3bck - Revision history

OCA at 14:43, 1 November 2023

OCA — Wed, 01 Nov 2023 14:43:31 GMT

←Older revision		Revision as of 14:43, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3bck' size='340' side='right'caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='3bck' size='340' side='right'caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus~~ aureus~~" (rosenbach 1884) zopf 1885~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCK FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">AAG41993 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [https://pdbe.org/3bck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [https://www.ebi.ac.uk/pdbsum/3bck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bck ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [https://pdbe.org/3bck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [https://www.ebi.ac.uk/pdbsum/3bck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bck ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9EYL5_STAAU Q9EYL5_STAAU]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 30:

	==See Also==		==See Also==
-	*[[Protein disulfide oxidoreductase\|Protein disulfide oxidoreductase]]	+	*[[Protein disulfide oxidoreductase 3D structures\|Protein disulfide oxidoreductase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Heras, B~~]]	+	[[Category: Staphylococcus aureus]]
-	[[Category: ~~Martin, J L~~]]	+	[[Category: Heras B]]
-	[[Category: ~~Thony-Meyer, L~~]]	+	[[Category: Martin JL]]
-	[[Category: ~~Oxidoreductase]]~~	+	[[Category: Thony-Meyer L]]
-	~~[[Category: Protein folding]]~~	+
-	~~[[Category: Redox active centre]]~~	+
-	~~[[Category: Redox protein]]~~	+
-	~~[[Category: Thiol~~-~~disulfide oxidoreductase~~]]	+

OCA at 07:26, 10 November 2021

OCA — Wed, 10 Nov 2021 07:26:18 GMT

←Older revision		Revision as of 07:26, 10 November 2021
Line 1:		Line 1:

	==Crystal Structure of Staphylococcus aureus DsbA T153V==		==Crystal Structure of Staphylococcus aureus DsbA T153V==
-	<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='3bck' size='340' side='right'caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3BCK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCK FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [~~http~~://pdbe.org/3bck PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3bck PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3bck ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [https://pdbe.org/3bck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [https://www.ebi.ac.uk/pdbsum/3bck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bck ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 34:		Line 34:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Heras, B]]		[[Category: Heras, B]]
	[[Category: Martin, J L]]		[[Category: Martin, J L]]

OCA at 07:59, 31 October 2018

OCA — Wed, 31 Oct 2018 07:59:32 GMT

←Older revision		Revision as of 07:59, 31 October 2018
Line 1:		Line 1:
		+
	==Crystal Structure of Staphylococcus aureus DsbA T153V==		==Crystal Structure of Staphylococcus aureus DsbA T153V==
	<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://pdbe.org/3bck PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://pdbe.org/3bck PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3bck ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bck_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bck_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 23:56, 9 February 2016

OCA — Tue, 09 Feb 2016 23:56:11 GMT

←Older revision		Revision as of 23:56, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Staphylococcus_aureus Staphylococcus~~ aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BCK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BCK FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 ~~Staphylococcus~~ aureus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://pdbe.org/3bck PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bck ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3bck" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Staphylococcus aureus]]
	[[Category: Heras, B]]		[[Category: Heras, B]]
	[[Category: Martin, J L]]		[[Category: Martin, J L]]

OCA at 10:29, 20 January 2015

OCA — Tue, 20 Jan 2015 10:29:00 GMT

←Older revision		Revision as of 10:29, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BCK FirstGlance]. <br>		<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BCK FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
-	[[Category: Heras, B.]]	+	[[Category: Heras, B]]
-	[[Category: Martin, J L.]]	+	[[Category: Martin, J L]]
-	[[Category: Thony-Meyer, L.]]	+	[[Category: Thony-Meyer, L]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: Protein folding]]		[[Category: Protein folding]]

OCA at 09:01, 29 September 2014

OCA — Mon, 29 Sep 2014 09:01:59 GMT

←Older revision		Revision as of 09:01, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~3bck.~~png~~\|~~left~~\|200px]]	+	==Crystal Structure of Staphylococcus aureus DsbA T153V==
		+	<StructureSection load='3bck' size='340' side='right' caption='[[3bck]], [[Resolution\|resolution]] 1.95Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BCK FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3bci\|3bci]], [[3bd2\|3bd2]], [[1dsb\|1dsb]], [[1bed\|1bed]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AAG41993 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3bck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bck OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3bck RCSB], [http://www.ebi.ac.uk/pdbsum/3bck PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bck_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In Gram-negative bacteria, the introduction of disulfide bonds into folding proteins occurs in the periplasm and is catalyzed by donation of an energetically unstable disulfide from DsbA, which is subsequently re-oxidized through interaction with DsbB. Gram-positive bacteria lack a classic periplasm but nonetheless encode Dsb-like proteins. Staphylococcus aureus encodes just one Dsb protein, a DsbA, and no DsbB. Here we report the crystal structure of S. aureus DsbA (SaDsbA), which incorporates a thioredoxin fold with an inserted helical domain, like its Escherichia coli counterpart EcDsbA, but it lacks the characteristic hydrophobic patch and has a truncated binding groove near the active site. These findings suggest that SaDsbA has a different substrate specificity than EcDsbA. Thermodynamic studies indicate that the oxidized and reduced forms of SaDsbA are energetically equivalent, in contrast to the energetically unstable disulfide form of EcDsbA. Further, the partial complementation of EcDsbA by SaDsbA is independent of EcDsbB and biochemical assays show that SaDsbA does not interact with EcDsbB. The identical stabilities of oxidized and reduced SaDsbA may facilitate direct re-oxidation of the protein by extracellular oxidants, without the need for DsbB.

-	~~{{STRUCTURE_3bck\| PDB=3bck \| SCENE= }}~~	+	Staphylococcus aureus DsbA does not have a destabilizing disulfide. A new paradigm for bacterial oxidative folding.,Heras B, Kurz M, Jarrott R, Shouldice SR, Frei P, Robin G, Cemazar M, Thony-Meyer L, Glockshuber R, Martin JL J Biol Chem. 2008 Feb 15;283(7):4261-71. Epub 2007 Dec 12. PMID:18077463<ref>PMID:18077463</ref>

-	~~===Crystal Structure~~ of ~~Staphylococcus aureus DsbA T153V===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18077463}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3bck]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Staphylococcus_aureus Staphylococcus aureus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].~~	+

	==See Also==		==See Also==
	*[[Protein disulfide oxidoreductase\|Protein disulfide oxidoreductase]]		*[[Protein disulfide oxidoreductase\|Protein disulfide oxidoreductase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:018077463<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Heras, B.]]		[[Category: Heras, B.]]

OCA at 15:35, 20 October 2012

OCA — Sat, 20 Oct 2012 15:35:28 GMT

←Older revision		Revision as of 15:35, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3bck]] is a 1 chain structure ~~of [[Protein disulfide oxidoreductase]]~~ with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].	+	[[3bck]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].

	==See Also==		==See Also==

OCA: Protected "3bck" [edit=sysop:move=sysop]

OCA — Thu, 26 Jul 2012 18:52:05 GMT

Protected "3bck" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:52, 26 July 2012

OCA at 18:52, 26 July 2012

OCA — Thu, 26 Jul 2012 18:52:04 GMT

←Older revision		Revision as of 18:52, 26 July 2012
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-	{{Seed}}
	[[Image:3bck.png\|left\|200px]]		[[Image:3bck.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3bck", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_3bck\| PDB=3bck \| SCENE= }}		{{STRUCTURE_3bck\| PDB=3bck \| SCENE= }}

	===Crystal Structure of Staphylococcus aureus DsbA T153V===		===Crystal Structure of Staphylococcus aureus DsbA T153V===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18077463}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 18077463 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_18077463}}		{{ABSTRACT_PUBMED_18077463}}

	==About this Structure==		==About this Structure==
-	~~3BCK~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].	+	[[3bck]] is a 1 chain structure of [[Protein disulfide oxidoreductase]] with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].
		+
		+	==See Also==
		+	*[[Protein disulfide oxidoreductase\|Protein disulfide oxidoreductase]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18077463~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018077463</ref><references group="xtra"/>
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Heras, B.]]		[[Category: Heras, B.]]
	[[Category: Martin, J L.]]		[[Category: Martin, J L.]]
	[[Category: Thony-Meyer, L.]]		[[Category: Thony-Meyer, L.]]
		+	[[Category: Oxidoreductase]]
	[[Category: Protein folding]]		[[Category: Protein folding]]
	[[Category: Redox active centre]]		[[Category: Redox active centre]]
	[[Category: Redox protein]]		[[Category: Redox protein]]
	[[Category: Thiol-disulfide oxidoreductase]]		[[Category: Thiol-disulfide oxidoreductase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:46:09 2009''

OCA at 11:46, 17 February 2009

OCA — Tue, 17 Feb 2009 11:46:10 GMT

←Older revision		Revision as of 11:46, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	3BCK is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].	+	3BCK is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCK OCA].

	==Reference==		==Reference==
-	Staphylococcus aureus DsbA Does Not Have a Destabilizing Disulfide: A NEW PARADIGM FOR BACTERIAL OXIDATIVE FOLDING., Heras B, Kurz M, Jarrott R, Shouldice SR, Frei P, Robin G, Cemazar M, Thony-Meyer L, Glockshuber R, Martin JL, J Biol Chem. 2008 Feb 15;283(7):4261-71. Epub 2007 Dec 12. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18077463 18077463]~~	+	<ref group="xtra">PMID:18077463</ref><references group="xtra"/>
-	~~[[Category: Single protein]]~~	+
	[[Category: Staphylococcus aureus]]		[[Category: Staphylococcus aureus]]
	[[Category: Heras, B.]]		[[Category: Heras, B.]]
Line 34:		Line 33:
	[[Category: Thiol-disulfide oxidoreductase]]		[[Category: Thiol-disulfide oxidoreductase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Jul 28 19~~:01:~~05 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:46:09 2009''