2zf4 - Revision history

OCA at 13:34, 1 November 2023

OCA — Wed, 01 Nov 2023 13:34:53 GMT

←Older revision		Revision as of 13:34, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='2zf4' size='340' side='right'caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>		<StructureSection load='2zf4' size='340' side='right'caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=PPY:3~~-~~PHENYLPYRUVIC+ACID'>PPY</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.18Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[2zf3\|2zf3]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [https://pdbe.org/2zf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [https://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [https://pdbe.org/2zf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [https://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q7NSZ5_CHRVO Q7NSZ5_CHRVO]
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Violacein and the indolocarbazoles are naturally occurring bisindole products with various biological activities, including antitumor activity. Although these compounds have markedly different molecular skeletons, their biosynthetic pathways share the same intermediate "compound X," which is produced from L-tryptophan via indole-3-pyruvic acid imine. Compound X is a short-lived intermediate that is spontaneously converted to chromopyrrolic acid for indolocarbazole biosynthesis, whereas VioE transforms compound X into protodeoxyviolaceinic acid, which is further modified by other enzymes to produce violacein. Thus, VioE plays a key role in the construction of the molecular skeleton of violacein. Here, we present the crystal structure of VioE, which consists of two subunits, each of which forms a structure resembling a baseball glove. Each subunit has a positively charged pocket at the center of the concave surface of the structure. Mutagenesis analysis of the surface pocket and other surface residues showed that the surface pocket serves as an active site. We have also solved the crystal structure of a complex of VioE and phenylpyruvic acid as an analogue of a VioE-substrate complex. A docking simulation with VioE and the IPA imine dimer, which is proposed to be compound X, agreed with the results from the mutational analysis and the VioE-phenylpyruvic acid complex structure. Based on these results, we propose that VioE traps the highly reactive substrate within the surface pocket to suppress CPA formation and promote protodeoxyviolaceinic acid formation caused by proximity and orientation effects.
		+
		+	Crystal structure of VioE, a key player in the construction of the molecular skeleton of violacein.,Hirano S, Asamizu S, Onaka H, Shiro Y, Nagano S J Biol Chem. 2008 Mar 7;283(10):6459-66. Epub 2008 Jan 1. PMID:18171677<ref>PMID:18171677</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 2zf4" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Chromobacterium violaceum]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hirano, S]]	+	[[Category: Hirano S]]
-	[[Category: Nagano, S]]	+	[[Category: Nagano S]]
-	[[Category: Shiro, Y]]	+	[[Category: Shiro Y]]
-	~~[[Category: Antibiotic]]~~	+
-	~~[[Category: Beta protein]]~~	+
-	~~[[Category: Protein-ligand analogue complex]]~~	+
-	~~[[Category: Putative isomerase~~]]	+

OCA at 13:22, 4 May 2022

OCA — Wed, 04 May 2022 13:22:40 GMT

←Older revision		Revision as of 13:22, 4 May 2022
Line 3:		Line 3:
	<StructureSection load='2zf4' size='340' side='right'caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>		<StructureSection load='2zf4' size='340' side='right'caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2zf3\|2zf3]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [~~http~~://pdbe.org/2zf4 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [https://pdbe.org/2zf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [https://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 12:03, 29 July 2020

OCA — Wed, 29 Jul 2020 12:03:40 GMT

←Older revision		Revision as of 12:03, 29 July 2020
Line 1:		Line 1:

	==Crystal Structure of VioE complexed with phenylpyruvic acid==		==Crystal Structure of VioE complexed with phenylpyruvic acid==
-	<StructureSection load='2zf4' size='340' side='right' caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>	+	<StructureSection load='2zf4' size='340' side='right'caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://pdbe.org/2zf4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://pdbe.org/2zf4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Hirano, S]]		[[Category: Hirano, S]]
	[[Category: Nagano, S]]		[[Category: Nagano, S]]

OCA at 13:58, 11 August 2016

OCA — Thu, 11 Aug 2016 13:58:52 GMT

←Older revision		Revision as of 13:58, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of VioE complexed with phenylpyruvic acid==		==Crystal Structure of VioE complexed with phenylpyruvic acid==
	<StructureSection load='2zf4' size='340' side='right' caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>		<StructureSection load='2zf4' size='340' side='right' caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Chromobacterium_violaceum Chromobacterium violaceum~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://pdbe.org/2zf4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zf4 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Chromobacterium violaceum]]
	[[Category: Hirano, S]]		[[Category: Hirano, S]]
	[[Category: Nagano, S]]		[[Category: Nagano, S]]

OCA at 11:17, 25 January 2015

OCA — Sun, 25 Jan 2015 11:17:25 GMT

←Older revision		Revision as of 11:17, 25 January 2015
Line 10:		Line 10:
	</StructureSection>		</StructureSection>
	[[Category: Chromobacterium violaceum]]		[[Category: Chromobacterium violaceum]]
-	[[Category: Hirano, S.]]	+	[[Category: Hirano, S]]
-	[[Category: Nagano, S.]]	+	[[Category: Nagano, S]]
-	[[Category: Shiro, Y.]]	+	[[Category: Shiro, Y]]
	[[Category: Antibiotic]]		[[Category: Antibiotic]]
	[[Category: Beta protein]]		[[Category: Beta protein]]
	[[Category: Protein-ligand analogue complex]]		[[Category: Protein-ligand analogue complex]]
	[[Category: Putative isomerase]]		[[Category: Putative isomerase]]

OCA at 12:01, 29 October 2014

OCA — Wed, 29 Oct 2014 12:01:18 GMT

←Older revision		Revision as of 12:01, 29 October 2014
Line 1:		Line 1:
-	~~[[Image:2zf4.png\|left\|200px]]~~	+	==Crystal Structure of VioE complexed with phenylpyruvic acid==
-		+	<StructureSection load='2zf4' size='340' side='right' caption='[[2zf4]], [[Resolution\|resolution]] 2.18Å' scene=''>
-	~~{{STRUCTURE_2zf4\| PDB=2zf4 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZF4 FirstGlance]. <br>
-	===Crystal Structure of VioE complexed with phenylpyruvic acid===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zf3\|2zf3]]</td></tr>
-	~~{{ABSTRACT_PUBMED_018171677}}~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum]</span></td></tr>
-		+	</table>
-	==~~About this Structure~~==	+	__TOC__
-	[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA].	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~018171677~~</~~ref~~><~~references group~~="~~xtra~~"/>	+
	[[Category: Chromobacterium violaceum]]		[[Category: Chromobacterium violaceum]]
	[[Category: Hirano, S.]]		[[Category: Hirano, S.]]

OCA: Protected "2zf4" [edit=sysop:move=sysop]

OCA — Wed, 24 Oct 2012 08:00:00 GMT

Protected "2zf4" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:00, 24 October 2012

OCA at 07:59, 24 October 2012

OCA — Wed, 24 Oct 2012 07:59:57 GMT

←Older revision		Revision as of 07:59, 24 October 2012
Line 1:		Line 1:
-	[[Image:2zf4.~~jpg~~\|left\|200px]]	+	[[Image:2zf4.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2zf4", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2zf4\| PDB=2zf4 \| SCENE= }}		{{STRUCTURE_2zf4\| PDB=2zf4 \| SCENE= }}

-	~~'''~~Crystal Structure of VioE complexed with phenylpyruvic acid~~'''~~	+	===Crystal Structure of VioE complexed with phenylpyruvic acid===

		+	{{ABSTRACT_PUBMED_018171677}}

	==About this Structure==		==About this Structure==
-	~~2ZF4 is a~~ [[~~Single protein~~]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA].	+	[[2zf4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZF4 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:018171677</ref><references group="xtra"/>
	[[Category: Chromobacterium violaceum]]		[[Category: Chromobacterium violaceum]]
-	[[Category: Single protein]]
	[[Category: Hirano, S.]]		[[Category: Hirano, S.]]
	[[Category: Nagano, S.]]		[[Category: Nagano, S.]]
Line 23:		Line 20:
	[[Category: Protein-ligand analogue complex]]		[[Category: Protein-ligand analogue complex]]
	[[Category: Putative isomerase]]		[[Category: Putative isomerase]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:11:31 2008''

OCA at 17:11, 4 May 2008

OCA — Sun, 04 May 2008 17:11:33 GMT

←Older revision		Revision as of 17:11, 4 May 2008
Line 1:		Line 1:
	[[Image:2zf4.jpg\|left\|200px]]		[[Image:2zf4.jpg\|left\|200px]]

-	{{Structure	+	<!--
-	\|PDB~~= 2zf4 \|SIZE=350\|CAPTION= <~~scene ~~name='initialview01'>2zf4</scene>~~, ~~resolution 2~~.~~18Å~~	+	The line below this paragraph, containing "STRUCTURE_2zf4", creates the "Structure Box" on the page.
-	~~\|SITE=~~	+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	~~\|LIGAND= <scene name='pdbligand=PPY:3~~-~~PHENYLPYRUVIC+ACID'>PPY</scene~~>	+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	\|~~ACTIVITY~~=	+	or leave the SCENE parameter empty for the default display.
-	\|~~GENE~~=	+	-->
-	~~\|DOMAIN=~~	+	{{STRUCTURE_2zf4\| PDB=2zf4 \| SCENE= }}
-	~~\|RELATEDENTRY=[[2zf3\|2ZF3]]~~	+
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB]</span>	+
-	}}	+

	'''Crystal Structure of VioE complexed with phenylpyruvic acid'''		'''Crystal Structure of VioE complexed with phenylpyruvic acid'''
Line 22:		Line 19:
	[[Category: Nagano, S.]]		[[Category: Nagano, S.]]
	[[Category: Shiro, Y.]]		[[Category: Shiro, Y.]]
-	[[Category: ~~antibiotic~~]]	+	[[Category: Antibiotic]]
-	[[Category: ~~beta~~ protein]]	+	[[Category: Beta protein]]
-	[[Category: ~~protein~~-ligand analogue complex]]	+	[[Category: Protein-ligand analogue complex]]
-	[[Category: ~~putative~~ isomerase]]	+	[[Category: Putative isomerase]]
-		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:11:31 2008''
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Mar 31 05:~~20:45 2008''	+

OCA at 02:20, 31 March 2008

OCA — Mon, 31 Mar 2008 02:20:48 GMT

←Older revision		Revision as of 02:20, 31 March 2008
Line 4:		Line 4:
	\|PDB= 2zf4 \|SIZE=350\|CAPTION= <scene name='initialview01'>2zf4</scene>, resolution 2.18Å		\|PDB= 2zf4 \|SIZE=350\|CAPTION= <scene name='initialview01'>2zf4</scene>, resolution 2.18Å
	\|SITE=		\|SITE=
-	\|LIGAND= <scene name='pdbligand=PPY:3-PHENYLPYRUVIC ACID'>PPY</scene>	+	\|LIGAND= <scene name='pdbligand=PPY:3-PHENYLPYRUVIC+ACID'>PPY</scene>
	\|ACTIVITY=		\|ACTIVITY=
	\|GENE=		\|GENE=
		+	\|DOMAIN=
		+	\|RELATEDENTRY=[[2zf3\|2ZF3]]
		+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zf4 OCA], [http://www.ebi.ac.uk/pdbsum/2zf4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zf4 RCSB]</span>
	}}		}}

Line 19:		Line 22:
	[[Category: Nagano, S.]]		[[Category: Nagano, S.]]
	[[Category: Shiro, Y.]]		[[Category: Shiro, Y.]]
-	[[Category: PPY]]
	[[Category: antibiotic]]		[[Category: antibiotic]]
	[[Category: beta protein]]		[[Category: beta protein]]
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	[[Category: putative isomerase]]		[[Category: putative isomerase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu~~ Mar 20 18:~~54:05~~ 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:20:45 2008''