3drh - Revision history

OCA at 15:13, 1 November 2023

OCA — Wed, 01 Nov 2023 15:13:33 GMT

←Older revision		Revision as of 15:13, 1 November 2023
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	<StructureSection load='3drh' size='340' side='right'caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='3drh' size='340' side='right'caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3drh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Laclm Laclm~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3drh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._cremoris_MG1363 Lactococcus lactis subsp. cremoris MG1363]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRH FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">oppA, llmg_0701 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=416870 LACLM])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [https://pdbe.org/3drh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [https://www.ebi.ac.uk/pdbsum/3drh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drh ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [https://pdbe.org/3drh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [https://www.ebi.ac.uk/pdbsum/3drh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drh ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A2RJ53_LACLM A2RJ53_LACLM]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Laclm~~]]	+	[[Category: Lactococcus lactis subsp. cremoris MG1363]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Berntsson~~, R P.~~A]]	+	[[Category: Berntsson RP-A]]
-	[[Category: Doeven~~, M K~~]]	+	[[Category: Doeven MK]]
-	[[Category: Duurkens~~, R H~~]]	+	[[Category: Duurkens RH]]
-	[[Category: Marrink, S J]]	+	[[Category: Marrink S-J]]
-	[[Category: Poolman, B]]	+	[[Category: Poolman B]]
-	[[Category: Sengupta, D]]	+	[[Category: Sengupta D]]
-	[[Category: Slotboom, D J]]	+	[[Category: Slotboom D-J]]
-	[[Category: Thunnissen, A M]]	+	[[Category: Thunnissen A-M]]
-	~~[[Category: Oligo-peptide binding]]~~	+
-	~~[[Category: Peptide binding protein]]~~	+
-	~~[[Category: Venus fly-trap]]~~	+
-	~~[[Category: Voluminous binding cavity~~]]	+

OCA at 08:06, 9 February 2022

OCA — Wed, 09 Feb 2022 08:06:12 GMT

←Older revision		Revision as of 08:06, 9 February 2022
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	==Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation==		==Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation==
-	<StructureSection load='3drh' size='340' side='right' caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>	+	<StructureSection load='3drh' size='340' side='right'caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3drh]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3DRH FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3drh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DRH FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [~~http~~://pdbe.org/3drh PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3drh PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3drh ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [https://pdbe.org/3drh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [https://www.ebi.ac.uk/pdbsum/3drh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3drh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 29:		Line 29:

	==See Also==		==See Also==
-	*[[~~Oligopeptide-binding protein~~\|~~Oligopeptide-binding protein~~]]	+	*[[ABC transporter 3D structures\|ABC transporter 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 35:		Line 35:
	</StructureSection>		</StructureSection>
	[[Category: Laclm]]		[[Category: Laclm]]
		+	[[Category: Large Structures]]
	[[Category: Berntsson, R P.A]]		[[Category: Berntsson, R P.A]]
	[[Category: Doeven, M K]]		[[Category: Doeven, M K]]

OCA at 09:15, 14 November 2018

OCA — Wed, 14 Nov 2018 09:15:44 GMT

←Older revision		Revision as of 09:15, 14 November 2018
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drh_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drh_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 02:37, 5 August 2016

OCA — Fri, 05 Aug 2016 02:37:34 GMT

←Older revision		Revision as of 02:37, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation==		==Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation==
	<StructureSection load='3drh' size='340' side='right' caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='3drh' size='340' side='right' caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>
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	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [http://www.ebi.ac.uk/pdbsum/3drh PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [http://pdbe.org/3drh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [http://www.ebi.ac.uk/pdbsum/3drh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3drh ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3drh ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3drh" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 16:16, 21 December 2014

OCA — Sun, 21 Dec 2014 16:16:16 GMT

←Older revision		Revision as of 16:16, 21 December 2014
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-	~~{{STRUCTURE_3drh\| PDB=3drh \| SCENE= }}~~	+	==Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation==
-	===Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation===	+	<StructureSection load='3drh' size='340' side='right' caption='[[3drh]], [[Resolution\|resolution]] 1.70Å' scene=''>
-	~~{{ABSTRACT_PUBMED_19300437}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3drh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DRH FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3drf\|3drf]], [[3drg\|3drg]], [[3dri\|3dri]], [[3drj\|3drj]], [[3drk\|3drk]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">oppA, llmg_0701 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=416870 LACLM])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3drh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3drh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3drh RCSB], [http://www.ebi.ac.uk/pdbsum/3drh PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3drh_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Oligopeptide-binding protein A (OppA) from Lactococcus lactis binds peptides of an exceptionally wide range of lengths (4-35 residues), with no apparent sequence preference. Here, we present the crystal structures of OppA in the open- and closed-liganded conformations. The structures directly explain the protein's phenomenal promiscuity. A huge cavity allows binding of very long peptides, and a lack of constraints for the position of the N and C termini of the ligand is compatible with binding of peptides with varying lengths. Unexpectedly, the peptide's amino-acid composition (but not the exact sequence) appears to have a function in selection, with a preference for proline-rich peptides containing at least one isoleucine. These properties can be related to the physiology of the organism: L. lactis is auxotrophic for branched chain amino acids and favours proline-rich caseins as a source of amino acids. We propose a new mechanism for peptide selection based on amino-acid composition rather than sequence.

-	~~==About this Structure==~~	+	The structural basis for peptide selection by the transport receptor OppA.,Berntsson RP, Doeven MK, Fusetti F, Duurkens RH, Sengupta D, Marrink SJ, Thunnissen AM, Poolman B, Slotboom DJ EMBO J. 2009 Mar 19. PMID:19300437<ref>PMID:19300437</ref>
-	~~[[3drh]] is a 2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Laclm Laclm]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=3DRH OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Oligopeptide-binding protein\|Oligopeptide-binding protein]]		*[[Oligopeptide-binding protein\|Oligopeptide-binding protein]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	~~<ref group="xtra">PMID:019300437</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Laclm]]		[[Category: Laclm]]
-	[[Category: Berntsson, R P.A.]]	+	[[Category: Berntsson, R P.A]]
-	[[Category: Doeven, M K.]]	+	[[Category: Doeven, M K]]
-	[[Category: Duurkens, R H.]]	+	[[Category: Duurkens, R H]]
-	[[Category: Marrink, S J.]]	+	[[Category: Marrink, S J]]
-	[[Category: Poolman, B.]]	+	[[Category: Poolman, B]]
-	[[Category: Sengupta, D.]]	+	[[Category: Sengupta, D]]
-	[[Category: Slotboom, D J.]]	+	[[Category: Slotboom, D J]]
-	[[Category: Thunnissen, A M.]]	+	[[Category: Thunnissen, A M]]
	[[Category: Oligo-peptide binding]]		[[Category: Oligo-peptide binding]]
	[[Category: Peptide binding protein]]		[[Category: Peptide binding protein]]
	[[Category: Venus fly-trap]]		[[Category: Venus fly-trap]]
	[[Category: Voluminous binding cavity]]		[[Category: Voluminous binding cavity]]

OCA at 07:43, 5 February 2014

OCA — Wed, 05 Feb 2014 07:43:10 GMT

←Older revision		Revision as of 07:43, 5 February 2014
Line 1:		Line 1:
-	[[Image:3drh.png\|left\|200px]]
-
	{{STRUCTURE_3drh\| PDB=3drh \| SCENE= }}		{{STRUCTURE_3drh\| PDB=3drh \| SCENE= }}
-
	===Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation===		===Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation===
-
	{{ABSTRACT_PUBMED_19300437}}		{{ABSTRACT_PUBMED_19300437}}

	==About this Structure==		==About this Structure==
-	[[3drh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Lactococcus_lactis Lactococcus lactis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].	+	[[3drh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laclm Laclm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].

	==See Also==		==See Also==
Line 14:		Line 10:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:019300437</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019300437</ref><references group="xtra"/><references/>
-	[[Category: ~~Lactococcus lactis~~]]	+	[[Category: Laclm]]
	[[Category: Berntsson, R P.A.]]		[[Category: Berntsson, R P.A.]]
	[[Category: Doeven, M K.]]		[[Category: Doeven, M K.]]

OCA at 18:10, 20 October 2012

OCA — Sat, 20 Oct 2012 18:10:21 GMT

←Older revision		Revision as of 18:10, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3drh]] is a 2 chain structure ~~of [[Oligopeptide-binding protein]]~~ with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].	+	[[3drh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].

	==See Also==		==See Also==

OCA: Protected "3drh" [edit=sysop:move=sysop]

OCA — Fri, 27 Jul 2012 03:14:51 GMT

Protected "3drh" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:14, 27 July 2012

OCA at 03:14, 27 July 2012

OCA — Fri, 27 Jul 2012 03:14:48 GMT

←Older revision		Revision as of 03:14, 27 July 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3drh.png\|left\|200px]]

-	~~The entry~~ 3drh ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_3drh\| PDB=3drh \| SCENE= }}

-	~~Authors: Berntsson, R.P.~~-~~A., Doeven, M.K., Duurkens, R., Sengupta, D., Marrink, S.~~-~~J., Thunnissen, A.-M., Poolman, B., Slotboom, D.-J.~~	+	===Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation===

-	~~Description: Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation~~	+	{{ABSTRACT_PUBMED_19300437}}

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Thu Apr 9 12~~:15:~~45 2009''~~	+	==About this Structure==
		+	[[3drh]] is a 2 chain structure of [[Oligopeptide-binding protein]] with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].
		+
		+	==See Also==
		+	*[[Oligopeptide-binding protein\|Oligopeptide-binding protein]]
		+
		+	==Reference==
		+	<ref group="xtra">PMID:019300437</ref><references group="xtra"/>
		+	[[Category: Lactococcus lactis]]
		+	[[Category: Berntsson, R P.A.]]
		+	[[Category: Doeven, M K.]]
		+	[[Category: Duurkens, R H.]]
		+	[[Category: Marrink, S J.]]
		+	[[Category: Poolman, B.]]
		+	[[Category: Sengupta, D.]]
		+	[[Category: Slotboom, D J.]]
		+	[[Category: Thunnissen, A M.]]
		+	[[Category: Oligo-peptide binding]]
		+	[[Category: Peptide binding protein]]
		+	[[Category: Venus fly-trap]]
		+	[[Category: Voluminous binding cavity]]

OCA at 09:15, 9 April 2009

OCA — Thu, 09 Apr 2009 09:15:45 GMT

←Older revision		Revision as of 09:15, 9 April 2009
Line 1:		Line 1:
-	~~{{Seed}}~~	+	'''Unreleased structure'''
-	~~[[Image:3drh.jpg\|left\|200px]]~~	+

-	~~<!--~~	+	The entry 3drh is ON HOLD until Paper Publication
-	The ~~line below this paragraph, containing "STRUCTURE_3drh", creates the "Structure Box" on the page.~~	+
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page~~ is ~~loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	~~-->~~	+
-	~~{{STRUCTURE_3drh\| PDB=3drh \| SCENE=~~ }}	+

-	~~===Crystal structure of Lactococcal OppA co~~-~~crystallized with Leu~~-~~enkephalin in an open conformation===~~	+	Authors: Berntsson, R.P.-A., Doeven, M.K., Duurkens, R., Sengupta, D., Marrink, S.-J., Thunnissen, A.-M., Poolman, B., Slotboom, D.-J.

		+	Description: Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation

-	~~<!--~~	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 9 12:15:45 2009''
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_19300437}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at http://www.pubmed.gov), where 19300437 is the PubMed ID number.~~	+
-	~~-->~~	+
-	~~{{ABSTRACT_PUBMED_19300437}}~~	+
-		+
-	~~==About this Structure==~~	+
-	3DRH is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DRH OCA].	+
-		+
-	~~==Reference==~~	+
-	~~<ref group="xtra">PMID:19300437</ref><references group="xtra"/>~~	+
-	~~[[Category: Lactococcus lactis]]~~	+
-	~~[[Category: Berntsson, R P.A.]]~~	+
-	~~[[Category: Doeven, M K.]]~~	+
-	~~[[Category: Duurkens, R H.]]~~	+
-	~~[[Category: Marrink, S J.]]~~	+
-	~~[[Category: Poolman, B.]]~~	+
-	~~[[Category: Sengupta, D.]]~~	+
-	~~[[Category: Slotboom, D J.]]~~	+
-	~~[[Category: Thunnissen, A M.]]~~	+
-	~~[[Category: Oligo-peptide binding]]~~	+
-	~~[[Category: Peptide binding protein]]~~	+
-	~~[[Category: Venus fly-trap]]~~	+
-	~~[[Category: Voluminous binding cavity]]~~	+
-		+
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr ~~2 15~~:25:04 2009''	+