2zhz - Revision history

OCA at 13:57, 13 March 2024

OCA — Wed, 13 Mar 2024 13:57:43 GMT

←Older revision		Revision as of 13:57, 13 March 2024
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	<StructureSection load='2zhz' size='340' side='right'caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2zhz' size='340' side='right'caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_700388 Atcc 700388~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ATP:ADENOSINE~~-~~5-TRIPHOSPHATE'>ATP</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[2zhy\|2zhy]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~pduO ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=5~~&id=57975 ATCC 700388])</td~~></tr>	+
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>[https://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [https://pdbe.org/2zhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [https://www.ebi.ac.uk/pdbsum/2zhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zhz ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [https://pdbe.org/2zhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [https://www.ebi.ac.uk/pdbsum/2zhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zhz ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q2SZ09_BURTA Q2SZ09_BURTA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Atcc 700388~~]]	+	[[Category: Burkholderia thailandensis]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chi~~, Y M~~]]	+	[[Category: Chi YM]]
-	[[Category: Jang~~, E H~~]]	+	[[Category: Jang EH]]
-	[[Category: Kim~~, H S~~]]	+	[[Category: Kim HS]]
-	[[Category: Moon~~, J H~~]]	+	[[Category: Moon JH]]
-	[[Category: Park~~, A K]]~~	+	[[Category: Park AK]]
-	~~[[Category: Helix bundle]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 17:30, 15 December 2021

OCA — Wed, 15 Dec 2021 17:30:23 GMT

←Older revision		Revision as of 17:30, 15 December 2021
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	==Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis==		==Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis==
-	<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='2zhz' size='340' side='right'caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_700388 Atcc 700388]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_700388 Atcc 700388]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2zhy\|2zhy]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ATCC 700388])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ATCC 700388])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [~~http~~://pdbe.org/2zhz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2zhz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2zhz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [https://pdbe.org/2zhz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [https://www.ebi.ac.uk/pdbsum/2zhz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zhz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zh/2zhz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zh/2zhz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 700388]]		[[Category: Atcc 700388]]
		+	[[Category: Large Structures]]
	[[Category: Chi, Y M]]		[[Category: Chi, Y M]]
	[[Category: Jang, E H]]		[[Category: Jang, E H]]

OCA at 10:58, 12 October 2017

OCA — Thu, 12 Oct 2017 10:58:14 GMT

←Older revision		Revision as of 10:58, 12 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis==		==Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis==
	<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ATCC 700388])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ATCC 700388])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://pdbe.org/2zhz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://pdbe.org/2zhz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zhz ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:46, 9 February 2016

OCA — Tue, 09 Feb 2016 07:46:17 GMT

←Older revision		Revision as of 07:46, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Burkholderia_thailandensis Burkholderia thailandensis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_700388 Atcc 700388]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ~~Burkholderia thailandensis~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 ATCC 700388])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://pdbe.org/2zhz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zhz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burkholderia thailandensis~~]]	+	[[Category: Atcc 700388]]
	[[Category: Chi, Y M]]		[[Category: Chi, Y M]]
	[[Category: Jang, E H]]		[[Category: Jang, E H]]

OCA at 09:16, 20 January 2015

OCA — Tue, 20 Jan 2015 09:16:54 GMT

←Older revision		Revision as of 09:16, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 Burkholderia thailandensis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 Burkholderia thailandensis])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Burkholderia thailandensis]]		[[Category: Burkholderia thailandensis]]
-	[[Category: Chi, Y M.]]	+	[[Category: Chi, Y M]]
-	[[Category: Jang, E H.]]	+	[[Category: Jang, E H]]
-	[[Category: Kim, H S.]]	+	[[Category: Kim, H S]]
-	[[Category: Moon, J H.]]	+	[[Category: Moon, J H]]
-	[[Category: Park, A K.]]	+	[[Category: Park, A K]]
	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 05:26, 2 October 2014

OCA — Thu, 02 Oct 2014 05:26:32 GMT

←Older revision		Revision as of 05:26, 2 October 2014
Line 1:		Line 1:
-	~~[[Image:2zhz.png\|left\|200px]]~~	+	==Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis==
-		+	<StructureSection load='2zhz' size='340' side='right' caption='[[2zhz]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~{{STRUCTURE_2zhz\| PDB=2zhz \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZHZ FirstGlance]. <br>
-	===Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2zhy\|2zhy]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pduO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=57975 Burkholderia thailandensis])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cob(I)yrinic_acid_a,c-diamide_adenosyltransferase Cob(I)yrinic acid a,c-diamide adenosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.17 2.5.1.17] </span></td></tr>
-	[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zhz RCSB], [http://www.ebi.ac.uk/pdbsum/2zhz PDBsum]</span></td></tr>
-		+	<table>
-	==~~Reference~~==	+	== Evolutionary Conservation ==
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~018473361~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zh/2zhz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Burkholderia thailandensis]]		[[Category: Burkholderia thailandensis]]
	[[Category: Chi, Y M.]]		[[Category: Chi, Y M.]]

OCA: Protected "2zhz" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 21:26:39 GMT

Protected "2zhz" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:26, 7 January 2013

OCA at 21:26, 7 January 2013

OCA — Mon, 07 Jan 2013 21:26:36 GMT

←Older revision		Revision as of 21:26, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2zhz.png\|left\|200px]]		[[Image:2zhz.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2zhz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2zhz\| PDB=2zhz \| SCENE= }}		{{STRUCTURE_2zhz\| PDB=2zhz \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2ZHZ~~ is a 3 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].	+	[[2zhz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18473361~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018473361</ref><references group="xtra"/>
	[[Category: Burkholderia thailandensis]]		[[Category: Burkholderia thailandensis]]
	[[Category: Chi, Y M.]]		[[Category: Chi, Y M.]]
Line 26:		Line 19:
	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jan 18 09:12:48 2010''

OCA at 07:12, 18 January 2010

OCA — Mon, 18 Jan 2010 07:12:49 GMT

←Older revision		Revision as of 07:12, 18 January 2010
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	2ZHZ is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].	+	2ZHZ is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].

	==Reference==		==Reference==
-	~~Crystal structure of a PduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis., Moon JH, Park AK, Jang EH, Kim HS, Chi YM, Proteins. 2008 Aug 15;72(3):1066-70.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18473361 18473361]~~	+	<ref group="xtra">PMID:18473361</ref><references group="xtra"/>
	[[Category: Burkholderia thailandensis]]		[[Category: Burkholderia thailandensis]]
-	[[Category: ~~Single protein~~]]	+	[[Category: Chi, Y M.]]
-	[[Category: ~~Pdbx_ordinal=~~, ~~<PDBx~~:~~audit_author~~.]]	+	[[Category: Jang, E H.]]
		+	[[Category: Kim, H S.]]
		+	[[Category: Moon, J H.]]
		+	[[Category: Park, A K.]]
	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Transferase]]		[[Category: Transferase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Mar 25 21~~:02:~~39 2009~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jan 18 09:12:48 2010''

OCA at 19:02, 25 March 2009

OCA — Wed, 25 Mar 2009 19:02:40 GMT

←Older revision		Revision as of 19:02, 25 March 2009
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	2ZHZ is a ~~3 chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].	+	2ZHZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis Burkholderia thailandensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZHZ OCA].

	==Reference==		==Reference==
-	~~<ref group="xtra">~~PMID:~~18473361<~~/~~ref><references group="xtra"~~/>	+	Crystal structure of a PduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis., Moon JH, Park AK, Jang EH, Kim HS, Chi YM, Proteins. 2008 Aug 15;72(3):1066-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18473361 18473361]
	[[Category: Burkholderia thailandensis]]		[[Category: Burkholderia thailandensis]]
-	[[Category: ~~Chi, Y M.~~]]	+	[[Category: Single protein]]
-	[[Category: ~~Jang~~, ~~E H.]]~~	+	[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
-	~~[[Category~~: ~~Kim, H S.]]~~	+
-	~~[[Category: Moon, J H.]]~~	+
-	~~[[Category: Park, A K~~.]]	+
	[[Category: Helix bundle]]		[[Category: Helix bundle]]
	[[Category: Transferase]]		[[Category: Transferase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Feb 17 08~~:05:15 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 21:02:39 2009''