3aqm - Revision history

OCA at 14:01, 13 March 2024

OCA — Wed, 13 Mar 2024 14:01:33 GMT

←Older revision		Revision as of 14:01, 13 March 2024
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
	</table>		</table>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	PolyA polymerase (PAP) adds a polyA tail onto the 3'-end of RNAs without a nucleic acid template, using adenosine-5'-triphosphate (ATP) as a substrate. The mechanism for the substrate selection by eubacterial PAP remains obscure. Structural and biochemical studies of Escherichia coli PAP (EcPAP) revealed that the shape and size of the nucleobase-interacting pocket of EcPAP are maintained by an intra-molecular hydrogen-network, making it suitable for the accommodation of only ATP, using a single amino acid, Arg(197). The pocket structure is sustained by interactions between the catalytic domain and the RNA-binding domain. EcPAP has a flexible basic C-terminal region that contributes to optimal RNA translocation for processive adenosine 5'-monophosphate (AMP) incorporations onto the 3'-end of RNAs. A comparison of the EcPAP structure with those of other template-independent RNA polymerases suggests that structural changes of domain(s) outside the conserved catalytic core domain altered the substrate specificities of the template-independent RNA polymerases.
-
-	Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases.,Toh Y, Takeshita D, Nagaike T, Numata T, Tomita K Structure. 2011 Feb 9;19(2):232-43. PMID:21300291<ref>PMID:21300291</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 3aqm" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[Poly(A) polymerase 3D structures\|Poly(A) polymerase 3D structures]]		*[[Poly(A) polymerase 3D structures\|Poly(A) polymerase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 15:52, 4 October 2023

OCA — Wed, 04 Oct 2023 15:52:41 GMT

←Older revision		Revision as of 15:52, 4 October 2023
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	<StructureSection load='3aqm' size='340' side='right'caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>		<StructureSection load='3aqm' size='340' side='right'caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecod1 Ecod1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_DH1 Escherichia coli DH1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQM FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.15Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;'>[[3aqk\|3aqk]]~~, [[~~3aql~~\|~~3aql~~]]~~, [[3aqn\|3aqn]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>EcDH1_3459 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~536056 ECOD1])</td~~><~~/tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
	</table>		</table>
Line 21:		Line 19:

	==See Also==		==See Also==
-	*[[Poly(A) ~~Polymerase~~\|Poly(A) ~~Polymerase~~]]	+	*[[Poly(A) polymerase 3D structures\|Poly(A) polymerase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecod1~~]]	+	[[Category: Escherichia coli DH1]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Polynucleotide adenylyltransferase]]~~	+	[[Category: Takeshita D]]
-	[[Category: Takeshita, D]]	+	[[Category: Toh Y]]
-	[[Category: Toh, Y]]	+	[[Category: Tomita K]]
-	[[Category: Tomita , K]]	+
-	~~[[Category: A-phosphorylation]]~~	+
-	~~[[Category: Atp binding]]~~	+
-	~~[[Category: Atp-binding]]~~	+
-	~~[[Category: Nucleotide-binding]]~~	+
-	~~[[Category: Nucleotidyltransferase]]~~	+
-	~~[[Category: Rna-binding]]~~	+
-	~~[[Category: Transferase]]~~	+
-	~~[[Category: Transferase/rna~~]]	+

OCA at 15:01, 29 December 2021

OCA — Wed, 29 Dec 2021 15:01:21 GMT

←Older revision		Revision as of 15:01, 29 December 2021
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	==Structure of bacterial protein (form II)==		==Structure of bacterial protein (form II)==
-	<StructureSection load='3aqm' size='340' side='right' caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>	+	<StructureSection load='3aqm' size='340' side='right'caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecod1 Ecod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3AQM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecod1 Ecod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AQM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3aqk\|3aqk]], [[3aql\|3aql]], [[3aqn\|3aqn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3aqk\|3aqk]], [[3aql\|3aql]], [[3aqn\|3aqn]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EcDH1_3459 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EcDH1_3459 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [~~http~~://pdbe.org/3aqm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [https://pdbe.org/3aqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [https://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	</StructureSection>		</StructureSection>
	[[Category: Ecod1]]		[[Category: Ecod1]]
		+	[[Category: Large Structures]]
	[[Category: Polynucleotide adenylyltransferase]]		[[Category: Polynucleotide adenylyltransferase]]
	[[Category: Takeshita, D]]		[[Category: Takeshita, D]]

OCA at 09:10, 5 August 2016

OCA — Fri, 05 Aug 2016 09:10:28 GMT

←Older revision		Revision as of 09:10, 5 August 2016
Line 1:		Line 1:
		+
	==Structure of bacterial protein (form II)==		==Structure of bacterial protein (form II)==
	<StructureSection load='3aqm' size='340' side='right' caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>		<StructureSection load='3aqm' size='340' side='right' caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli_dh1 Escherichia coli dh1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AQM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecod1 Ecod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AQM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3aqk\|3aqk]], [[3aql\|3aql]], [[3aqn\|3aqn]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3aqk\|3aqk]], [[3aql\|3aql]], [[3aqn\|3aqn]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EcDH1_3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ~~Escherichia coli DH1~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EcDH1_3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 ECOD1])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [http://www.ebi.ac.uk/pdbsum/3aqm PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [http://pdbe.org/3aqm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [http://www.ebi.ac.uk/pdbsum/3aqm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3aqm ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3aqm" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 24:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli dh1~~]]	+	[[Category: Ecod1]]
	[[Category: Polynucleotide adenylyltransferase]]		[[Category: Polynucleotide adenylyltransferase]]
	[[Category: Takeshita, D]]		[[Category: Takeshita, D]]

OCA at 14:26, 18 December 2014

OCA — Thu, 18 Dec 2014 14:26:47 GMT

←Older revision		Revision as of 14:26, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3aqm~~\| ~~PDB~~=3aqm \| ~~SCENE~~= }}	+	==Structure of bacterial protein (form II)==
-	===~~Structure of bacterial protein~~ (~~form II~~)===	+	<StructureSection load='3aqm' size='340' side='right' caption='[[3aqm]], [[Resolution\|resolution]] 3.15Å' scene=''>
-	~~{{ABSTRACT_PUBMED_21300291}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_dh1 Escherichia coli dh1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AQM FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3aqk\|3aqk]], [[3aql\|3aql]], [[3aqn\|3aqn]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">EcDH1_3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536056 Escherichia coli DH1])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Polynucleotide_adenylyltransferase Polynucleotide adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.19 2.7.7.19] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3aqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aqm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3aqm RCSB], [http://www.ebi.ac.uk/pdbsum/3aqm PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	PolyA polymerase (PAP) adds a polyA tail onto the 3'-end of RNAs without a nucleic acid template, using adenosine-5'-triphosphate (ATP) as a substrate. The mechanism for the substrate selection by eubacterial PAP remains obscure. Structural and biochemical studies of Escherichia coli PAP (EcPAP) revealed that the shape and size of the nucleobase-interacting pocket of EcPAP are maintained by an intra-molecular hydrogen-network, making it suitable for the accommodation of only ATP, using a single amino acid, Arg(197). The pocket structure is sustained by interactions between the catalytic domain and the RNA-binding domain. EcPAP has a flexible basic C-terminal region that contributes to optimal RNA translocation for processive adenosine 5'-monophosphate (AMP) incorporations onto the 3'-end of RNAs. A comparison of the EcPAP structure with those of other template-independent RNA polymerases suggests that structural changes of domain(s) outside the conserved catalytic core domain altered the substrate specificities of the template-independent RNA polymerases.

-	~~==About this~~ Structure==	+	Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases.,Toh Y, Takeshita D, Nagaike T, Numata T, Tomita K Structure. 2011 Feb 9;19(2):232-43. PMID:21300291<ref>PMID:21300291</ref>
-	~~[[3aqm]] is a~~ 2 ~~chain structure with sequence from [http~~:~~//en~~.~~wikipedia.org/wiki/Escherichia_coli_dh1 Escherichia coli dh1]. Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=3AQM OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Poly(A) Polymerase\|Poly(A) Polymerase]]		*[[Poly(A) Polymerase\|Poly(A) Polymerase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:021300291</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli dh1]]		[[Category: Escherichia coli dh1]]
	[[Category: Polynucleotide adenylyltransferase]]		[[Category: Polynucleotide adenylyltransferase]]
-	[[Category: Takeshita, D.]]	+	[[Category: Takeshita, D]]
-	[[Category: Toh, Y.]]	+	[[Category: Toh, Y]]
-	[[Category: Tomita , K.]]	+	[[Category: Tomita , K]]
	[[Category: A-phosphorylation]]		[[Category: A-phosphorylation]]
	[[Category: Atp binding]]		[[Category: Atp binding]]

OCA at 03:48, 1 August 2013

OCA — Thu, 01 Aug 2013 03:48:05 GMT

←Older revision		Revision as of 03:48, 1 August 2013
Line 1:		Line 1:
-	[[Image:3aqm.png\|left\|200px]]
-
	{{STRUCTURE_3aqm\| PDB=3aqm \| SCENE= }}		{{STRUCTURE_3aqm\| PDB=3aqm \| SCENE= }}
-
	===Structure of bacterial protein (form II)===		===Structure of bacterial protein (form II)===
-		+	{{ABSTRACT_PUBMED_21300291}}
-	{{~~ABSTRACT_PUBMED_021300291~~}}	+

	==About this Structure==		==About this Structure==
-	[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli~~ Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].	+	[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_dh1 Escherichia coli dh1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].

	==See Also==		==See Also==
Line 14:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:021300291</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021300291</ref><references group="xtra"/><references/>
-	[[Category: Escherichia coli]]	+	[[Category: Escherichia coli dh1]]
	[[Category: Polynucleotide adenylyltransferase]]		[[Category: Polynucleotide adenylyltransferase]]
	[[Category: Takeshita, D.]]		[[Category: Takeshita, D.]]

OCA at 19:30, 20 October 2012

OCA — Sat, 20 Oct 2012 19:30:14 GMT

←Older revision		Revision as of 19:30, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3aqm]] is a 2 chain structure ~~of [[Poly(A) Polymerase]]~~ with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].	+	[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].

	==See Also==		==See Also==

OCA at 07:34, 27 July 2012

OCA — Fri, 27 Jul 2012 07:34:16 GMT

←Older revision		Revision as of 07:34, 27 July 2012
Line 1:		Line 1:
-	[[Image:3aqm.~~jpg~~\|left\|200px]]	+	[[Image:3aqm.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3aqm", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3aqm\| PDB=3aqm \| SCENE= }}		{{STRUCTURE_3aqm\| PDB=3aqm \| SCENE= }}

	===Structure of bacterial protein (form II)===		===Structure of bacterial protein (form II)===

		+	{{ABSTRACT_PUBMED_021300291}}

	==About this Structure==		==About this Structure==
-	[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].	+	[[3aqm]] is a 2 chain structure of [[Poly(A) Polymerase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].
		+
		+	==See Also==
		+	*[[Poly(A) Polymerase\|Poly(A) Polymerase]]
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021300291</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Polynucleotide adenylyltransferase]]		[[Category: Polynucleotide adenylyltransferase]]
Line 19:		Line 20:
	[[Category: Toh, Y.]]		[[Category: Toh, Y.]]
	[[Category: Tomita , K.]]		[[Category: Tomita , K.]]
		+	[[Category: A-phosphorylation]]
		+	[[Category: Atp binding]]
		+	[[Category: Atp-binding]]
		+	[[Category: Nucleotide-binding]]
		+	[[Category: Nucleotidyltransferase]]
		+	[[Category: Rna-binding]]
		+	[[Category: Transferase]]
		+	[[Category: Transferase/rna]]

OCA at 06:06, 9 February 2011

OCA — Wed, 09 Feb 2011 06:06:42 GMT

←Older revision		Revision as of 06:06, 9 February 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3aqm.jpg\|left\|200px]]

-	The ~~entry 3aqm~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3aqm", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3aqm\| PDB=3aqm \| SCENE= }}

-	~~Authors: Toh, Y., Takeshita, D., Tomita , K.~~	+	===Structure of bacterial protein (form II)===

-	~~Description:~~ Structure ~~of bacterial protein (form II)~~	+
		+	==About this Structure==
		+	[[3aqm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AQM OCA].
		+	[[Category: Escherichia coli]]
		+	[[Category: Polynucleotide adenylyltransferase]]
		+	[[Category: Takeshita, D.]]
		+	[[Category: Toh, Y.]]
		+	[[Category: Tomita , K.]]

OCA: Protected "3aqm" [edit=sysop:move=sysop]

OCA — Wed, 05 Jan 2011 15:48:18 GMT

Protected "3aqm" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:48, 5 January 2011