2yh6 - Revision history

OCA at 14:04, 1 February 2024

OCA — Thu, 01 Feb 2024 14:04:30 GMT

←Older revision		Revision as of 14:04, 1 February 2024
Line 3:		Line 3:
	<StructureSection load='2yh6' size='340' side='right'caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='2yh6' size='340' side='right'caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecobd Ecobd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_BL21(DE3) Escherichia coli BL21(DE3)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.55Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[2yh5\|2yh5]], [[2yh3\|2yh3]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [https://pdbe.org/2yh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [https://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [https://pdbe.org/2yh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [https://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/BAMC_ECOLI BAMC_ECOLI]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.[HAMAP-Rule:MF_00924]<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>	+	[https://www.uniprot.org/uniprot/BAMC_ECOLI BAMC_ECOLI] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.[HAMAP-Rule:MF_00924]<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Ecobd]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Albrecht, R]]	+	[[Category: Albrecht R]]
-	[[Category: Zeth, K]]	+	[[Category: Zeth K]]
-	~~[[Category: Lipid binding protein~~]]	+

OCA at 12:29, 27 April 2022

OCA — Wed, 27 Apr 2022 12:29:57 GMT

←Older revision		Revision as of 12:29, 27 April 2022
Line 3:		Line 3:
	<StructureSection load='2yh6' size='340' side='right'caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='2yh6' size='340' side='right'caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2yh5\|2yh5]], [[2yh3\|2yh3]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [~~http~~://pdbe.org/2yh6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [https://pdbe.org/2yh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [https://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/BAMC_ECOLI BAMC_ECOLI]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.[HAMAP-Rule:MF_00924]<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>	+	[[https://www.uniprot.org/uniprot/BAMC_ECOLI BAMC_ECOLI]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.[HAMAP-Rule:MF_00924]<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 12:51, 22 July 2020

OCA — Wed, 22 Jul 2020 12:51:00 GMT

←Older revision		Revision as of 12:51, 22 July 2020
Line 1:		Line 1:

	==Structure of the N-terminal domain of BamC from E. coli==		==Structure of the N-terminal domain of BamC from E. coli==
-	<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>	+	<StructureSection load='2yh6' size='340' side='right'caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://pdbe.org/2yh6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://pdbe.org/2yh6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[Bam complex\|Bam complex]]	+	*[[Bam complex 3D structures\|Bam complex 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Ecobd]]		[[Category: Ecobd]]
		+	[[Category: Large Structures]]
	[[Category: Albrecht, R]]		[[Category: Albrecht, R]]
	[[Category: Zeth, K]]		[[Category: Zeth, K]]
	[[Category: Lipid binding protein]]		[[Category: Lipid binding protein]]

OCA at 09:12, 10 October 2018

OCA — Wed, 10 Oct 2018 09:12:53 GMT

←Older revision		Revision as of 09:12, 10 October 2018
Line 1:		Line 1:

-	==~~STRUCTURE OF THE~~ N-~~TERMINAL DOMAIN OF BAMC FROM~~ E. ~~COLI~~==	+	==Structure of the N-terminal domain of BamC from E. coli==
	<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==

OCA at 17:21, 4 August 2016

OCA — Thu, 04 Aug 2016 17:21:46 GMT

←Older revision		Revision as of 17:21, 4 August 2016
Line 1:		Line 1:
		+
	==STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI==		==STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI==
	<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecobd Ecobd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://pdbe.org/2yh6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yh6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~NLPB_ECOLI NLPB_ECOLI~~]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>	+	[[http://www.uniprot.org/uniprot/BAMC_ECOLI BAMC_ECOLI]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.[HAMAP-Rule:MF_00924]<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2yh6" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Bam complex\|Bam complex]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecobd]]
	[[Category: Albrecht, R]]		[[Category: Albrecht, R]]
	[[Category: Zeth, K]]		[[Category: Zeth, K]]
	[[Category: Lipid binding protein]]		[[Category: Lipid binding protein]]

OCA at 17:30, 24 December 2014

OCA — Wed, 24 Dec 2014 17:30:57 GMT

←Older revision		Revision as of 17:30, 24 December 2014
Line 2:		Line 2:
	<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>		<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. <br>	+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YH6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>
-	<tr~~><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class~~='~~plainlinks~~'~~>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum]</span></td></tr>
-	~~<tr~~><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum]</span></td></tr>	+	</table>
-	<table>	+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NLPB_ECOLI NLPB_ECOLI]] Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Nonessential member of the complex that stabilizes the interaction between the essential proteins BamA and BamD.<ref>PMID:20378773</ref> <ref>PMID:21823654</ref> <ref>PMID:22178970</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 14:		Line 15:
	Structural basis of outer membrane protein biogenesis in bacteria.,Albrecht R, Zeth K J Biol Chem. 2011 Aug 5;286(31):27792-803. Epub 2011 May 17. PMID:21586578<ref>PMID:21586578</ref>		Structural basis of outer membrane protein biogenesis in bacteria.,Albrecht R, Zeth K J Biol Chem. 2011 Aug 5;286(31):27792-803. Epub 2011 May 17. PMID:21586578<ref>PMID:21586578</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 21:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Albrecht, R.]]	+	[[Category: Albrecht, R]]
-	[[Category: Zeth, K.]]	+	[[Category: Zeth, K]]
	[[Category: Lipid binding protein]]		[[Category: Lipid binding protein]]

OCA at 07:52, 14 May 2014

OCA — Wed, 14 May 2014 07:52:00 GMT

←Older revision		Revision as of 07:52, 14 May 2014
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-	[[~~Image:~~2yh6.~~png~~\|~~left~~\|~~200px~~]]	+	==STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI==
		+	<StructureSection load='2yh6' size='340' side='right' caption='[[2yh6]], [[Resolution\|resolution]] 1.55Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2yh5\|2yh5]], [[2yh3\|2yh3]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yh6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yh6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yh6 PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In Escherichia coli, a multicomponent BAM (beta-barrel assembly machinery) complex is responsible for recognition and assembly of outer membrane beta-barrel proteins. The functionality of BAM in protein biogenesis is mainly orchestrated through the presence of two essential components, BamA and BamD. Here, we present crystal structures of four lipoproteins (BamB-E). Monomeric BamB and BamD proteins display scaffold architectures typically implied in transient protein interactions. BamB is a beta-propeller protein comprising eight WD40 repeats. BamD shows an elongated fold on the basis of five tetratricopeptide repeats, three of which form the scaffold for protein recognition. The rod-shaped BamC protein has evolved through the gene duplication of two conserved domains known to mediate protein interactions in structurally related complexes. By contrast, the dimeric BamE is formed through a domain swap and indicates fold similarity to the beta-lactamase inhibitor protein family, possibly integrating cell wall stability in BAM function. Structural and biochemical data show evidence for the specific recognition of amphipathic sequences through the tetratricopeptide repeat architecture of BamD. Collectively, our data advance the understanding of the BAM complex and highlight the functional importance of BamD in amphipathic outer membrane beta-barrel protein motif recognition and protein delivery.

-	~~<!--~~	+	Structural basis of outer membrane protein biogenesis in bacteria.,Albrecht R, Zeth K J Biol Chem. 2011 Aug 5;286(31):27792-803. Epub 2011 May 17. PMID:21586578<ref>PMID:21586578</ref>
-	~~The line below this paragraph~~, ~~containing "STRUCTURE_2yh6"~~, ~~creates the "Structure Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display~~.	+
-	-->	+
-	~~{{STRUCTURE_2yh6\| PDB=2yh6 \| SCENE= }}~~	+

-	~~===STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph~~, ~~{{ABSTRACT_PUBMED_21586578}}, adds~~ the ~~Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 21586578 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_21586578}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2yh6]] is a 4 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:021586578<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Albrecht, R.]]		[[Category: Albrecht, R.]]
	[[Category: Zeth, K.]]		[[Category: Zeth, K.]]
	[[Category: Lipid binding protein]]		[[Category: Lipid binding protein]]

OCA at 05:14, 10 August 2011

OCA — Wed, 10 Aug 2011 05:14:48 GMT

←Older revision		Revision as of 05:14, 10 August 2011
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-	[[Image:2yh6.~~jpg~~\|left\|200px]]	+	[[Image:2yh6.png\|left\|200px]]

	<!--		<!--
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	===STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI===		===STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21586578}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21586578 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21586578}}

	==About this Structure==		==About this Structure==
	[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA].		[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021586578</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Albrecht, R.]]		[[Category: Albrecht, R.]]
	[[Category: Zeth, K.]]		[[Category: Zeth, K.]]
		+	[[Category: Lipid binding protein]]

OCA at 05:41, 25 May 2011

OCA — Wed, 25 May 2011 05:41:06 GMT

←Older revision		Revision as of 05:41, 25 May 2011
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-	~~'''Unreleased structure'''~~	+	[[Image:2yh6.jpg\|left\|200px]]

-	The ~~entry 2yh6~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2yh6", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2yh6\| PDB=2yh6 \| SCENE= }}

-	~~Authors: Zeth, K., Albrecht, R~~.	+	===STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI===

-	~~Description:~~ Structure ~~of the N-terminal domain of BamC~~ from E. coli	+
		+	==About this Structure==
		+	[[2yh6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YH6 OCA].
		+	[[Category: Escherichia coli]]
		+	[[Category: Albrecht, R.]]
		+	[[Category: Zeth, K.]]

OCA: Protected "2yh6" [edit=sysop:move=sysop]

OCA — Wed, 04 May 2011 06:20:26 GMT

Protected "2yh6" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:20, 4 May 2011