3am1 - Revision history

OCA at 15:48, 4 October 2023

OCA — Wed, 04 Oct 2023 15:48:43 GMT

←Older revision		Revision as of 15:48, 4 October 2023
Line 3:		Line 3:
	<StructureSection load='3am1' size='340' side='right'caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='3am1' size='340' side='right'caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3am1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_43067 Atcc 43067~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3am1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AM1 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ATP:ADENOSINE~~-~~5-TRIPHOSPHATE'>ATP</scene>~~, ~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>pstK, MJ1538 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~2190 ATCC 43067])</td~~><~~/tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [https://pdbe.org/3am1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [https://www.ebi.ac.uk/pdbsum/3am1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3am1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [https://pdbe.org/3am1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [https://www.ebi.ac.uk/pdbsum/3am1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3am1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.	+	[https://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 43067]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Araiso, Y~~]]	+	[[Category: Methanocaldococcus jannaschii]]
-	[[Category: ~~Ishitani, R~~]]	+	[[Category: Araiso Y]]
-	[[Category: ~~Nureki, O~~]]	+	[[Category: Ishitani R]]
-	[[Category: ~~Kinase]]~~	+	[[Category: Nureki O]]
-	~~[[Category: Transferase-rna complex~~]]	+

OCA at 14:57, 29 December 2021

OCA — Wed, 29 Dec 2021 14:57:02 GMT

←Older revision		Revision as of 14:57, 29 December 2021
Line 1:		Line 1:

	==Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)==		==Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)==
-	<StructureSection load='3am1' size='340' side='right' caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='3am1' size='340' side='right'caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3am1]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3AM1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3am1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AM1 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pstK, MJ1538 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pstK, MJ1538 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [~~http~~://pdbe.org/3am1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3am1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3am1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [https://pdbe.org/3am1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [https://www.ebi.ac.uk/pdbsum/3am1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3am1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.	+	[[https://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 43067]]		[[Category: Atcc 43067]]
		+	[[Category: Large Structures]]
	[[Category: Araiso, Y]]		[[Category: Araiso, Y]]
	[[Category: Ishitani, R]]		[[Category: Ishitani, R]]

OCA at 12:32, 4 August 2016

OCA — Thu, 04 Aug 2016 12:32:07 GMT

←Older revision		Revision as of 12:32, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)==		==Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)==
	<StructureSection load='3am1' size='340' side='right' caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='3am1' size='340' side='right' caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>
Line 6:		Line 7:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pstK, MJ1538 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pstK, MJ1538 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [http://www.ebi.ac.uk/pdbsum/3am1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [http://pdbe.org/3am1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [http://www.ebi.ac.uk/pdbsum/3am1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3am1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3am1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:19, 25 December 2014

OCA — Thu, 25 Dec 2014 09:19:40 GMT

←Older revision		Revision as of 09:19, 25 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}~~	+	==Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)==
-	===Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)===	+	<StructureSection load='3am1' size='340' side='right' caption='[[3am1]], [[Resolution\|resolution]] 2.40Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20870747}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3am1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AM1 FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">pstK, MJ1538 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/O-phosphoseryl-tRNA(Sec)_kinase O-phosphoseryl-tRNA(Sec) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.164 2.7.1.164] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3am1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3am1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3am1 RCSB], [http://www.ebi.ac.uk/pdbsum/3am1 PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.		[[http://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	O-Phosphoseryl-tRNA kinase (PSTK) is the key enzyme in recruiting selenocysteine (Sec) to the genetic code of archaea and eukaryotes. The enzyme phosphorylates Ser-tRNA(Sec) to produce O-phosphoseryl-tRNA(Sec) (Sep-tRNA(Sec)) that is then converted to Sec-tRNA(Sec) by Sep-tRNA:Sec-tRNA synthase. Earlier we reported the structure of the Methanocaldococcus jannaschii PSTK (MjPSTK) complexed with AMPPNP. This study presents the crystal structure (at 2.4-A resolution) of MjPSTK complexed with an anticodon-stem/loop truncated tRNA(Sec) (MjtRNA(Sec)), a good enzyme substrate. MjtRNA(Sec) is bound between the enzyme's C-terminal domain (CTD) and N-terminal kinase domain (NTD) that are connected by a flexible 11 amino acid linker. Upon Mj*tRNA(Sec) recognition the CTD undergoes a 62-A movement to allow proper binding of the 7-bp D-stem. This large reorganization of the PSTK quaternary structure likely provides a means by which the unique tRNA(Sec) species can be accurately recognized with high affinity by the translation machinery. However, while the NTD recognizes the tRNA acceptor helix, shortened versions of MjPSTK (representing only 60% of the original size, in which the entire CTD, linker loop and an adjacent NTD helix are missing) are still active in vivo and in vitro, albeit with reduced activity compared to the full-length enzyme.

-	~~==About this Structure==~~	+	C-terminal domain of archaeal O-phosphoseryl-tRNA kinase displays large-scale motion to bind the 7-bp D-stem of archaeal tRNASec.,Sherrer RL, Araiso Y, Aldag C, Ishitani R, Ho JM, Soll D, Nureki O Nucleic Acids Res. 2010 Sep 24. PMID:20870747<ref>PMID:20870747</ref>
-	~~[[3am1]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Atcc_43067 Atcc 43067]~~. ~~Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:020870747</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Atcc 43067]]		[[Category: Atcc 43067]]
-	[[Category: Araiso, Y.]]	+	[[Category: Araiso, Y]]
-	[[Category: Ishitani, R.]]	+	[[Category: Ishitani, R]]
-	[[Category: Nureki, O.]]	+	[[Category: Nureki, O]]
	[[Category: Kinase]]		[[Category: Kinase]]
	[[Category: Transferase-rna complex]]		[[Category: Transferase-rna complex]]

OCA at 06:22, 22 January 2014

OCA — Wed, 22 Jan 2014 06:22:40 GMT

←Older revision		Revision as of 06:22, 22 January 2014
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3am1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Methanocaldococcus_jannaschii Methanocaldococcus jannaschii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA].	+	[[3am1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:020870747</ref><references group="xtra"/><references/>		<ref group="xtra">PMID:020870747</ref><references group="xtra"/><references/>
-	[[Category: ~~Methanocaldococcus jannaschii~~]]	+	[[Category: Atcc 43067]]
	[[Category: Araiso, Y.]]		[[Category: Araiso, Y.]]
	[[Category: Ishitani, R.]]		[[Category: Ishitani, R.]]

OCA at 09:37, 27 March 2013

OCA — Wed, 27 Mar 2013 09:37:56 GMT

←Older revision		Revision as of 09:37, 27 March 2013
Line 1:		Line 1:
-	[[Image:3am1.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3am1", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}		{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}
-
	===Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)===		===Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)===
		+	{{ABSTRACT_PUBMED_20870747}}

-		+	==Function==
-	~~<!--~~	+	[[http://www.uniprot.org/uniprot/PSTK_METJA PSTK_METJA]] Specifically phosphorylates seryl-tRNA(Sec) to O-phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_20870747}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at~~ http://www.~~pubmed~~.~~gov~~), ~~where 20870747 is the PubMed ID number~~.	+
-	~~-->~~	+
-	~~{{ABSTRACT_PUBMED_20870747}}~~	+

	==About this Structure==		==About this Structure==
Line 22:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:020870747</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020870747</ref><references group="xtra"/><references/>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Araiso, Y.]]		[[Category: Araiso, Y.]]
	[[Category: Ishitani, R.]]		[[Category: Ishitani, R.]]
	[[Category: Nureki, O.]]		[[Category: Nureki, O.]]
		+	[[Category: Kinase]]
		+	[[Category: Transferase-rna complex]]

OCA at 06:00, 18 May 2011

OCA — Wed, 18 May 2011 06:00:38 GMT

←Older revision		Revision as of 06:00, 18 May 2011
Line 1:		Line 1:
-	[[Image:3am1.~~jpg~~\|left\|200px]]	+	[[Image:3am1.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 9:
	{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}		{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}

-	===Crystal structure of ~~protein~~===	+	===Crystal structure of O-Phosphoseryl-tRNA kinase complexed with anticodon-stem/loop truncated tRNA(Sec)===


Line 22:		Line 22:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20870747~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020870747</ref><references group="xtra"/>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Araiso, Y.]]		[[Category: Araiso, Y.]]
	[[Category: Ishitani, R.]]		[[Category: Ishitani, R.]]
	[[Category: Nureki, O.]]		[[Category: Nureki, O.]]
-	[[Category: Kinase]]
-	[[Category: Transferase-rna complex]]

OCA: Protected "3am1" [edit=sysop:move=sysop]

OCA — Wed, 29 Dec 2010 18:34:00 GMT

Protected "3am1" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:34, 29 December 2010

OCA at 18:33, 29 December 2010

OCA — Wed, 29 Dec 2010 18:33:57 GMT

←Older revision		Revision as of 18:33, 29 December 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3am1.jpg\|left\|200px]]

-	The ~~entry 3am1~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3am1", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3am1\| PDB=3am1 \| SCENE= }}

-	~~Authors: Araiso, Y., Ishitani, R., Nureki, O.~~	+	===Crystal structure of protein===

-	Description: Crystal structure of protein

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Wed Oct 6 05~~:42:~~46 2010''~~	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20870747}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20870747 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20870747}}
		+
		+	==About this Structure==
		+	[[3am1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AM1 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20870747</ref><references group="xtra"/>
		+	[[Category: Methanocaldococcus jannaschii]]
		+	[[Category: Araiso, Y.]]
		+	[[Category: Ishitani, R.]]
		+	[[Category: Nureki, O.]]
		+	[[Category: Kinase]]
		+	[[Category: Transferase-rna complex]]

OCA at 02:33, 6 October 2010

OCA — Wed, 06 Oct 2010 02:33:15 GMT

←Older revision		Revision as of 02:33, 6 October 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3am1 is ON HOLD	+	The entry 3am1 is ON HOLD until Paper Publication

	Authors: Araiso, Y., Ishitani, R., Nureki, O.		Authors: Araiso, Y., Ishitani, R., Nureki, O.
Line 7:		Line 7:
	Description: Crystal structure of protein		Description: Crystal structure of protein

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Sep~~ ~~1 09~~:30:09 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 6 05:42:46 2010''