3df3 - Revision history

OCA: Redirecting to 4v64

OCA — Wed, 10 Dec 2014 15:20:57 GMT

Redirecting to 4v64

←Older revision		Revision as of 15:20, 10 December 2014
Line 1:		Line 1:
-	==Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.==	+	#REDIRECT [[4v64]] This PDB entry is obsolete and replaced by 4v64
-	~~<StructureSection load='3df3' size='340' side='right' caption='~~[[~~3df3]], [[Resolution\|resolution]] 3.50Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[3df3~~]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DF3 FirstGlance]. <br>	+
-	~~</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HYG:HYGROMYCIN+B'>HYG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>~~	+
-	~~<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3df1\|3df1]], [[3df2\|3df2]], [[3df4\|3df4]]</td></tr>~~	+
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3df3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3df3 RCSB], [http://www.ebi.ac.uk/pdbsum/3df3 PDBsum]</span></td></tr>	+
-	~~<table>~~	+
-	~~== Evolutionary Conservation ==~~	+
-	~~[[Image:Consurf_key_small.gif\|200px\|right]]~~	+
-	~~Check<jmol>~~	+
-	~~<jmolCheckbox>~~	+
-	~~<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3df3_consurf.spt"</scriptWhenChecked>~~	+
-	~~<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>~~	+
-	~~<text>to colour the structure by Evolutionary Conservation</text>~~	+
-	~~</jmolCheckbox>~~	+
-	~~</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method~~ and ~~the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].~~	+
-	~~<div style="clear:both"></div>~~	+
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	Aminoglycosides are one of the most widely used and clinically important classes of antibiotics that target the ribosome. Hygromycin B is an atypical aminoglycoside antibiotic with unique structural and functional properties. Here we describe the structure of the intact Escherichia coli 70S ribosome in complex with hygromycin B. The antibiotic binds to the mRNA decoding center in the small (30S) ribosomal subunit of the 70S ribosome and induces a localized conformational change, in contrast to its effects observed in the structure of the isolated 30S ribosomal subunit in complex with the drug. The conformational change in the ribosome caused by hygromycin B binding differs from that induced by other aminoglycosides. Also, in contrast to other aminoglycosides, hygromycin B potently inhibits spontaneous reverse translocation of tRNAs and mRNA on the ribosome in vitro. These structural and biochemical results help to explain the unique mode of translation inhibition by hygromycin B.	+
-		+
-	~~Structural basis for hygromycin B inhibition of protein biosynthesis.,Borovinskaya MA, Shoji S, Fredrick K, Cate JH RNA. 2008 Aug;14(8):1590-9. Epub 2008 Jun 20. PMID:18567815<ref>PMID:18567815</ref>~~	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-		+
-	~~==See Also==~~	+
-	*[[Ribosome 3D structures\|Ribosome 3D structures]]	+
-	~~== References ==~~	+
-	~~<references/>~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Escherichia coli]]~~	+
-	~~[[Category: Borovinskaya, M A.]]~~	+
-	~~[[Category: Cate, J H.D.]]~~	+
-	~~[[Category: Fredrick, K.]]~~	+
-	~~[[Category: Shoji, S.]]~~	+
-	~~[[Category: Ribosome]]~~	+
-	~~[[Category: Rna-protein complex]]~~	+

OCA at 12:30, 29 September 2014

OCA — Mon, 29 Sep 2014 12:30:39 GMT

←Older revision		Revision as of 12:30, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~3df3.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.==
		+	<StructureSection load='3df3' size='340' side='right' caption='[[3df3]], [[Resolution\|resolution]] 3.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3df3]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DF3 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HYG:HYGROMYCIN+B'>HYG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3df1\|3df1]], [[3df2\|3df2]], [[3df4\|3df4]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3df3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3df3 RCSB], [http://www.ebi.ac.uk/pdbsum/3df3 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3df3_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Aminoglycosides are one of the most widely used and clinically important classes of antibiotics that target the ribosome. Hygromycin B is an atypical aminoglycoside antibiotic with unique structural and functional properties. Here we describe the structure of the intact Escherichia coli 70S ribosome in complex with hygromycin B. The antibiotic binds to the mRNA decoding center in the small (30S) ribosomal subunit of the 70S ribosome and induces a localized conformational change, in contrast to its effects observed in the structure of the isolated 30S ribosomal subunit in complex with the drug. The conformational change in the ribosome caused by hygromycin B binding differs from that induced by other aminoglycosides. Also, in contrast to other aminoglycosides, hygromycin B potently inhibits spontaneous reverse translocation of tRNAs and mRNA on the ribosome in vitro. These structural and biochemical results help to explain the unique mode of translation inhibition by hygromycin B.

-	~~{{STRUCTURE_3df3\| PDB=3df3 \| SCENE= }}~~	+	Structural basis for hygromycin B inhibition of protein biosynthesis.,Borovinskaya MA, Shoji S, Fredrick K, Cate JH RNA. 2008 Aug;14(8):1590-9. Epub 2008 Jun 20. PMID:18567815<ref>PMID:18567815</ref>

-	~~===Crystal structure~~ of the ~~bacterial ribosome from Escherichia coli in complex with hygromycin B~~. ~~This file contains the 30S subunit~~ of ~~the second 70S ribosome, with hygromycin B bound~~. ~~The entire crystal structure contains two 70S ribosomes.===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18567815}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3df3]] is a 21 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].~~	+

	==See Also==		==See Also==
-	*[[Ribosomal protein S10\|Ribosomal protein S10]]	+	*[[Ribosome 3D structures\|Ribosome 3D structures]]
-	*[[Ribosomal protein S11\|Ribosomal protein S11]]	+	== References ==
-	*[[Ribosomal protein S12\|Ribosomal protein S12]]	+	<references/>
-	*[[Ribosomal protein S13\|Ribosomal protein S13]]	+	__TOC__
-	*[[Ribosomal protein S14\|Ribosomal protein S14]]	+	</StructureSection>
-	*[[Ribosomal protein S15\|Ribosomal protein S15]]	+
-	*[[Ribosomal protein S16\|Ribosomal protein S16]]	+
-	*[[Ribosomal protein S17\|Ribosomal protein S17]]	+
-	*[[Ribosomal protein S18\|Ribosomal protein S18]]	+
-	*[[Ribosomal protein S19\|Ribosomal protein S19]]	+
-	*[[Ribosomal protein S2\|Ribosomal protein S2]]	+
-	*[[Ribosomal protein S20\|Ribosomal protein S20]]	+
-	*[[Ribosomal protein S21\|Ribosomal protein S21]]	+
-	*[[Ribosomal protein S3\|Ribosomal protein S3]]	+
-	*[[Ribosomal protein S4\|Ribosomal protein S4]]	+
-	*[[Ribosomal protein S5\|Ribosomal protein S5]]	+
-	*[[Ribosomal protein S6\|Ribosomal protein S6]]	+
-	*[[Ribosomal protein S7\|Ribosomal protein S7]]	+
-	*[[Ribosomal protein S8\|Ribosomal protein S8]]	+
-	*[[Ribosomal protein S9\|Ribosomal protein S9]]	+
-	*[[Ribosome\|Ribosome]]	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:018567815<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Borovinskaya, M A.]]		[[Category: Borovinskaya, M A.]]

OCA at 18:51, 20 October 2012

OCA — Sat, 20 Oct 2012 18:51:00 GMT

←Older revision		Revision as of 18:51, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3df3]] is a 21 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S21]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].	+	[[3df3]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].

	==See Also==		==See Also==

OCA at 05:28, 27 July 2012

OCA — Fri, 27 Jul 2012 05:28:14 GMT

←Older revision		Revision as of 05:28, 27 July 2012
Line 1:		Line 1:
	[[Image:3df3.png\|left\|200px]]		[[Image:3df3.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3df3", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3df3\| PDB=3df3 \| SCENE= }}		{{STRUCTURE_3df3\| PDB=3df3 \| SCENE= }}

	===Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.===		===Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18567815}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 18567815 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_18567815}}		{{ABSTRACT_PUBMED_18567815}}

	==About this Structure==		==About this Structure==
-	[[3df3]] is a 21 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S21]], [[Ribosomal protein S3]], [[Ribosomal protein S4]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].	+	[[3df3]] is a 21 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S14]], [[Ribosomal protein S15]], [[Ribosomal protein S16]], [[Ribosomal protein S17]], [[Ribosomal protein S18]], [[Ribosomal protein S19]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S21]], [[Ribosomal protein S3]], [[Ribosomal protein S4]], [[Ribosomal protein S5]], [[Ribosomal protein S6]], [[Ribosomal protein S7]], [[Ribosomal protein S8]], [[Ribosomal protein S9]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].

	==See Also==		==See Also==
-	*[[Ribosomal protein S10]]	+	*[[Ribosomal protein S10\|Ribosomal protein S10]]
-	*[[Ribosomal protein S11]]	+	*[[Ribosomal protein S11\|Ribosomal protein S11]]
-	*[[Ribosomal protein S12]]	+	*[[Ribosomal protein S12\|Ribosomal protein S12]]
-	*[[Ribosomal protein S13]]	+	*[[Ribosomal protein S13\|Ribosomal protein S13]]
-	*[[Ribosomal protein S15]]	+	*[[Ribosomal protein S14\|Ribosomal protein S14]]
-	*[[Ribosomal protein S17]]	+	*[[Ribosomal protein S15\|Ribosomal protein S15]]
-	*[[Ribosomal protein S2]]	+	*[[Ribosomal protein S16\|Ribosomal protein S16]]
-	*[[Ribosomal protein S20]]	+	*[[Ribosomal protein S17\|Ribosomal protein S17]]
-	*[[Ribosomal protein S21]]	+	*[[Ribosomal protein S18\|Ribosomal protein S18]]
-	*[[Ribosomal protein S3]]	+	*[[Ribosomal protein S19\|Ribosomal protein S19]]
-	*[[Ribosomal protein S4]]	+	*[[Ribosomal protein S2\|Ribosomal protein S2]]
-	*[[Ribosome]]	+	*[[Ribosomal protein S20\|Ribosomal protein S20]]
		+	*[[Ribosomal protein S21\|Ribosomal protein S21]]
		+	*[[Ribosomal protein S3\|Ribosomal protein S3]]
		+	*[[Ribosomal protein S4\|Ribosomal protein S4]]
		+	*[[Ribosomal protein S5\|Ribosomal protein S5]]
		+	*[[Ribosomal protein S6\|Ribosomal protein S6]]
		+	*[[Ribosomal protein S7\|Ribosomal protein S7]]
		+	*[[Ribosomal protein S8\|Ribosomal protein S8]]
		+	*[[Ribosomal protein S9\|Ribosomal protein S9]]
		+	*[[Ribosome\|Ribosome]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18567815~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018567815</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Borovinskaya, M A.]]		[[Category: Borovinskaya, M A.]]

OCA: Protected "3df3" [edit=sysop:move=sysop]

OCA — Sun, 26 Dec 2010 21:46:10 GMT

Protected "3df3" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:46, 26 December 2010

OCA at 21:46, 26 December 2010

OCA — Sun, 26 Dec 2010 21:46:08 GMT

←Older revision		Revision as of 21:46, 26 December 2010
Line 1:		Line 1:
-	{{Seed}}
	[[Image:3df3.png\|left\|200px]]		[[Image:3df3.png\|left\|200px]]

Line 20:		Line 19:

	==About this Structure==		==About this Structure==
-	~~3DF3~~ is a 21 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].	+	[[3df3]] is a 21 chain structure of [[Ribosomal protein S10]], [[Ribosomal protein S11]], [[Ribosomal protein S12]], [[Ribosomal protein S13]], [[Ribosomal protein S15]], [[Ribosomal protein S17]], [[Ribosomal protein S2]], [[Ribosomal protein S20]], [[Ribosomal protein S21]], [[Ribosomal protein S3]], [[Ribosomal protein S4]] and [[Ribosome]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].
		+
		+	==See Also==
		+	*[[Ribosomal protein S10]]
		+	*[[Ribosomal protein S11]]
		+	*[[Ribosomal protein S12]]
		+	*[[Ribosomal protein S13]]
		+	*[[Ribosomal protein S15]]
		+	*[[Ribosomal protein S17]]
		+	*[[Ribosomal protein S2]]
		+	*[[Ribosomal protein S20]]
		+	*[[Ribosomal protein S21]]
		+	*[[Ribosomal protein S3]]
		+	*[[Ribosomal protein S4]]
		+	*[[Ribosome]]

	==Reference==		==Reference==
Line 31:		Line 44:
	[[Category: Ribosome]]		[[Category: Ribosome]]
	[[Category: Rna-protein complex]]		[[Category: Rna-protein complex]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:37:40 2009''

OCA at 19:37, 17 February 2009

OCA — Tue, 17 Feb 2009 19:37:41 GMT

←Older revision		Revision as of 19:37, 17 February 2009
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3df3.~~jpg~~\|left\|200px]]	+	[[Image:3df3.png\|left\|200px]]

	<!--		<!--
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	3DF3 is a ~~[[Protein complex]]~~ structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].	+	3DF3 is a 21 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].

	==Reference==		==Reference==
-	~~Structural basis for hygromycin B inhibition of protein biosynthesis., Borovinskaya MA, Shoji S, Fredrick K, Cate JH, RNA. 2008 Aug;14(8):1590-9. Epub 2008 Jun 20.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18567815 18567815]~~	+	<ref group="xtra">PMID:18567815</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Protein complex]]
	[[Category: Borovinskaya, M A.]]		[[Category: Borovinskaya, M A.]]
	[[Category: Cate, J H.D.]]		[[Category: Cate, J H.D.]]
Line 33:		Line 32:
	[[Category: Rna-protein complex]]		[[Category: Rna-protein complex]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Aug 20 12~~:06:~~08 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 21:37:40 2009''

OCA at 09:06, 20 August 2008

OCA — Wed, 20 Aug 2008 09:06:09 GMT

←Older revision		Revision as of 09:06, 20 August 2008
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3df3.jpg\|left\|200px]]

-	The ~~entry 3df3~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3df3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3df3\| PDB=3df3 \| SCENE= }}

-	~~Authors: Borovinskaya, M.A~~., ~~Shoji, S., Fredrick, K., Cate, J.H~~.D.	+	===Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.===

-	Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug ~~13 13~~:40:22 2008''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_18567815}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 18567815 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_18567815}}
		+
		+	==About this Structure==
		+	3DF3 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF3 OCA].
		+
		+	==Reference==
		+	Structural basis for hygromycin B inhibition of protein biosynthesis., Borovinskaya MA, Shoji S, Fredrick K, Cate JH, RNA. 2008 Aug;14(8):1590-9. Epub 2008 Jun 20. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18567815 18567815]
		+	[[Category: Escherichia coli]]
		+	[[Category: Protein complex]]
		+	[[Category: Borovinskaya, M A.]]
		+	[[Category: Cate, J H.D.]]
		+	[[Category: Fredrick, K.]]
		+	[[Category: Shoji, S.]]
		+	[[Category: Ribosome]]
		+	[[Category: Rna-protein complex]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 20 12:06:08 2008''

OCA at 10:40, 13 August 2008

OCA — Wed, 13 Aug 2008 10:40:23 GMT

←Older revision		Revision as of 10:40, 13 August 2008
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3df3 is ON HOLD	+	The entry 3df3 is ON HOLD until Paper Publication

	Authors: Borovinskaya, M.A., Shoji, S., Fredrick, K., Cate, J.H.D.		Authors: Borovinskaya, M.A., Shoji, S., Fredrick, K., Cate, J.H.D.
Line 7:		Line 7:
	Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.		Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Fri Jul 11~~ 13:06:58 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 13 13:40:22 2008''

OCA: New page: '''Unreleased structure''' The entry 3df3 is ON HOLD Authors: Borovinskaya, M.A., Shoji, S., Fredrick, K., Cate, J.H.D. Description: Crystal structure of the bacterial ribosome from Es...

OCA — Fri, 11 Jul 2008 10:06:58 GMT

New page: '''Unreleased structure''' The entry 3df3 is ON HOLD Authors: Borovinskaya, M.A., Shoji, S., Fredrick, K., Cate, J.H.D. Description: Crystal structure of the bacterial ribosome from Es...

New page

'''Unreleased structure'''

The entry 3df3 is ON HOLD

Authors: Borovinskaya, M.A., Shoji, S., Fredrick, K., Cate, J.H.D.

Description: Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. This file contains the 30S subunit of the second 70S ribosome, with hygromycin B bound. The entire crystal structure contains two 70S ribosomes.

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Jul 11 13:06:58 2008''