2ysw - Revision history

OCA at 09:05, 25 October 2023

OCA — Wed, 25 Oct 2023 09:05:09 GMT

←Older revision		Revision as of 09:05, 25 October 2023
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	<StructureSection load='2ysw' size='340' side='right'caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='2ysw' size='340' side='right'caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Aquae Aquae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2YSW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YSW FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~>[[2egz\|2egz]]</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.25Å</td></tr>
-	~~<tr~~ id~~='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3~~-~~dehydroquinate_dehydratase 3-dehydroquinate dehydratase]~~, ~~with EC number~~ [~~http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.~~2.~~1.10 4.2.1.10] </span>~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [https://pdbe.org/2ysw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [https://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysw ProSAT], [https://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [~~http~~://pdbe.org/2ysw PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysw ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/AROD_AQUAE AROD_AQUAE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~3-dehydroquinate dehydratase]]~~	+	[[Category: Aquifex aeolicus VF5]]
-	~~[[Category: Aquae~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen, L]]	+	[[Category: Chen L]]
-	[[Category: Chrzas, J]]	+	[[Category: Chrzas J]]
-	[[Category: Ebihara, A]]	+	[[Category: Ebihara A]]
-	[[Category: Fu~~, Z Q~~]]	+	[[Category: Fu ZQ]]
-	[[Category: Kumarevel~~, T S~~]]	+	[[Category: Kumarevel TS]]
-	[[Category: Kuramitsu, S]]	+	[[Category: Kuramitsu S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Tanaka T]]
-	[[Category: Tanaka, T]]	+	[[Category: Wang BC]]
-	[[Category: Wang~~, B C~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: Aquifex aeolicus vf5]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi~~]]	+

OCA at 13:04, 22 July 2020

OCA — Wed, 22 Jul 2020 13:04:34 GMT

←Older revision		Revision as of 13:04, 22 July 2020
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	==Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5==		==Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5==
-	<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>	+	<StructureSection load='2ysw' size='340' side='right'caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YSW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YSW FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://pdbe.org/2ysw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysw ProSAT], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://pdbe.org/2ysw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysw ProSAT], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Dehydroquinase\|Dehydroquinase]]	+	*[[Dehydroquinase 3D structures\|Dehydroquinase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Aquae]]		[[Category: Aquae]]
		+	[[Category: Large Structures]]
	[[Category: Chen, L]]		[[Category: Chen, L]]
	[[Category: Chrzas, J]]		[[Category: Chrzas, J]]

OCA at 09:23, 17 October 2018

OCA — Wed, 17 Oct 2018 09:23:36 GMT

←Older revision		Revision as of 09:23, 17 October 2018
Line 1:		Line 1:
		+
	==Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5==		==Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5==
	<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://pdbe.org/2ysw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://pdbe.org/2ysw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysw ProSAT], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysw_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysw_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 18:52, 8 February 2016

OCA — Mon, 08 Feb 2016 18:52:04 GMT

←Older revision		Revision as of 18:52, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aquifex_aeolicus Aquifex aeolicus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YSW FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YSW FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://pdbe.org/2ysw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ysw ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
-	[[Category: ~~Aquifex aeolicus~~]]	+	[[Category: Aquae]]
	[[Category: Chen, L]]		[[Category: Chen, L]]
	[[Category: Chrzas, J]]		[[Category: Chrzas, J]]

OCA at 09:37, 20 January 2015

OCA — Tue, 20 Jan 2015 09:37:32 GMT

←Older revision		Revision as of 09:37, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YSW FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YSW FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 24:
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
-	[[Category: Chen, L.]]	+	[[Category: Chen, L]]
-	[[Category: Chrzas, J.]]	+	[[Category: Chrzas, J]]
-	[[Category: Ebihara, A.]]	+	[[Category: Ebihara, A]]
-	[[Category: Fu, Z Q.]]	+	[[Category: Fu, Z Q]]
-	[[Category: Kumarevel, T S.]]	+	[[Category: Kumarevel, T S]]
-	[[Category: Kuramitsu, S.]]	+	[[Category: Kuramitsu, S]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Tanaka, T.]]	+	[[Category: Tanaka, T]]
-	[[Category: Wang, B C.]]	+	[[Category: Wang, B C]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: Aquifex aeolicus vf5]]		[[Category: Aquifex aeolicus vf5]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]

OCA at 05:34, 2 October 2014

OCA — Thu, 02 Oct 2014 05:34:57 GMT

←Older revision		Revision as of 05:34, 2 October 2014
Line 1:		Line 1:
-	[[~~Image:~~2ysw.~~png~~\|~~left~~\|200px]]	+	==Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5==
		+	<StructureSection load='2ysw' size='340' side='right' caption='[[2ysw]], [[Resolution\|resolution]] 2.25Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YSW FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2egz\|2egz]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ysw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ysw RCSB], [http://www.ebi.ac.uk/pdbsum/2ysw PDBsum], [http://www.topsan.org/Proteins/RSGI/2ysw TOPSAN]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysw_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_2ysw\| PDB~~=~~2ysw \| SCENE= }}~~	+	==See Also==
-		+	*[[Dehydroquinase\|Dehydroquinase]]
-	~~===Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5~~===	+	__TOC__
-		+	</StructureSection>
-		+
-	~~==About this Structure==~~	+
-	[[~~2ysw~~]] ~~is a 3 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA].~~	+
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]

OCA: Protected "2ysw" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 21:37:57 GMT

Protected "2ysw" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:37, 7 January 2013

OCA at 21:37, 7 January 2013

OCA — Mon, 07 Jan 2013 21:37:52 GMT

←Older revision		Revision as of 21:37, 7 January 2013
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-	{{Seed}}
	[[Image:2ysw.png\|left\|200px]]		[[Image:2ysw.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2ysw\| PDB=2ysw \| SCENE= }}		{{STRUCTURE_2ysw\| PDB=2ysw \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2YSW~~ is a 3 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA].	+	[[2ysw]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA].
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
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	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
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OCA at 14:33, 16 November 2008

OCA — Sun, 16 Nov 2008 14:33:26 GMT

←Older revision		Revision as of 14:33, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2YSW is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA].	+	2YSW is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSW OCA].
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Aquifex aeolicus]]		[[Category: Aquifex aeolicus]]
-	[[Category: Single protein]]
	[[Category: Chen, L.]]		[[Category: Chen, L.]]
	[[Category: Chrzas, J.]]		[[Category: Chrzas, J.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

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OCA at 00:22, 29 September 2008

OCA — Mon, 29 Sep 2008 00:22:00 GMT

←Older revision		Revision as of 00:22, 29 September 2008
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-	[[Image:2ysw.~~jpg~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2ysw.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2ysw\| PDB=2ysw \| SCENE= }}		{{STRUCTURE_2ysw\| PDB=2ysw \| SCENE= }}

-	~~'''~~Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5~~'''~~	+	===Crystal Structure of the 3-dehydroquinate dehydratase from Aquifex aeolicus VF5===


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	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
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