3dbj - Revision history

OCA at 15:06, 1 November 2023

OCA — Wed, 01 Nov 2023 15:06:28 GMT

←Older revision		Revision as of 15:06, 1 November 2023
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	<StructureSection load='3dbj' size='340' side='right'caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='3dbj' size='340' side='right'caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Thermosynechococcus_vulcanus Thermosynechococcus~~ vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermostichus_vulcanus Thermostichus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.9Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [~~http~~://pdbe.org/3dbj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3dbj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [https://pdbe.org/3dbj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [https://www.ebi.ac.uk/pdbsum/3dbj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbj ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B3VNK2_THEVL B3VNK2_THEVL]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thermosynechococcus~~ vulcanus]]	+	[[Category: Thermostichus vulcanus]]
-	[[Category: Adir, N]]	+	[[Category: Adir N]]
-	[[Category: David, L]]	+	[[Category: David L]]
-	[[Category: Klartag, M]]	+	[[Category: Klartag M]]
-	[[Category: McGregor, A]]	+	[[Category: McGregor A]]
-	~~[[Category: Cyanobacteria]]~~	+
-	~~[[Category: Energy transfer]]~~	+
-	~~[[Category: Light harvesting]]~~	+
-	~~[[Category: Photosynthesis]]~~	+
-	~~[[Category: Phycobilisome~~]]	+

OCA at 06:57, 19 August 2020

OCA — Wed, 19 Aug 2020 06:57:31 GMT

←Older revision		Revision as of 06:57, 19 August 2020
Line 1:		Line 1:

	==Allophycocyanin from Thermosynechococcus vulcanus==		==Allophycocyanin from Thermosynechococcus vulcanus==
-	<StructureSection load='3dbj' size='340' side='right' caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>	+	<StructureSection load='3dbj' size='340' side='right'caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://pdbe.org/3dbj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://pdbe.org/3dbj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbj ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 29:		Line 29:

	==See Also==		==See Also==
-	*[[Allophycocyanin\|Allophycocyanin]]	+	*[[Allophycocyanin 3D structures\|Allophycocyanin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thermosynechococcus vulcanus]]		[[Category: Thermosynechococcus vulcanus]]
	[[Category: Adir, N]]		[[Category: Adir, N]]

OCA at 10:00, 14 November 2018

OCA — Wed, 14 Nov 2018 10:00:22 GMT

←Older revision		Revision as of 10:00, 14 November 2018
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbj_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbj_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 16:41, 11 August 2016

OCA — Thu, 11 Aug 2016 16:41:44 GMT

←Older revision		Revision as of 16:41, 11 August 2016
Line 1:		Line 1:
		+
	==Allophycocyanin from Thermosynechococcus vulcanus==		==Allophycocyanin from Thermosynechococcus vulcanus==
	<StructureSection load='3dbj' size='340' side='right' caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>		<StructureSection load='3dbj' size='340' side='right' caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://pdbe.org/3dbj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbj ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dbj ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 25:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3dbj" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 10:54, 20 January 2015

OCA — Tue, 20 Jan 2015 10:54:13 GMT

←Older revision		Revision as of 10:54, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>		<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Thermosynechococcus vulcanus]]		[[Category: Thermosynechococcus vulcanus]]
-	[[Category: Adir, N.]]	+	[[Category: Adir, N]]
-	[[Category: David, L.]]	+	[[Category: David, L]]
-	[[Category: Klartag, M.]]	+	[[Category: Klartag, M]]
-	[[Category: McGregor, A.]]	+	[[Category: McGregor, A]]
	[[Category: Cyanobacteria]]		[[Category: Cyanobacteria]]
	[[Category: Energy transfer]]		[[Category: Energy transfer]]

OCA at 09:19, 29 September 2014

OCA — Mon, 29 Sep 2014 09:19:08 GMT

←Older revision		Revision as of 09:19, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~3dbj.~~png~~\|~~left~~\|200px]]	+	==Allophycocyanin from Thermosynechococcus vulcanus==
		+	<StructureSection load='3dbj' size='340' side='right' caption='[[3dbj]], [[Resolution\|resolution]] 2.90Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DBJ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dbj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dbj RCSB], [http://www.ebi.ac.uk/pdbsum/3dbj PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3dbj_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Allophycocyanin (APC) is the primary pigment-protein component of the cores of the phycobilisome antenna complex. In addition to an extremely high degree of amino acid sequence conservation, the overall structures of APC from both mesophilic and thermophilic species are almost identical at all levels of assembly, yet APC from thermophilic organisms should have structural attributes that prevent thermally induced denaturation. We determined the structure of APC from the thermophilic cyanobacterium Thermosynechococcus vulcanus to 2.9 A, reaffirming the conservation of structural similarity with APC from mesophiles. We provide spectroscopic evidence that T. vulcanus APC is indeed more stable at elevated temperatures in vitro, when compared with the APC from mesophilic species. APC thermal and chemical stability levels are further enhanced when monitored in the presence of high concentrations of buffered phosphate, which increases the strength of hydrophobic interactions, and may mimic the effect of cytosolic crowding. Absorption spectroscopy, size-exclusion HPLC, and native gel electrophoresis also show that the thermally or chemically induced changes in the APC absorption spectra that result in the loss of the prominent 652-nm band in trimeric APC are not a result of physical monomerization. We propose that the bathochromic shift that occurs in APC upon trimerization is due to the coupling of the hydrophobicity of the alpha84 phycocyanobilin cofactor environment created by a deep cleft formed by the beta subunit with highly charged flanking regions. This arrangement also provides the additional stability required by thermophiles at elevated temperatures. The chemical environment that induces the bathochromic shift in APC trimers is different from the source of shifts in the absorption of monomers of the terminal energy acceptors APC(B) and L(CM), as visualized by the building of molecular models.

-	~~{{STRUCTURE_3dbj\| PDB=3dbj \| SCENE= }}~~	+	Allophycocyanin trimer stability and functionality are primarily due to polar enhanced hydrophobicity of the phycocyanobilin binding pocket.,McGregor A, Klartag M, David L, Adir N J Mol Biol. 2008 Dec 12;384(2):406-21. Epub 2008 Sep 16. PMID:18823993<ref>PMID:18823993</ref>

-	~~===Allophycocyanin from Thermosynechococcus vulcanus===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18823993}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3dbj]] is~~ a ~~8 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA].~~	+

	==See Also==		==See Also==
	*[[Allophycocyanin\|Allophycocyanin]]		*[[Allophycocyanin\|Allophycocyanin]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:018823993<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Thermosynechococcus vulcanus]]		[[Category: Thermosynechococcus vulcanus]]
	[[Category: Adir, N.]]		[[Category: Adir, N.]]

OCA at 21:04, 20 October 2012

OCA — Sat, 20 Oct 2012 21:04:36 GMT

←Older revision		Revision as of 21:04, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3dbj]] is a 8 chain structure ~~of [[Allophycocyanin]]~~ with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA].	+	[[3dbj]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA].

	==See Also==		==See Also==

OCA: Protected "3dbj" [edit=sysop:move=sysop]

OCA — Fri, 27 Jul 2012 12:31:17 GMT

Protected "3dbj" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:31, 27 July 2012

OCA at 12:31, 27 July 2012

OCA — Fri, 27 Jul 2012 12:31:16 GMT

←Older revision		Revision as of 12:31, 27 July 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:3dbj.png\|left\|200px]]		[[Image:3dbj.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3dbj", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3dbj\| PDB=3dbj \| SCENE= }}		{{STRUCTURE_3dbj\| PDB=3dbj \| SCENE= }}

	===Allophycocyanin from Thermosynechococcus vulcanus===		===Allophycocyanin from Thermosynechococcus vulcanus===

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	{{ABSTRACT_PUBMED_18823993}}		{{ABSTRACT_PUBMED_18823993}}

	==About this Structure==		==About this Structure==
-	~~3DBJ~~ is a 8 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA].	+	[[3dbj]] is a 8 chain structure of [[Allophycocyanin]] with sequence from [http://en.wikipedia.org/wiki/Thermosynechococcus_vulcanus Thermosynechococcus vulcanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBJ OCA].
		+
		+	==See Also==
		+	*[[Allophycocyanin\|Allophycocyanin]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18823993~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018823993</ref><references group="xtra"/>
	[[Category: Thermosynechococcus vulcanus]]		[[Category: Thermosynechococcus vulcanus]]
	[[Category: Adir, N.]]		[[Category: Adir, N.]]
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	[[Category: Photosynthesis]]		[[Category: Photosynthesis]]
	[[Category: Phycobilisome]]		[[Category: Phycobilisome]]
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	==Reference==		==Reference==
-	Allophycocyanin trimer stability and functionality are primarily due to polar enhanced hydrophobicity of the phycocyanobilin binding pocket., McGregor A, Klartag M, David L, Adir N, J Mol Biol. 2008 Dec 12;384(2):406-21. Epub 2008 Sep 16. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18823993 18823993]~~	+	<ref group="xtra">PMID:18823993</ref><references group="xtra"/>
	[[Category: Thermosynechococcus vulcanus]]		[[Category: Thermosynechococcus vulcanus]]
	[[Category: Adir, N.]]		[[Category: Adir, N.]]
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	[[Category: Phycobilisome]]		[[Category: Phycobilisome]]

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