3dnj - Revision history

OCA at 09:42, 21 February 2024

OCA — Wed, 21 Feb 2024 09:42:16 GMT

←Older revision		Revision as of 09:42, 21 February 2024
Line 10:		Line 10:
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/CLPS_CAUVC CLPS_CAUVC] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.[HAMAP-Rule:MF_00302]		[https://www.uniprot.org/uniprot/CLPS_CAUVC CLPS_CAUVC] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.[HAMAP-Rule:MF_00302]
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The N-end rule targets specific proteins for destruction in prokaryotes and eukaryotes. Here, we report a crystal structure of a bacterial N-end rule adaptor, ClpS, bound to a peptide mimic of an N-end rule substrate. This structure, which was solved at a resolution of 1.15 A, reveals specific recognition of the peptide alpha-amino group via hydrogen bonding and shows that the peptide's N-terminal tyrosine side chain is buried in a deep hydrophobic cleft that pre-exists on the surface of ClpS. The adaptor side chains that contact the peptide's N-terminal residue are highly conserved in orthologs and in E3 ubiquitin ligases that mediate eukaryotic N-end rule recognition. We show that mutation of critical ClpS contact residues abrogates substrate delivery to and degradation by the AAA+ protease ClpAP, demonstrate that modification of the hydrophobic pocket results in altered N-end rule specificity, and discuss functional implications for the mechanism of substrate delivery.
-
-	The molecular basis of N-end rule recognition.,Wang KH, Roman-Hernandez G, Grant RA, Sauer RT, Baker TA Mol Cell. 2008 Nov 7;32(3):406-14. PMID:18995838<ref>PMID:18995838</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 3dnj" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
	*[[ATP-dependent Clp protease adaptor protein 3D structures\|ATP-dependent Clp protease adaptor protein 3D structures]]		*[[ATP-dependent Clp protease adaptor protein 3D structures\|ATP-dependent Clp protease adaptor protein 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:19, 15 November 2023

OCA — Wed, 15 Nov 2023 12:19:43 GMT

←Older revision		Revision as of 12:19, 15 November 2023
Line 3:		Line 3:
	<StructureSection load='3dnj' size='340' side='right'caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='3dnj' size='340' side='right'caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Cauce Cauce~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.15Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~clpS, CC_2467 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 CAUCE])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [https://pdbe.org/3dnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [https://www.ebi.ac.uk/pdbsum/3dnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnj ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [https://pdbe.org/3dnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [https://www.ebi.ac.uk/pdbsum/3dnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~CLPS_CAUCR CLPS_CAUCR]~~] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation ~~(By similarity)~~.	+	[https://www.uniprot.org/uniprot/CLPS_CAUVC CLPS_CAUVC] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.[HAMAP-Rule:MF_00302]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 26:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cauce~~]]	+	[[Category: Caulobacter vibrioides]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Baker~~, T A~~]]	+	[[Category: Baker TA]]
-	[[Category: Grant~~, R A~~]]	+	[[Category: Grant RA]]
-	[[Category: Roman-Hernandez, G]]	+	[[Category: Roman-Hernandez G]]
-	[[Category: Sauer~~, R T~~]]	+	[[Category: Sauer RT]]
-	[[Category: Wang, K]]	+	[[Category: Wang K]]
-	~~[[Category: Adaptor]]~~	+
-	~~[[Category: Peptide binding protein]]~~	+
-	~~[[Category: Protein-peptide complex~~]]	+

OCA at 08:03, 9 February 2022

OCA — Wed, 09 Feb 2022 08:03:18 GMT

←Older revision		Revision as of 08:03, 9 February 2022
Line 1:		Line 1:

	==The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide==		==The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide==
-	<StructureSection load='3dnj' size='340' side='right' caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>	+	<StructureSection load='3dnj' size='340' side='right'caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Cauce Cauce]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cauce Cauce]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpS, CC_2467 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 CAUCE])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpS, CC_2467 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 CAUCE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [~~http~~://pdbe.org/3dnj PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3dnj PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnj ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [https://pdbe.org/3dnj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [https://www.ebi.ac.uk/pdbsum/3dnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/CLPS_CAUCR CLPS_CAUCR]] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (By similarity).	+	[[https://www.uniprot.org/uniprot/CLPS_CAUCR CLPS_CAUCR]] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 19:
	</div>		</div>
	<div class="pdbe-citations 3dnj" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3dnj" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[ATP-dependent Clp protease adaptor protein 3D structures\|ATP-dependent Clp protease adaptor protein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 24:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Cauce]]		[[Category: Cauce]]
		+	[[Category: Large Structures]]
	[[Category: Baker, T A]]		[[Category: Baker, T A]]
	[[Category: Grant, R A]]		[[Category: Grant, R A]]

OCA at 23:20, 4 August 2016

OCA — Thu, 04 Aug 2016 23:20:22 GMT

←Older revision		Revision as of 23:20, 4 August 2016
Line 1:		Line 1:
		+
	==The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide==		==The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide==
	<StructureSection load='3dnj' size='340' side='right' caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='3dnj' size='340' side='right' caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Caulobacter_vibrioides Caulobacter vibrioides~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cauce Cauce]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpS, CC_2467 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 ~~Caulobacter vibrioides~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpS, CC_2467 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 CAUCE])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [http://www.ebi.ac.uk/pdbsum/3dnj PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [http://pdbe.org/3dnj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [http://www.ebi.ac.uk/pdbsum/3dnj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnj ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3dnj" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Caulobacter vibrioides~~]]	+	[[Category: Cauce]]
	[[Category: Baker, T A]]		[[Category: Baker, T A]]
	[[Category: Grant, R A]]		[[Category: Grant, R A]]

OCA at 20:37, 24 December 2014

OCA — Wed, 24 Dec 2014 20:37:36 GMT

←Older revision		Revision as of 20:37, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [http://www.ebi.ac.uk/pdbsum/3dnj PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [http://www.ebi.ac.uk/pdbsum/3dnj PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CLPS_CAUCR CLPS_CAUCR]] Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (By similarity).
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:55, 12 November 2014

OCA — Wed, 12 Nov 2014 07:55:06 GMT

←Older revision		Revision as of 07:55, 12 November 2014
Line 1:		Line 1:
-	[[~~Image:~~3dnj.~~png~~\|~~left~~\|~~200px~~]]	+	==The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide==
		+	<StructureSection load='3dnj' size='340' side='right' caption='[[3dnj]], [[Resolution\|resolution]] 1.15Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3dnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DNJ FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">clpS, CC_2467 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=155892 Caulobacter vibrioides])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dnj RCSB], [http://www.ebi.ac.uk/pdbsum/3dnj PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The N-end rule targets specific proteins for destruction in prokaryotes and eukaryotes. Here, we report a crystal structure of a bacterial N-end rule adaptor, ClpS, bound to a peptide mimic of an N-end rule substrate. This structure, which was solved at a resolution of 1.15 A, reveals specific recognition of the peptide alpha-amino group via hydrogen bonding and shows that the peptide's N-terminal tyrosine side chain is buried in a deep hydrophobic cleft that pre-exists on the surface of ClpS. The adaptor side chains that contact the peptide's N-terminal residue are highly conserved in orthologs and in E3 ubiquitin ligases that mediate eukaryotic N-end rule recognition. We show that mutation of critical ClpS contact residues abrogates substrate delivery to and degradation by the AAA+ protease ClpAP, demonstrate that modification of the hydrophobic pocket results in altered N-end rule specificity, and discuss functional implications for the mechanism of substrate delivery.

-	~~{{STRUCTURE_3dnj\| PDB=3dnj \| SCENE= }}~~	+	The molecular basis of N-end rule recognition.,Wang KH, Roman-Hernandez G, Grant RA, Sauer RT, Baker TA Mol Cell. 2008 Nov 7;32(3):406-14. PMID:18995838<ref>PMID:18995838</ref>

-	~~===The structure~~ of the ~~Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18995838}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[3dnj]] is a 4 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA].~~	+	</StructureSection>
	[[Category: Caulobacter vibrioides]]		[[Category: Caulobacter vibrioides]]
-	[[Category: Baker, T A.]]	+	[[Category: Baker, T A]]
-	[[Category: Grant, R A.]]	+	[[Category: Grant, R A]]
-	[[Category: Roman-Hernandez, G.]]	+	[[Category: Roman-Hernandez, G]]
-	[[Category: Sauer, R T.]]	+	[[Category: Sauer, R T]]
-	[[Category: Wang, K.]]	+	[[Category: Wang, K]]
	[[Category: Adaptor]]		[[Category: Adaptor]]
	[[Category: Peptide binding protein]]		[[Category: Peptide binding protein]]
	[[Category: Protein-peptide complex]]		[[Category: Protein-peptide complex]]

OCA: Protected "3dnj" [edit=sysop:move=sysop]

OCA — Mon, 07 Jan 2013 21:32:22 GMT

Protected "3dnj" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:32, 7 January 2013

OCA at 21:32, 7 January 2013

OCA — Mon, 07 Jan 2013 21:32:16 GMT

←Older revision		Revision as of 21:32, 7 January 2013
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:3dnj.png\|left\|200px]]
-	[[Image:3dnj.~~jpg~~\|left\|200px]]	+

-	<!--
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	{{STRUCTURE_3dnj\| PDB=3dnj \| SCENE= }}		{{STRUCTURE_3dnj\| PDB=3dnj \| SCENE= }}

	===The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide===		===The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide===

-
-	<!--
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	{{ABSTRACT_PUBMED_18995838}}		{{ABSTRACT_PUBMED_18995838}}

	==About this Structure==		==About this Structure==
-	~~3DNJ~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA].	+	[[3dnj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA].
-		+
-	~~==Reference==~~	+
-	~~The molecular basis of N-end rule recognition., Wang KH, Roman-Hernandez G, Grant RA, Sauer RT, Baker TA, Mol Cell. 2008 Nov 7;32(3):406-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18995838 18995838]~~	+
	[[Category: Caulobacter vibrioides]]		[[Category: Caulobacter vibrioides]]
	[[Category: Baker, T A.]]		[[Category: Baker, T A.]]
Line 33:		Line 18:
	[[Category: Peptide binding protein]]		[[Category: Peptide binding protein]]
	[[Category: Protein-peptide complex]]		[[Category: Protein-peptide complex]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 20 07:45:00 2008''

OCA at 05:45, 20 November 2008

OCA — Thu, 20 Nov 2008 05:45:03 GMT

←Older revision		Revision as of 05:45, 20 November 2008
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3dnj.jpg\|left\|200px]]

-	The ~~entry 3dnj~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3dnj", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3dnj\| PDB=3dnj \| SCENE= }}

-	~~Authors: Wang, K., Roman~~-~~Hernandez, G., Grant, R.A., Sauer, R.T., Baker, T.A.~~	+	===The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide===

-	Description: The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Aug 6 12~~:28:27 2008''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_18995838}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 18995838 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_18995838}}
		+
		+	==About this Structure==
		+	3DNJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Caulobacter_vibrioides Caulobacter vibrioides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNJ OCA].
		+
		+	==Reference==
		+	The molecular basis of N-end rule recognition., Wang KH, Roman-Hernandez G, Grant RA, Sauer RT, Baker TA, Mol Cell. 2008 Nov 7;32(3):406-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18995838 18995838]
		+	[[Category: Caulobacter vibrioides]]
		+	[[Category: Baker, T A.]]
		+	[[Category: Grant, R A.]]
		+	[[Category: Roman-Hernandez, G.]]
		+	[[Category: Sauer, R T.]]
		+	[[Category: Wang, K.]]
		+	[[Category: Adaptor]]
		+	[[Category: Peptide binding protein]]
		+	[[Category: Protein-peptide complex]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 20 07:45:00 2008''

OCA at 09:28, 6 August 2008

OCA — Wed, 06 Aug 2008 09:28:27 GMT

←Older revision		Revision as of 09:28, 6 August 2008
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3dnj is ON HOLD	+	The entry 3dnj is ON HOLD until Paper Publication

	Authors: Wang, K., Roman-Hernandez, G., Grant, R.A., Sauer, R.T., Baker, T.A.		Authors: Wang, K., Roman-Hernandez, G., Grant, R.A., Sauer, R.T., Baker, T.A.

-	Description: The ~~Molecular Basis~~ of N-end ~~Rule Recognition~~	+	Description: The structure of the Caulobacter crescentus ClpS protease adaptor protein in complex with a N-end rule peptide

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul 23~~ 12:15:33 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 6 12:28:27 2008''