3ewg - Revision history

OCA at 15:23, 1 November 2023

OCA — Wed, 01 Nov 2023 15:23:32 GMT

←Older revision		Revision as of 15:23, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3ewg' size='340' side='right'caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>		<StructureSection load='3ewg' size='340' side='right'caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_43067 Atcc 43067~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EWG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EWG FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=DIO:1~~,~~4-DIETHYLENE+DIOXIDE'>DIO</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.04Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~NusG ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [https://pdbe.org/3ewg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [https://www.ebi.ac.uk/pdbsum/3ewg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewg ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [https://pdbe.org/3ewg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [https://www.ebi.ac.uk/pdbsum/3ewg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/SPT5_METJA SPT5_METJA]] Stimulates transcription elongation.[HAMAP-Rule:MF_00950]<ref>PMID:20197319</ref>	+	[https://www.uniprot.org/uniprot/SPT5_METJA SPT5_METJA] Stimulates transcription elongation.[HAMAP-Rule:MF_00950]<ref>PMID:20197319</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 43067]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Gao, Y X~~]]	+	[[Category: Methanocaldococcus jannaschii]]
-	[[Category: ~~Liu, Q~~]]	+	[[Category: Gao YX]]
-	[[Category: ~~Niu, L W~~]]	+	[[Category: Liu Q]]
-	[[Category: ~~Teng, M K~~]]	+	[[Category: Niu LW]]
-	[[Category: ~~Zhou, H H~~]]	+	[[Category: Teng MK]]
-	[[Category: ~~Alpha/beta structure]]~~	+	[[Category: Zhou HH]]
-	~~[[Category: Antiparallel beta sheet]]~~	+
-	~~[[Category: Flanked alpha helice]]~~	+
-	~~[[Category: Transcription~~]]	+

OCA at 09:18, 23 February 2022

OCA — Wed, 23 Feb 2022 09:18:05 GMT

←Older revision		Revision as of 09:18, 23 February 2022
Line 1:		Line 1:

	==Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii==		==Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii==
-	<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>	+	<StructureSection load='3ewg' size='340' side='right'caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3EWG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EWG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [~~http~~://pdbe.org/3ewg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ewg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewg ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [https://pdbe.org/3ewg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [https://www.ebi.ac.uk/pdbsum/3ewg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/SPT5_METJA SPT5_METJA]] Stimulates transcription elongation.[HAMAP-Rule:MF_00950]<ref>PMID:20197319</ref>	+	[[https://www.uniprot.org/uniprot/SPT5_METJA SPT5_METJA]] Stimulates transcription elongation.[HAMAP-Rule:MF_00950]<ref>PMID:20197319</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 43067]]		[[Category: Atcc 43067]]
		+	[[Category: Large Structures]]
	[[Category: Gao, Y X]]		[[Category: Gao, Y X]]
	[[Category: Liu, Q]]		[[Category: Liu, Q]]

OCA at 21:36, 2 December 2018

OCA — Sun, 02 Dec 2018 21:36:30 GMT

←Older revision		Revision as of 21:36, 2 December 2018
Line 1:		Line 1:
		+
	==Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii==		==Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii==
	<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>		<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://pdbe.org/3ewg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://pdbe.org/3ewg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ewg ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/3ewg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/3ewg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 11:08, 8 February 2016

OCA — Mon, 08 Feb 2016 11:08:30 GMT

←Older revision		Revision as of 11:08, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>		<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Methanocaldococcus_jannaschii Methanocaldococcus jannaschii~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EWG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EWG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ~~Methanocaldococcus jannaschii~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://pdbe.org/3ewg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~NUSG_METJA NUSG_METJA~~]] Stimulates transcription elongation.<ref>PMID:20197319</ref>	+	[[http://www.uniprot.org/uniprot/SPT5_METJA SPT5_METJA]] Stimulates transcription elongation.[HAMAP-Rule:MF_00950]<ref>PMID:20197319</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ewg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3ewg" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Methanocaldococcus jannaschii~~]]	+	[[Category: Atcc 43067]]
	[[Category: Gao, Y X]]		[[Category: Gao, Y X]]
	[[Category: Liu, Q]]		[[Category: Liu, Q]]

OCA at 22:52, 24 December 2014

OCA — Wed, 24 Dec 2014 22:52:51 GMT

←Older revision		Revision as of 22:52, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NUSG_METJA NUSG_METJA]] Stimulates transcription elongation.<ref>PMID:20197319</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 08:49, 26 November 2014

OCA — Wed, 26 Nov 2014 08:49:15 GMT

←Older revision		Revision as of 08:49, 26 November 2014
Line 1:		Line 1:
-	[[~~Image:~~3ewg.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii==
		+	<StructureSection load='3ewg' size='340' side='right' caption='[[3ewg]], [[Resolution\|resolution]] 2.04Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ewg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EWG FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NusG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 Methanocaldococcus jannaschii])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ewg RCSB], [http://www.ebi.ac.uk/pdbsum/3ewg PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/3ewg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Transcription in archaea employs a eukaryotic-type transcription apparatus but uses bacterial-type transcription factors. NusG is one of the few archaeal transcription factors whose orthologs are essential in both bacteria and eukaryotes. Archaeal NusG is composed of only an NusG N-terminal (NGN) domain and a KOW domain, which is similar to bacterial NusG but not to the eukaryotic ortholog, Spt5. However, archaeal NusG was confirmed recently to form a complex with rpoE'' that was similar to the Spt5-Spt4 complex. Thus, archaeal NusG presents hybrid features of Spt5 and bacterial NusG. Here we report the crystal structure of NGN from the archaea Methanocaldococcus jannaschii (MjNGN). MjNGN folds to an alpha-beta-alpha sandwich without the appendant domain of bacterial NGNs, and forms a unique homodimer in crystal and solution. MjNGN alone was found to be sufficient for rpoE'' binding and an MjNGN-rpoE'' model has been constructed by rigid docking. Proteins 2009. (c) 2009 Wiley-Liss, Inc.

-	~~{{STRUCTURE_3ewg\| PDB=3ewg \| SCENE= }}~~	+	Crystal structure of NusG N-terminal (NGN) domain from Methanocaldococcus jannaschii and its interaction with rpoE'',Zhou H, Liu Q, Gao Y, Teng M, Niu L Proteins. 2009 Apr 28. PMID:19475703<ref>PMID:19475703</ref>

-	~~===Crystal structure~~ of the ~~N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_19475703}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3ewg]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:019475703<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
-	[[Category: Gao, Y X.]]	+	[[Category: Gao, Y X]]
-	[[Category: Liu, Q.]]	+	[[Category: Liu, Q]]
-	[[Category: Niu, L W.]]	+	[[Category: Niu, L W]]
-	[[Category: Teng, M K.]]	+	[[Category: Teng, M K]]
-	[[Category: Zhou, H H.]]	+	[[Category: Zhou, H H]]
	[[Category: Alpha/beta structure]]		[[Category: Alpha/beta structure]]
	[[Category: Antiparallel beta sheet]]		[[Category: Antiparallel beta sheet]]
	[[Category: Flanked alpha helice]]		[[Category: Flanked alpha helice]]
	[[Category: Transcription]]		[[Category: Transcription]]

OCA: Protected "3ewg" [edit=sysop:move=sysop]

OCA — Wed, 06 Feb 2013 13:35:29 GMT

Protected "3ewg" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:35, 6 February 2013

OCA at 13:35, 6 February 2013

OCA — Wed, 06 Feb 2013 13:35:26 GMT

←Older revision		Revision as of 13:35, 6 February 2013
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-	{{Seed}}
	[[Image:3ewg.png\|left\|200px]]		[[Image:3ewg.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ewg", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ewg\| PDB=3ewg \| SCENE= }}		{{STRUCTURE_3ewg\| PDB=3ewg \| SCENE= }}

	===Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii===		===Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_19475703}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 19475703 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_19475703}}		{{ABSTRACT_PUBMED_19475703}}

	==About this Structure==		==About this Structure==
-	~~3EWG~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA].	+	[[3ewg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19475703~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019475703</ref><references group="xtra"/>
	[[Category: Methanocaldococcus jannaschii]]		[[Category: Methanocaldococcus jannaschii]]
	[[Category: Gao, Y X.]]		[[Category: Gao, Y X.]]
Line 34:		Line 22:
	[[Category: Flanked alpha helice]]		[[Category: Flanked alpha helice]]
	[[Category: Transcription]]		[[Category: Transcription]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 08:22:21 2009''

OCA at 05:22, 25 June 2009

OCA — Thu, 25 Jun 2009 05:22:23 GMT

←Older revision		Revision as of 05:22, 25 June 2009
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3ewg.~~jpg~~\|left\|200px]]	+	[[Image:3ewg.png\|left\|200px]]

	<!--		<!--
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	[[Category: Transcription]]		[[Category: Transcription]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed~~ Jun ~~17 10~~:07:20 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jun 25 08:22:21 2009''

OCA at 07:07, 17 June 2009

OCA — Wed, 17 Jun 2009 07:07:27 GMT

←Older revision		Revision as of 07:07, 17 June 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ewg.jpg\|left\|200px]]

-	The ~~entry 3ewg~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ewg", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ewg\| PDB=3ewg \| SCENE= }}

-	~~Authors: Liu, Q., Zhou, H.H., Gao, Y.X., Teng, M.K., Niu, L.W.~~	+	===Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii===

-	Description: Crystal structure of the N-terminal domain of NusG (NGN) from Methanocaldococcus jannaschii

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Oct 29~~ 10:29:~~36 2008~~''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_19475703}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 19475703 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_19475703}}
		+
		+	==About this Structure==
		+	3EWG is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWG OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:19475703</ref><references group="xtra"/>
		+	[[Category: Methanocaldococcus jannaschii]]
		+	[[Category: Gao, Y X.]]
		+	[[Category: Liu, Q.]]
		+	[[Category: Niu, L W.]]
		+	[[Category: Teng, M K.]]
		+	[[Category: Zhou, H H.]]
		+	[[Category: Alpha/beta structure]]
		+	[[Category: Antiparallel beta sheet]]
		+	[[Category: Flanked alpha helice]]
		+	[[Category: Transcription]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 10:07:20 2009''