE+ION~~'>~~SO4~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2xom\|2xom]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [~~http~~://pdbe.org/2xon PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2xon PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [https://pdbe.org/2xon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [https://www.ebi.ac.uk/pdbsum/2xon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 30:		Line 30:
	==See Also==		==See Also==
	*[[Galactosidase 3D structures\|Galactosidase 3D structures]]		*[[Galactosidase 3D structures\|Galactosidase 3D structures]]
-	*[[Temperature value vs. resolution\|Temperature value vs. resolution]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 12:15, 22 July 2020

OCA — Wed, 22 Jul 2020 12:15:11 GMT

←Older revision		Revision as of 12:15, 22 July 2020
Line 1:		Line 1:

	==Structure of TmCBM61 in complex with beta-1,4-galactotriose at 1.4 A resolution==		==Structure of TmCBM61 in complex with beta-1,4-galactotriose at 1.4 A resolution==
-	<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>	+	<StructureSection load='2xon' size='340' side='right'caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2XON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2XON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://pdbe.org/2xon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://pdbe.org/2xon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 29:		Line 29:

	==See Also==		==See Also==
-	*[[Galactosidase\|Galactosidase]]	+	*[[Galactosidase 3D structures\|Galactosidase 3D structures]]
	*[[Temperature value vs. resolution\|Temperature value vs. resolution]]		*[[Temperature value vs. resolution\|Temperature value vs. resolution]]
	== References ==		== References ==
Line 36:		Line 36:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 43589]]		[[Category: Atcc 43589]]
		+	[[Category: Large Structures]]
	[[Category: Boraston, A B]]		[[Category: Boraston, A B]]
	[[Category: Cid, M]]		[[Category: Cid, M]]

OCA at 09:35, 10 October 2018

OCA — Wed, 10 Oct 2018 09:35:28 GMT

←Older revision		Revision as of 09:35, 10 October 2018
Line 1:		Line 1:

-	==~~STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA~~-1,4-~~GALACTOTRIOSE AT~~ 1.4 A ~~RESOLUTION~~==	+	==Structure of TmCBM61 in complex with beta-1,4-galactotriose at 1.4 A resolution==
	<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XON FirstGlance]. <br>		<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XON FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=~~SO4~~:~~SULFATE+ION~~'>~~SO4~~</scene>, <scene name='pdbligand=~~GAL~~:~~BETA-D-GALACTOSE~~'>~~GAL~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://pdbe.org/2xon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://pdbe.org/2xon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xo/2xon_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xo/2xon_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 05:04, 5 August 2016

OCA — Fri, 05 Aug 2016 05:04:33 GMT

←Older revision		Revision as of 05:04, 5 August 2016
Line 1:		Line 1:
		+
	==STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION==		==STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION==
	<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermotoga_maritima Thermotoga maritima~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XON FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XON FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://pdbe.org/2xon PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xon ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xon ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 25:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2xon" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 33:		Line 35:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Thermotoga maritima~~]]	+	[[Category: Atcc 43589]]
	[[Category: Boraston, A B]]		[[Category: Boraston, A B]]
	[[Category: Cid, M]]		[[Category: Cid, M]]

OCA at 14:11, 17 December 2014

OCA — Wed, 17 Dec 2014 14:11:28 GMT

←Older revision		Revision as of 14:11, 17 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_2xon\| PDB=2xon \| SCENE= }}~~	+	==STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION==
-	===STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION===	+	<StructureSection load='2xon' size='340' side='right' caption='[[2xon]], [[Resolution\|resolution]] 1.40Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20826814}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XON FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2xom\|2xom]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xon OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xon RCSB], [http://www.ebi.ac.uk/pdbsum/2xon PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xo/2xon_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The microbial enzymes that depolymerize plant cell wall polysaccharides, ultimately promoting energy liberation and carbon recycling, are typically complex in their modularity and often contain carbohydrate-binding modules (CBMs). Here, through analysis of an unknown module from a Thermotoga maritima endo-beta-1,4-galactanase, we identify a new family of CBMs that are most frequently found appended to proteins with beta-1,4-galactanase activity. Polysaccharide microarray screening, immunofluorescence microscopy, and biochemical analysis of the isolated module demonstrate the specificity of the module, here called TmCBM61, for beta-1,4-linked galactose-containing ligands, making it the founding member of family CBM61. The ultra-high resolution X-ray crystal structures of TmCBM61 (0.95 and 1.4 A resolution) in complex with beta-1,4-galactotriose reveal the molecular basis of the specificity of the CBM for beta-1,4-galactan. Analysis of these structures provides insight into the recognition of an unexpected helical galactan conformation through a mode of binding that resembles the recognition of starch.

-	~~==About this Structure==~~	+	Recognition of the helical structure of beta-1,4-galactan by a new family of carbohydrate-binding modules.,Cid M, Pedersen HL, Kaneko S, Coutinho PM, Henrissat B, Willats WG, Boraston AB J Biol Chem. 2010 Nov 12;285(46):35999-6009. Epub 2010 Sep 8. PMID:20826814<ref>PMID:20826814</ref>
-	~~[[2xon]] is a 2 chain~~ structure ~~with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thermotoga_maritima Thermotoga maritima]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=2XON OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Galactosidase\|Galactosidase]]		*[[Galactosidase\|Galactosidase]]
	*[[Temperature value vs. resolution\|Temperature value vs. resolution]]		*[[Temperature value vs. resolution\|Temperature value vs. resolution]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:020826814<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Thermotoga maritima]]		[[Category: Thermotoga maritima]]
-	[[Category: Boraston, A B.]]	+	[[Category: Boraston, A B]]
-	[[Category: Cid, M.]]	+	[[Category: Cid, M]]
-	[[Category: Coutinho, P M.]]	+	[[Category: Coutinho, P M]]
-	[[Category: Henrissat, B.]]	+	[[Category: Henrissat, B]]
-	[[Category: Kaneko, S.]]	+	[[Category: Kaneko, S]]
-	[[Category: Lodberg-Pedersen, H.]]	+	[[Category: Lodberg-Pedersen, H]]
-	[[Category: Willats, W G.T.]]	+	[[Category: Willats, W G.T]]
-	[[Category: Beta-sandwich.]]	+	[[Category: Beta-sandwich]]
	[[Category: Carbohydrate-binding module]]		[[Category: Carbohydrate-binding module]]
	[[Category: Galactan]]		[[Category: Galactan]]
	[[Category: Glycoside hydrolase]]		[[Category: Glycoside hydrolase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 10:09, 11 March 2013

OCA — Mon, 11 Mar 2013 10:09:00 GMT

←Older revision		Revision as of 10:09, 11 March 2013
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-	[[Image:2xon.png\|left\|200px]]
-
	{{STRUCTURE_2xon\| PDB=2xon \| SCENE= }}		{{STRUCTURE_2xon\| PDB=2xon \| SCENE= }}
-
	===STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION===		===STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION===
-
	{{ABSTRACT_PUBMED_20826814}}		{{ABSTRACT_PUBMED_20826814}}

OCA at 10:05, 20 October 2012

OCA — Sat, 20 Oct 2012 10:05:35 GMT

←Older revision		Revision as of 10:05, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2xon]] is a 2 chain structure ~~of [[Galactosidase]]~~ with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA].	+	[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA].

	==See Also==		==See Also==

OCA at 00:57, 26 July 2012

OCA — Thu, 26 Jul 2012 00:57:29 GMT

←Older revision		Revision as of 00:57, 26 July 2012
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	[[Image:2xon.png\|left\|200px]]		[[Image:2xon.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2xon", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2xon\| PDB=2xon \| SCENE= }}		{{STRUCTURE_2xon\| PDB=2xon \| SCENE= }}

	===STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION===		===STRUCTURE OF TMCBM61 IN COMPLEX WITH BETA-1,4-GALACTOTRIOSE AT 1.4 A RESOLUTION===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20826814}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20826814 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20826814}}		{{ABSTRACT_PUBMED_20826814}}

	==About this Structure==		==About this Structure==
-	[[2xon]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA].	+	[[2xon]] is a 2 chain structure of [[Galactosidase]] with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XON OCA].
		+
		+	==See Also==
		+	*[[Galactosidase\|Galactosidase]]
		+	*[[Temperature value vs. resolution\|Temperature value vs. resolution]]

	==Reference==		==Reference==
Line 31:		Line 24:
	[[Category: Lodberg-Pedersen, H.]]		[[Category: Lodberg-Pedersen, H.]]
	[[Category: Willats, W G.T.]]		[[Category: Willats, W G.T.]]
		+	[[Category: Beta-sandwich.]]
		+	[[Category: Carbohydrate-binding module]]
		+	[[Category: Galactan]]
		+	[[Category: Glycoside hydrolase]]
		+	[[Category: Hydrolase]]

OCA: Protected "2xon" [edit=sysop:move=sysop]

OCA — Wed, 18 May 2011 05:40:26 GMT

Protected "2xon" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:40, 18 May 2011