2ywl - Revision history

OCA at 09:08, 25 October 2023

OCA — Wed, 25 Oct 2023 09:08:38 GMT

←Older revision		Revision as of 09:08, 25 October 2023
Line 3:		Line 3:
	<StructureSection load='2ywl' size='340' side='right'caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ywl' size='340' side='right'caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet8 Thet8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=FAD:FLAVIN~~-~~ADENINE+DINUCLEOTIDE'>FAD</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.6Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [https://pdbe.org/2ywl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [https://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywl ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [https://pdbe.org/2ywl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [https://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywl ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5SLC3_THET8 Q5SLC3_THET8]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thet8~~]]	+	[[Category: Thermus thermophilus HB8]]
-	[[Category: Ebihara, A]]	+	[[Category: Ebihara A]]
-	[[Category: Kuramitsu, S]]	+	[[Category: Kuramitsu S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Rossmann fold]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Uncharacterized conserved protein~~]]	+

OCA at 10:41, 8 December 2021

OCA — Wed, 08 Dec 2021 10:41:52 GMT

←Older revision		Revision as of 10:41, 8 December 2021
Line 3:		Line 3:
	<StructureSection load='2ywl' size='340' side='right'caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ywl' size='340' side='right'caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YWL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [~~http~~://pdbe.org/2ywl PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywl ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [https://pdbe.org/2ywl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [https://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywl ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:54, 31 July 2019

OCA — Wed, 31 Jul 2019 07:54:21 GMT

←Older revision		Revision as of 07:54, 31 July 2019
Line 1:		Line 1:

	==Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8==		==Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8==
-	<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='2ywl' size='340' side='right'caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywl_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywl_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thet8]]		[[Category: Thet8]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]

OCA at 09:41, 12 October 2017

OCA — Thu, 12 Oct 2017 09:41:48 GMT

←Older revision		Revision as of 09:41, 12 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8==		==Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8==
	<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://pdbe.org/2ywl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://pdbe.org/2ywl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywl ProSAT], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 11:43, 7 February 2016

OCA — Sun, 07 Feb 2016 11:43:20 GMT

←Older revision		Revision as of 11:43, 7 February 2016
Line 2:		Line 2:
	<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus Thermus thermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://pdbe.org/2ywl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywl ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Thermus thermophilus~~]]	+	[[Category: Thet8]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]
	[[Category: Kuramitsu, S]]		[[Category: Kuramitsu, S]]

OCA at 08:34, 20 January 2015

OCA — Tue, 20 Jan 2015 08:34:27 GMT

←Older revision		Revision as of 08:34, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
-	[[Category: Ebihara, A.]]	+	[[Category: Ebihara, A]]
-	[[Category: Kuramitsu, S.]]	+	[[Category: Kuramitsu, S]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rossmann fold]]		[[Category: Rossmann fold]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]

OCA at 05:09, 2 October 2014

OCA — Thu, 02 Oct 2014 05:09:47 GMT

←Older revision		Revision as of 05:09, 2 October 2014
Line 1:		Line 1:
-	~~[[Image:2ywl.png\|left\|200px]]~~	+	==Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8==
-		+	<StructureSection load='2ywl' size='340' side='right' caption='[[2ywl]], [[Resolution\|resolution]] 1.60Å' scene=''>
-	~~{{STRUCTURE_2ywl\| PDB=2ywl \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YWL FirstGlance]. <br>
-	===Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ywl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ywl RCSB], [http://www.ebi.ac.uk/pdbsum/2ywl PDBsum], [http://www.topsan.org/Proteins/RSGI/2ywl TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywl_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]

OCA: Protected "2ywl" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 21:04:18 GMT

Protected "2ywl" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:04, 7 January 2013

OCA at 21:04, 7 January 2013

OCA — Mon, 07 Jan 2013 21:04:16 GMT

←Older revision		Revision as of 21:04, 7 January 2013
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-	{{Seed}}
	[[Image:2ywl.png\|left\|200px]]		[[Image:2ywl.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2ywl\| PDB=2ywl \| SCENE= }}		{{STRUCTURE_2ywl\| PDB=2ywl \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2YWL~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA].	+	[[2ywl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA].
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:39:39 2008''

OCA at 13:39, 16 November 2008

OCA — Sun, 16 Nov 2008 13:39:41 GMT

←Older revision		Revision as of 13:39, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2YWL is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA].	+	2YWL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWL OCA].
-	~~[[Category: Single protein]]~~	+
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]
Line 30:		Line 29:
	[[Category: Uncharacterized conserved protein]]		[[Category: Uncharacterized conserved protein]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 00~~:38:55 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:39:39 2008''