2ylj - Revision history

OCA at 10:54, 20 December 2023

OCA — Wed, 20 Dec 2023 10:54:52 GMT

←Older revision		Revision as of 10:54, 20 December 2023
Line 3:		Line 3:
	<StructureSection load='2ylj' size='340' side='right'caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>		<StructureSection load='2ylj' size='340' side='right'caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Armru Armru~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>~~, ~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.69Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [https://pdbe.org/2ylj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [https://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [https://pdbe.org/2ylj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [https://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU]] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.	+	[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

	==See Also==		==See Also==
Line 16:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Armru~~]]	+	[[Category: Armoracia rusticana]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Peroxidase]]~~	+	[[Category: Al-Fartusie FS]]
-	[[Category: Al-Fartusie~~, F S~~]]	+	[[Category: Roe SM]]
-	[[Category: Roe~~, S M~~]]	+	[[Category: Smith AT]]
-	[[Category: Smith~~, A T]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 12:32, 27 April 2022

OCA — Wed, 27 Apr 2022 12:32:22 GMT

←Older revision		Revision as of 12:32, 27 April 2022
Line 3:		Line 3:
	<StructureSection load='2ylj' size='340' side='right'caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>		<StructureSection load='2ylj' size='340' side='right'caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [~~http~~://pdbe.org/2ylj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [https://pdbe.org/2ylj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [https://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU]] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.	+	[[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU]] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.

	==See Also==		==See Also==

OCA at 12:56, 22 July 2020

OCA — Wed, 22 Jul 2020 12:56:21 GMT

←Older revision		Revision as of 12:56, 22 July 2020
Line 1:		Line 1:

	==Horse Radish Peroxidase, mutant S167Y==		==Horse Radish Peroxidase, mutant S167Y==
-	<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>	+	<StructureSection load='2ylj' size='340' side='right'caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://pdbe.org/2ylj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://pdbe.org/2ylj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	</StructureSection>		</StructureSection>
	[[Category: Armru]]		[[Category: Armru]]
		+	[[Category: Large Structures]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]
	[[Category: Al-Fartusie, F S]]		[[Category: Al-Fartusie, F S]]

OCA at 20:52, 5 August 2016

OCA — Fri, 05 Aug 2016 20:52:20 GMT

←Older revision		Revision as of 20:52, 5 August 2016
Line 1:		Line 1:
		+
	==Horse Radish Peroxidase, mutant S167Y==		==Horse Radish Peroxidase, mutant S167Y==
	<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>		<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Armoracia_rusticana Armoracia rusticana~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://pdbe.org/2ylj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ylj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:

	==See Also==		==See Also==
-	*[[Cytochrome c\|Cytochrome c]]
	*[[Horseradish peroxidase\|Horseradish peroxidase]]		*[[Horseradish peroxidase\|Horseradish peroxidase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Armoracia rusticana~~]]	+	[[Category: Armru]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]
	[[Category: Al-Fartusie, F S]]		[[Category: Al-Fartusie, F S]]

OCA at 05:47, 25 December 2014

OCA — Thu, 25 Dec 2014 05:47:20 GMT

←Older revision		Revision as of 05:47, 25 December 2014
Line 2:		Line 2:
	<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>		<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. <br>	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YLJ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/~~Glucokinase Glucokinase~~], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1~~.2 2~~.7.1.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU]] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
		+
		+	==See Also==
		+	*[[Cytochrome c\|Cytochrome c]]
		+	*[[Horseradish peroxidase\|Horseradish peroxidase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Armoracia rusticana]]		[[Category: Armoracia rusticana]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]
-	[[Category: Al-Fartusie, F S.]]	+	[[Category: Al-Fartusie, F S]]
-	[[Category: Roe, S M.]]	+	[[Category: Roe, S M]]
-	[[Category: Smith, A T.]]	+	[[Category: Smith, A T]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]

OCA at 07:51, 14 May 2014

OCA — Wed, 14 May 2014 07:51:34 GMT

←Older revision		Revision as of 07:51, 14 May 2014
Line 1:		Line 1:
-	~~[[Image:2ylj.jpg\|left\|200px]]~~	+	==Horse Radish Peroxidase, mutant S167Y==
-		+	<StructureSection load='2ylj' size='340' side='right' caption='[[2ylj]], [[Resolution\|resolution]] 1.69Å' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_2ylj", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1h5g\|1h5g]], [[2atj\|2atj]], [[1h5d\|1h5d]], [[1hch\|1hch]], [[4atj\|4atj]], [[1atj\|1atj]], [[1h5m\|1h5m]], [[1h5f\|1h5f]], [[1w4y\|1w4y]], [[1gx2\|1gx2]], [[1h58\|1h58]], [[1h5k\|1h5k]], [[1w4w\|1w4w]], [[1gwt\|1gwt]], [[1h57\|1h57]], [[1gwu\|1gwu]], [[1h5c\|1h5c]], [[1h5a\|1h5a]], [[1h5j\|1h5j]], [[1h5h\|1h5h]], [[1gwo\|1gwo]], [[1h55\|1h55]], [[1kzm\|1kzm]], [[1gw2\|1gw2]], [[1h5i\|1h5i]], [[7atj\|7atj]], [[1h5l\|1h5l]], [[3atj\|3atj]], [[1h5e\|1h5e]], [[6atj\|6atj]]</td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
-	~~-->~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ylj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ylj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ylj RCSB], [http://www.ebi.ac.uk/pdbsum/2ylj PDBsum]</span></td></tr>
-	~~{{STRUCTURE_2ylj\| PDB=2ylj \| SCENE= }}~~	+	<table>
-		+	__TOC__
-	===Horse Radish Peroxidase, mutant S167Y===	+	</StructureSection>
-		+
-		+
-	==~~About this Structure~~==	+
-	[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA].	+
	[[Category: Armoracia rusticana]]		[[Category: Armoracia rusticana]]
	[[Category: Peroxidase]]		[[Category: Peroxidase]]

OCA at 06:17, 13 June 2012

OCA — Wed, 13 Jun 2012 06:17:13 GMT

←Older revision		Revision as of 06:17, 13 June 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:2ylj.jpg\|left\|200px]]

-	The ~~entry 2ylj~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2ylj", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2ylj\| PDB=2ylj \| SCENE= }}

-	~~Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T.,~~ ,	+	===Horse Radish Peroxidase, mutant S167Y===

-	~~Description~~: ~~Horse Radish~~ Peroxidase, ~~mutant S167Y~~	+
		+	==About this Structure==
		+	[[2ylj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YLJ OCA].
		+	[[Category: Armoracia rusticana]]
		+	[[Category: Peroxidase]]
		+	[[Category: Al-Fartusie, F S.]]
		+	[[Category: Roe, S M.]]
		+	[[Category: Smith, A T.]]
		+	[[Category: Oxidoreductase]]

OCA at 05:42, 15 June 2011

OCA — Wed, 15 Jun 2011 05:42:13 GMT

←Older revision		Revision as of 05:42, 15 June 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 2ylj is ON HOLD	+	The entry 2ylj is ON HOLD until Paper Publication

	Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T., ,		Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T., ,

	Description: Horse Radish Peroxidase, mutant S167Y		Description: Horse Radish Peroxidase, mutant S167Y

OCA: Protected "2ylj" [edit=sysop:move=sysop]

OCA — Wed, 08 Jun 2011 04:41:23 GMT

Protected "2ylj" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:41, 8 June 2011

OCA: New page: '''Unreleased structure''' The entry 2ylj is ON HOLD Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T., , Description: Horse Radish Peroxidase, mutant S167Y

OCA — Wed, 08 Jun 2011 04:41:22 GMT

New page: '''Unreleased structure''' The entry 2ylj is ON HOLD Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T., , Description: Horse Radish Peroxidase, mutant S167Y

New page

'''Unreleased structure'''

The entry 2ylj is ON HOLD

Authors: Roe, S.M., Al-Fartusie, F.S., Smith, A.T., ,

Description: Horse Radish Peroxidase, mutant S167Y